Coexpression cluster: Cluster_9 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003735 structural constituent of ribosome 26.47% (27/102) 4.74 0.0 0.0
GO:0006412 translation 25.49% (26/102) 4.72 0.0 0.0
GO:0043043 peptide biosynthetic process 25.49% (26/102) 4.69 0.0 0.0
GO:0005198 structural molecule activity 26.47% (27/102) 4.53 0.0 0.0
GO:0006518 peptide metabolic process 25.49% (26/102) 4.61 0.0 0.0
GO:0005840 ribosome 24.51% (25/102) 4.76 0.0 0.0
GO:0043604 amide biosynthetic process 25.49% (26/102) 4.58 0.0 0.0
GO:0043603 amide metabolic process 25.49% (26/102) 4.42 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 24.51% (25/102) 4.37 0.0 0.0
GO:0043228 non-membrane-bounded organelle 24.51% (25/102) 4.37 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 29.41% (30/102) 3.69 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 27.45% (28/102) 3.78 0.0 0.0
GO:0009059 macromolecule biosynthetic process 26.47% (27/102) 3.84 0.0 0.0
GO:1901576 organic substance biosynthetic process 31.37% (32/102) 3.0 0.0 0.0
GO:0044249 cellular biosynthetic process 30.39% (31/102) 3.08 0.0 0.0
GO:0044391 ribosomal subunit 12.75% (13/102) 5.88 0.0 0.0
GO:0009058 biosynthetic process 31.37% (32/102) 2.88 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 33.33% (34/102) 2.72 0.0 0.0
GO:0043229 intracellular organelle 25.49% (26/102) 3.23 0.0 0.0
GO:0043226 organelle 25.49% (26/102) 3.23 0.0 0.0
GO:0015934 large ribosomal subunit 9.8% (10/102) 6.22 0.0 0.0
GO:1990904 ribonucleoprotein complex 12.75% (13/102) 4.69 0.0 0.0
GO:0005575 cellular_component 38.24% (39/102) 1.92 0.0 0.0
GO:0044237 cellular metabolic process 41.18% (42/102) 1.75 0.0 0.0
GO:0006807 nitrogen compound metabolic process 41.18% (42/102) 1.64 0.0 0.0
GO:0019538 protein metabolic process 32.35% (33/102) 1.96 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 35.29% (36/102) 1.78 0.0 0.0
GO:0032991 protein-containing complex 20.59% (21/102) 2.68 0.0 0.0
GO:0044238 primary metabolic process 44.12% (45/102) 1.46 0.0 0.0
GO:0043170 macromolecule metabolic process 36.27% (37/102) 1.63 0.0 0.0
GO:0009987 cellular process 47.06% (48/102) 1.28 0.0 0.0
GO:0110165 cellular anatomical entity 28.43% (29/102) 1.91 0.0 0.0
GO:0071704 organic substance metabolic process 44.12% (45/102) 1.34 0.0 0.0
GO:0008152 metabolic process 44.12% (45/102) 1.25 0.0 0.0
GO:0008150 biological_process 56.86% (58/102) 0.81 0.0 3e-06
GO:0003674 molecular_function 70.59% (72/102) 0.53 8e-06 8.2e-05
GO:0046982 protein heterodimerization activity 4.9% (5/102) 4.08 1.2e-05 0.000125
GO:0008017 microtubule binding 4.9% (5/102) 4.06 1.3e-05 0.000128
GO:0007018 microtubule-based movement 3.92% (4/102) 4.66 2e-05 0.000189
GO:0015631 tubulin binding 4.9% (5/102) 3.91 2.2e-05 0.000201
GO:0003777 microtubule motor activity 3.92% (4/102) 4.6 2.3e-05 0.000208
GO:0003774 cytoskeletal motor activity 3.92% (4/102) 4.3 5.3e-05 0.00046
GO:0000786 nucleosome 3.92% (4/102) 4.3 5.3e-05 0.00046
GO:0032993 protein-DNA complex 3.92% (4/102) 4.24 6.3e-05 0.000532
GO:0015935 small ribosomal subunit 2.94% (3/102) 5.11 8.9e-05 0.000744
GO:0003676 nucleic acid binding 19.61% (20/102) 1.26 0.0002 0.001624
GO:0008092 cytoskeletal protein binding 4.9% (5/102) 3.12 0.000286 0.002279
GO:0003723 RNA binding 8.82% (9/102) 2.05 0.000331 0.002581
GO:0097159 organic cyclic compound binding 32.35% (33/102) 0.83 0.0004 0.003054
GO:0007017 microtubule-based process 3.92% (4/102) 3.47 0.000489 0.003655
GO:0022625 cytosolic large ribosomal subunit 1.96% (2/102) 5.22 0.001312 0.009619
GO:0032506 cytokinetic process 0.98% (1/102) 8.39 0.002989 0.01996
GO:1902407 assembly of actomyosin apparatus involved in mitotic cytokinesis 0.98% (1/102) 8.39 0.002989 0.01996
GO:0000912 assembly of actomyosin apparatus involved in cytokinesis 0.98% (1/102) 8.39 0.002989 0.01996
GO:0000914 phragmoplast assembly 0.98% (1/102) 8.39 0.002989 0.01996
GO:1902410 mitotic cytokinetic process 0.98% (1/102) 8.39 0.002989 0.01996
GO:1903047 mitotic cell cycle process 1.96% (2/102) 4.58 0.003178 0.020852
GO:0003677 DNA binding 10.78% (11/102) 1.36 0.003646 0.022724
GO:0016776 phosphotransferase activity, phosphate group as acceptor 1.96% (2/102) 4.48 0.003643 0.023093
GO:0019205 nucleobase-containing compound kinase activity 1.96% (2/102) 4.48 0.003643 0.023093
GO:0000796 condensin complex 0.98% (1/102) 7.39 0.005968 0.034878
GO:0004385 guanylate kinase activity 0.98% (1/102) 7.39 0.005968 0.034878
GO:0005664 nuclear origin of replication recognition complex 0.98% (1/102) 7.39 0.005968 0.034878
GO:0004475 mannose-1-phosphate guanylyltransferase (GTP) activity 0.98% (1/102) 7.39 0.005968 0.034878
GO:1901137 carbohydrate derivative biosynthetic process 2.94% (3/102) 3.01 0.006326 0.0364
GO:0055086 nucleobase-containing small molecule metabolic process 3.92% (4/102) 2.44 0.006541 0.037064
GO:1902115 regulation of organelle assembly 0.98% (1/102) 6.8 0.008939 0.047762
GO:1901673 regulation of mitotic spindle assembly 0.98% (1/102) 6.8 0.008939 0.047762
GO:0048830 adventitious root development 0.98% (1/102) 6.8 0.008939 0.047762
GO:0090169 regulation of spindle assembly 0.98% (1/102) 6.8 0.008939 0.047762
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (102) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms