Coexpression cluster: Cluster_215 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005488 binding 55.06% (49/89) 0.81 3e-06 0.001082
GO:0030976 thiamine pyrophosphate binding 2.25% (2/89) 6.41 0.000239 0.015883
GO:0050997 quaternary ammonium group binding 2.25% (2/89) 6.41 0.000239 0.015883
GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity 2.25% (2/89) 7.0 0.0001 0.01663
GO:0005515 protein binding 25.84% (23/89) 1.15 0.000168 0.018591
GO:0003674 molecular_function 66.29% (59/89) 0.44 0.000739 0.02452
GO:1903293 phosphatase complex 2.25% (2/89) 5.68 0.000691 0.025476
GO:0008287 protein serine/threonine phosphatase complex 2.25% (2/89) 5.68 0.000691 0.025476
GO:0016307 obsolete phosphatidylinositol phosphate kinase activity 2.25% (2/89) 5.5 0.000891 0.026906
GO:0052742 phosphatidylinositol kinase activity 2.25% (2/89) 5.78 0.0006 0.028436
GO:0000159 protein phosphatase type 2A complex 2.25% (2/89) 5.78 0.0006 0.028436
GO:0001727 lipid kinase activity 2.25% (2/89) 5.12 0.001501 0.035605
GO:1901681 sulfur compound binding 2.25% (2/89) 5.12 0.001501 0.035605
GO:0000291 nuclear-transcribed mRNA catabolic process, exonucleolytic 1.12% (1/89) 8.58 0.002608 0.036074
GO:0034427 nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' 1.12% (1/89) 8.58 0.002608 0.036074
GO:0003984 acetolactate synthase activity 1.12% (1/89) 8.58 0.002608 0.036074
GO:0000956 nuclear-transcribed mRNA catabolic process 2.25% (2/89) 5.19 0.001367 0.037827
GO:0016755 aminoacyltransferase activity 4.49% (4/89) 2.83 0.002462 0.038918
GO:0009889 regulation of biosynthetic process 11.24% (10/89) 1.46 0.003375 0.040013
GO:0031326 regulation of cellular biosynthetic process 11.24% (10/89) 1.46 0.003375 0.040013
GO:0006402 mRNA catabolic process 2.25% (2/89) 4.78 0.002432 0.040372
GO:0004540 RNA nuclease activity 3.37% (3/89) 3.51 0.002376 0.041509
GO:0019208 phosphatase regulator activity 2.25% (2/89) 4.83 0.002262 0.041724
GO:0010556 regulation of macromolecule biosynthetic process 11.24% (10/89) 1.46 0.00334 0.042654
GO:0019787 ubiquitin-like protein transferase activity 4.49% (4/89) 2.88 0.002184 0.042658
GO:0004842 ubiquitin-protein transferase activity 4.49% (4/89) 2.92 0.001964 0.043477
GO:0019888 protein phosphatase regulator activity 2.25% (2/89) 4.88 0.002098 0.043536
GO:0010468 regulation of gene expression 11.24% (10/89) 1.47 0.003306 0.04391
GO:0010558 negative regulation of macromolecule biosynthetic process 3.37% (3/89) 3.16 0.004728 0.044848
GO:0031327 negative regulation of cellular biosynthetic process 3.37% (3/89) 3.16 0.004728 0.044848
GO:0009890 negative regulation of biosynthetic process 3.37% (3/89) 3.16 0.004728 0.044848
GO:0019222 regulation of metabolic process 11.24% (10/89) 1.39 0.004897 0.045162
GO:0004591 oxoglutarate dehydrogenase (succinyl-transferring) activity 1.12% (1/89) 7.58 0.005209 0.045508
GO:0005639 obsolete integral component of nuclear inner membrane 1.12% (1/89) 7.58 0.005209 0.045508
GO:0050794 regulation of cellular process 13.48% (12/89) 1.24 0.004595 0.047672
GO:0060255 regulation of macromolecule metabolic process 11.24% (10/89) 1.4 0.004582 0.049072
GO:0031323 regulation of cellular metabolic process 11.24% (10/89) 1.4 0.004517 0.049985
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (89) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms