Coexpression cluster: Cluster_149 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0010629 negative regulation of gene expression 5.21% (5/96) 4.49 3e-06 0.001194
GO:0010605 negative regulation of macromolecule metabolic process 5.21% (5/96) 3.63 5.6e-05 0.003152
GO:0009892 negative regulation of metabolic process 5.21% (5/96) 3.63 5.6e-05 0.003152
GO:0009890 negative regulation of biosynthetic process 5.21% (5/96) 3.78 3.3e-05 0.003262
GO:0010558 negative regulation of macromolecule biosynthetic process 5.21% (5/96) 3.78 3.3e-05 0.003262
GO:0031327 negative regulation of cellular biosynthetic process 5.21% (5/96) 3.78 3.3e-05 0.003262
GO:0031324 negative regulation of cellular metabolic process 5.21% (5/96) 3.66 5.1e-05 0.003992
GO:0090304 nucleic acid metabolic process 11.46% (11/96) 1.96 0.000123 0.006065
GO:0048523 negative regulation of cellular process 5.21% (5/96) 3.22 0.000211 0.00923
GO:0048519 negative regulation of biological process 5.21% (5/96) 3.1 0.000306 0.012038
GO:0043933 protein-containing complex organization 5.21% (5/96) 3.0 0.000421 0.015072
GO:0071840 cellular component organization or biogenesis 8.33% (8/96) 2.06 0.000685 0.022487
GO:0045814 negative regulation of gene expression, epigenetic 2.08% (2/96) 5.23 0.001298 0.026912
GO:0031507 heterochromatin formation 2.08% (2/96) 5.23 0.001298 0.026912
GO:0033218 amide binding 2.08% (2/96) 5.23 0.001298 0.026912
GO:0070828 heterochromatin organization 2.08% (2/96) 5.23 0.001298 0.026912
GO:0006139 nucleobase-containing compound metabolic process 11.46% (11/96) 1.61 0.000946 0.028665
GO:0003723 RNA binding 8.33% (8/96) 1.97 0.001025 0.028839
GO:0016043 cellular component organization 7.29% (7/96) 2.05 0.001595 0.029926
GO:0016070 RNA metabolic process 8.33% (8/96) 1.94 0.001157 0.030402
GO:0000956 nuclear-transcribed mRNA catabolic process 2.08% (2/96) 5.08 0.001588 0.031283
GO:0006402 mRNA catabolic process 2.08% (2/96) 4.67 0.002822 0.031767
GO:1901360 organic cyclic compound metabolic process 11.46% (11/96) 1.4 0.002963 0.032427
GO:0010387 COP9 signalosome assembly 1.04% (1/96) 8.47 0.002813 0.032596
GO:1903432 regulation of TORC1 signaling 1.04% (1/96) 8.47 0.002813 0.032596
GO:1902533 positive regulation of intracellular signal transduction 1.04% (1/96) 8.47 0.002813 0.032596
GO:0019789 SUMO transferase activity 1.04% (1/96) 8.47 0.002813 0.032596
GO:0007096 regulation of exit from mitosis 1.04% (1/96) 8.47 0.002813 0.032596
GO:0140719 constitutive heterochromatin formation 1.04% (1/96) 8.47 0.002813 0.032596
GO:0031509 subtelomeric heterochromatin formation 1.04% (1/96) 8.47 0.002813 0.032596
GO:0032006 regulation of TOR signaling 1.04% (1/96) 8.47 0.002813 0.032596
GO:1904263 positive regulation of TORC1 signaling 1.04% (1/96) 8.47 0.002813 0.032596
GO:0032008 positive regulation of TOR signaling 1.04% (1/96) 8.47 0.002813 0.032596
GO:0034641 cellular nitrogen compound metabolic process 12.5% (12/96) 1.3 0.003312 0.035267
GO:0046483 heterocycle metabolic process 11.46% (11/96) 1.48 0.001973 0.035329
GO:0040029 epigenetic regulation of gene expression 2.08% (2/96) 4.83 0.002252 0.038577
GO:0006725 cellular aromatic compound metabolic process 11.46% (11/96) 1.44 0.002388 0.039206
GO:0032991 protein-containing complex 9.38% (9/96) 1.54 0.003849 0.039905
GO:0000338 protein deneddylation 1.04% (1/96) 7.47 0.005618 0.049188
GO:0005786 signal recognition particle, endoplasmic reticulum targeting 1.04% (1/96) 7.47 0.005618 0.049188
GO:0008541 proteasome regulatory particle, lid subcomplex 1.04% (1/96) 7.47 0.005618 0.049188
GO:0001055 RNA polymerase II activity 1.04% (1/96) 7.47 0.005618 0.049188
GO:0030942 endoplasmic reticulum signal peptide binding 1.04% (1/96) 7.47 0.005618 0.049188
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (96) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms