Coexpression cluster: Cluster_141 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0036094 small molecule binding 25.4% (16/63) 1.47 0.000137 0.007179
GO:1901363 heterocyclic compound binding 25.4% (16/63) 1.48 0.000124 0.007814
GO:0043168 anion binding 25.4% (16/63) 1.52 8.8e-05 0.009211
GO:0008150 biological_process 55.56% (35/63) 0.78 0.000123 0.009697
GO:0000166 nucleotide binding 25.4% (16/63) 1.53 7.9e-05 0.012518
GO:1901265 nucleoside phosphate binding 25.4% (16/63) 1.53 7.9e-05 0.012518
GO:0097367 carbohydrate derivative binding 22.22% (14/63) 1.46 0.000415 0.013075
GO:0032553 ribonucleotide binding 22.22% (14/63) 1.47 0.000376 0.013147
GO:0035639 purine ribonucleoside triphosphate binding 20.63% (13/63) 1.56 0.000348 0.013685
GO:0032555 purine ribonucleotide binding 22.22% (14/63) 1.49 0.000329 0.014819
GO:0017076 purine nucleotide binding 22.22% (14/63) 1.42 0.000536 0.015357
GO:0043167 ion binding 30.16% (19/63) 1.05 0.001185 0.024888
GO:0097159 organic cyclic compound binding 34.92% (22/63) 0.94 0.001153 0.025947
GO:0009987 cellular process 36.51% (23/63) 0.91 0.001133 0.027461
GO:0005488 binding 50.79% (32/63) 0.69 0.001054 0.027657
GO:0030554 adenyl nucleotide binding 19.05% (12/63) 1.32 0.002627 0.028535
GO:0019219 regulation of nucleobase-containing compound metabolic process 12.7% (8/63) 1.74 0.002618 0.029456
GO:0051252 regulation of RNA metabolic process 12.7% (8/63) 1.75 0.002449 0.029676
GO:0050794 regulation of cellular process 15.87% (10/63) 1.48 0.002846 0.029882
GO:0051537 2 iron, 2 sulfur cluster binding 3.17% (2/63) 4.95 0.001919 0.030216
GO:0004672 protein kinase activity 12.7% (8/63) 1.74 0.002606 0.030403
GO:0016310 phosphorylation 12.7% (8/63) 1.75 0.002426 0.030568
GO:0003674 molecular_function 68.25% (43/63) 0.48 0.001562 0.03076
GO:0050789 regulation of biological process 15.87% (10/63) 1.39 0.004329 0.030992
GO:0005524 ATP binding 17.46% (11/63) 1.46 0.00187 0.031002
GO:2001141 regulation of RNA biosynthetic process 12.7% (8/63) 1.76 0.002368 0.031084
GO:0006355 regulation of DNA-templated transcription 12.7% (8/63) 1.76 0.002368 0.031084
GO:0006793 phosphorus metabolic process 14.29% (9/63) 1.5 0.004146 0.031093
GO:0006796 phosphate-containing compound metabolic process 14.29% (9/63) 1.51 0.004068 0.03125
GO:0043412 macromolecule modification 15.87% (10/63) 1.39 0.004314 0.031605
GO:0032559 adenyl ribonucleotide binding 19.05% (12/63) 1.39 0.001718 0.031824
GO:1901564 organonitrogen compound metabolic process 22.22% (14/63) 1.12 0.004052 0.031912
GO:0031326 regulation of cellular biosynthetic process 12.7% (8/63) 1.64 0.003968 0.032052
GO:0009889 regulation of biosynthetic process 12.7% (8/63) 1.64 0.003968 0.032052
GO:0016773 phosphotransferase activity, alcohol group as acceptor 12.7% (8/63) 1.6 0.004605 0.032232
GO:0005968 Rab-protein geranylgeranyltransferase complex 1.59% (1/63) 9.08 0.001846 0.032304
GO:0004788 thiamine diphosphokinase activity 1.59% (1/63) 7.5 0.005528 0.032854
GO:0030975 thiamine binding 1.59% (1/63) 7.5 0.005528 0.032854
GO:0042357 thiamine diphosphate metabolic process 1.59% (1/63) 7.5 0.005528 0.032854
GO:0009229 thiamine diphosphate biosynthetic process 1.59% (1/63) 7.5 0.005528 0.032854
GO:0016301 kinase activity 12.7% (8/63) 1.55 0.005738 0.032862
GO:0005543 phospholipid binding 3.17% (2/63) 4.15 0.005722 0.033376
GO:0010556 regulation of macromolecule biosynthetic process 12.7% (8/63) 1.64 0.003934 0.033493
GO:0006468 protein phosphorylation 12.7% (8/63) 1.77 0.002234 0.033512
GO:0036211 protein modification process 15.87% (10/63) 1.52 0.002347 0.033612
GO:0016772 transferase activity, transferring phosphorus-containing groups 14.29% (9/63) 1.55 0.003347 0.034014
GO:0080090 regulation of primary metabolic process 12.7% (8/63) 1.65 0.003783 0.034049
GO:0010468 regulation of gene expression 12.7% (8/63) 1.64 0.0039 0.034127
GO:0065007 biological regulation 15.87% (10/63) 1.35 0.005221 0.034261
GO:0051171 regulation of nitrogen compound metabolic process 12.7% (8/63) 1.65 0.003718 0.034442
GO:0060255 regulation of macromolecule metabolic process 12.7% (8/63) 1.58 0.005147 0.034497
GO:0031323 regulation of cellular metabolic process 12.7% (8/63) 1.58 0.005085 0.034818
GO:0019222 regulation of metabolic process 12.7% (8/63) 1.56 0.005447 0.035018
GO:0060548 obsolete negative regulation of cell death 1.59% (1/63) 8.08 0.003689 0.035209
GO:0018344 protein geranylgeranylation 1.59% (1/63) 8.08 0.003689 0.035209
GO:0006807 nitrogen compound metabolic process 25.4% (16/63) 0.95 0.006531 0.036739
GO:0071949 FAD binding 3.17% (2/63) 4.04 0.006667 0.036843
GO:0019438 aromatic compound biosynthetic process 6.35% (4/63) 2.37 0.007483 0.040639
GO:0044237 cellular metabolic process 23.81% (15/63) 0.96 0.00818 0.042946
GO:0018130 heterocycle biosynthetic process 6.35% (4/63) 2.34 0.008051 0.042987
GO:0046983 protein dimerization activity 6.35% (4/63) 2.32 0.008446 0.043615
GO:0051540 metal cluster binding 3.17% (2/63) 3.78 0.00943 0.043683
GO:0051536 iron-sulfur cluster binding 3.17% (2/63) 3.78 0.00943 0.043683
GO:0016192 vesicle-mediated transport 4.76% (3/63) 2.84 0.0086 0.043693
GO:0140096 catalytic activity, acting on a protein 15.87% (10/63) 1.22 0.009591 0.043785
GO:0070534 protein K63-linked ubiquitination 1.59% (1/63) 6.76 0.009196 0.043891
GO:0004814 arginine-tRNA ligase activity 1.59% (1/63) 6.76 0.009196 0.043891
GO:0006420 arginyl-tRNA aminoacylation 1.59% (1/63) 6.76 0.009196 0.043891
GO:0071704 organic substance metabolic process 30.16% (19/63) 0.79 0.009074 0.045369
GO:1901362 organic cyclic compound biosynthetic process 6.35% (4/63) 2.21 0.011081 0.049163
GO:0030008 TRAPP complex 1.59% (1/63) 6.5 0.011025 0.049614
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (63) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms