Coexpression cluster: Cluster_237 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0140096 catalytic activity, acting on a protein 25.0% (12/48) 1.88 6.5e-05 0.015043
GO:0005524 ATP binding 18.75% (9/48) 1.56 0.002865 0.031379
GO:0033015 tetrapyrrole catabolic process 2.08% (1/48) 8.47 0.002811 0.032326
GO:0006787 porphyrin-containing compound catabolic process 2.08% (1/48) 8.47 0.002811 0.032326
GO:0046149 pigment catabolic process 2.08% (1/48) 8.47 0.002811 0.032326
GO:0015996 chlorophyll catabolic process 2.08% (1/48) 8.47 0.002811 0.032326
GO:0032555 purine ribonucleotide binding 20.83% (10/48) 1.4 0.003758 0.033241
GO:0046983 protein dimerization activity 8.33% (4/48) 2.72 0.0032 0.033456
GO:0097367 carbohydrate derivative binding 20.83% (10/48) 1.37 0.00442 0.033884
GO:0019199 transmembrane receptor protein kinase activity 4.17% (2/48) 4.37 0.004279 0.033938
GO:0004714 transmembrane receptor protein tyrosine kinase activity 4.17% (2/48) 4.47 0.003694 0.033982
GO:0036211 protein modification process 16.67% (8/48) 1.59 0.004603 0.034151
GO:0003774 cytoskeletal motor activity 4.17% (2/48) 4.39 0.004159 0.034161
GO:0008150 biological_process 52.08% (25/48) 0.69 0.00365 0.03498
GO:0004713 protein tyrosine kinase activity 4.17% (2/48) 4.24 0.005035 0.035089
GO:0032553 ribonucleotide binding 20.83% (10/48) 1.38 0.004121 0.035103
GO:0004888 transmembrane signaling receptor activity 4.17% (2/48) 4.26 0.004905 0.035252
GO:1901700 response to oxygen-containing compound 4.17% (2/48) 5.62 0.000768 0.035307
GO:0017076 purine nucleotide binding 20.83% (10/48) 1.33 0.005289 0.035777
GO:0016773 phosphotransferase activity, alcohol group as acceptor 14.58% (7/48) 1.8 0.003614 0.036141
GO:0004672 protein kinase activity 14.58% (7/48) 1.94 0.002141 0.03788
GO:0016301 kinase activity 16.67% (8/48) 1.94 0.00099 0.037944
GO:0007017 microtubule-based process 6.25% (3/48) 4.14 0.000669 0.038478
GO:0003777 microtubule motor activity 4.17% (2/48) 4.69 0.002743 0.039427
GO:0016772 transferase activity, transferring phosphorus-containing groups 16.67% (8/48) 1.77 0.002075 0.039769
GO:0043622 cortical microtubule organization 2.08% (1/48) 6.89 0.00841 0.041153
GO:0030865 cortical cytoskeleton organization 2.08% (1/48) 6.89 0.00841 0.041153
GO:0008017 microtubule binding 4.17% (2/48) 3.83 0.008782 0.041224
GO:0046982 protein heterodimerization activity 4.17% (2/48) 3.84 0.008615 0.041278
GO:0097305 response to alcohol 2.08% (1/48) 6.47 0.011197 0.041538
GO:0015645 fatty acid ligase activity 2.08% (1/48) 6.47 0.011197 0.041538
GO:0009737 response to abscisic acid 2.08% (1/48) 6.47 0.011197 0.041538
GO:0004467 long-chain fatty acid-CoA ligase activity 2.08% (1/48) 6.47 0.011197 0.041538
GO:1901564 organonitrogen compound metabolic process 25.0% (12/48) 1.29 0.002709 0.041544
GO:0019538 protein metabolic process 22.92% (11/48) 1.46 0.001629 0.041627
GO:0007018 microtubule-based movement 4.17% (2/48) 4.75 0.00255 0.041888
GO:0016310 phosphorylation 14.58% (7/48) 1.95 0.002005 0.041925
GO:0043170 macromolecule metabolic process 25.0% (12/48) 1.1 0.007874 0.042116
GO:0044237 cellular metabolic process 25.0% (12/48) 1.03 0.011545 0.042148
GO:0043168 anion binding 20.83% (10/48) 1.24 0.008293 0.042389
GO:0015631 tubulin binding 4.17% (2/48) 3.68 0.010726 0.042535
GO:0046700 heterocycle catabolic process 4.17% (2/48) 3.71 0.01036 0.042549
GO:0044270 cellular nitrogen compound catabolic process 4.17% (2/48) 3.72 0.010179 0.042566
GO:0070001 aspartic-type peptidase activity 4.17% (2/48) 3.75 0.009821 0.042619
GO:0004190 aspartic-type endopeptidase activity 4.17% (2/48) 3.75 0.009821 0.042619
GO:0006468 protein phosphorylation 14.58% (7/48) 1.97 0.001859 0.042764
GO:1901265 nucleoside phosphate binding 20.83% (10/48) 1.25 0.007836 0.04291
GO:0000166 nucleotide binding 20.83% (10/48) 1.25 0.007836 0.04291
GO:1901363 heterocyclic compound binding 20.83% (10/48) 1.19 0.010117 0.043091
GO:0036094 small molecule binding 20.83% (10/48) 1.18 0.010698 0.043166
GO:0060089 molecular transducer activity 4.17% (2/48) 3.87 0.008283 0.043297
GO:0035639 purine ribonucleoside triphosphate binding 20.83% (10/48) 1.58 0.001513 0.043497
GO:0006308 DNA catabolic process 2.08% (1/48) 7.15 0.007013 0.043593
GO:0030554 adenyl nucleotide binding 18.75% (9/48) 1.3 0.009602 0.044168
GO:0031122 cytoplasmic microtubule organization 2.08% (1/48) 6.67 0.009804 0.044216
GO:0006793 phosphorus metabolic process 18.75% (9/48) 1.9 0.000577 0.044226
GO:0006807 nitrogen compound metabolic process 27.08% (13/48) 1.04 0.007707 0.044314
GO:0032559 adenyl ribonucleotide binding 18.75% (9/48) 1.37 0.006969 0.044524
GO:0009987 cellular process 35.42% (17/48) 0.87 0.00681 0.044749
GO:0043412 macromolecule modification 16.67% (8/48) 1.46 0.007606 0.044853
GO:0038023 signaling receptor activity 4.17% (2/48) 3.95 0.00748 0.045274
GO:0080124 pheophytinase activity 2.08% (1/48) 9.47 0.001406 0.046211
GO:0016878 acid-thiol ligase activity 2.08% (1/48) 6.15 0.013977 0.047277
GO:0001101 response to acid chemical 2.08% (1/48) 6.15 0.013977 0.047277
GO:0009415 response to water 2.08% (1/48) 6.15 0.013977 0.047277
GO:0016405 CoA-ligase activity 2.08% (1/48) 6.15 0.013977 0.047277
GO:0071704 organic substance metabolic process 31.25% (15/48) 0.84 0.013736 0.049363
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (48) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms