Coexpression cluster: Cluster_85 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0008150 biological_process 53.0% (115/217) 0.71 0.0 0.0
GO:0050789 regulation of biological process 16.59% (36/217) 1.46 0.0 1.1e-05
GO:0050794 regulation of cellular process 15.67% (34/217) 1.46 0.0 1.3e-05
GO:0065007 biological regulation 16.59% (36/217) 1.42 0.0 1.4e-05
GO:0003700 DNA-binding transcription factor activity 9.22% (20/217) 1.86 1e-06 0.000103
GO:0140110 transcription regulator activity 9.22% (20/217) 1.77 2e-06 0.000212
GO:0019219 regulation of nucleobase-containing compound metabolic process 10.6% (23/217) 1.48 1e-05 0.000319
GO:0004672 protein kinase activity 10.6% (23/217) 1.48 1e-05 0.000332
GO:0031326 regulation of cellular biosynthetic process 11.06% (24/217) 1.44 1e-05 0.000345
GO:0009889 regulation of biosynthetic process 11.06% (24/217) 1.44 1e-05 0.000345
GO:0010556 regulation of macromolecule biosynthetic process 11.06% (24/217) 1.44 1e-05 0.000379
GO:0080090 regulation of primary metabolic process 11.06% (24/217) 1.45 9e-06 0.000389
GO:0010468 regulation of gene expression 11.06% (24/217) 1.44 1e-05 0.000395
GO:0051252 regulation of RNA metabolic process 10.6% (23/217) 1.49 9e-06 0.000413
GO:0051171 regulation of nitrogen compound metabolic process 11.06% (24/217) 1.45 8e-06 0.000433
GO:0019222 regulation of metabolic process 11.52% (25/217) 1.42 8e-06 0.000449
GO:2001141 regulation of RNA biosynthetic process 10.6% (23/217) 1.5 8e-06 0.000491
GO:0006355 regulation of DNA-templated transcription 10.6% (23/217) 1.5 8e-06 0.000491
GO:0060255 regulation of macromolecule metabolic process 11.52% (25/217) 1.44 7e-06 0.000525
GO:0031323 regulation of cellular metabolic process 11.52% (25/217) 1.44 7e-06 0.000579
GO:0006468 protein phosphorylation 10.14% (22/217) 1.45 2.2e-05 0.000635
GO:0016310 phosphorylation 10.14% (22/217) 1.43 2.6e-05 0.000741
GO:0030554 adenyl nucleotide binding 15.67% (34/217) 1.04 5e-05 0.000963
GO:0016773 phosphotransferase activity, alcohol group as acceptor 10.6% (23/217) 1.34 4.4e-05 0.000974
GO:0005524 ATP binding 13.82% (30/217) 1.13 4.9e-05 0.000975
GO:0043168 anion binding 17.51% (38/217) 0.99 3.7e-05 0.000983
GO:0009786 regulation of asymmetric cell division 0.92% (2/217) 7.3 4e-05 0.000992
GO:0051302 regulation of cell division 0.92% (2/217) 7.3 4e-05 0.000992
GO:0032555 purine ribonucleotide binding 16.13% (35/217) 1.03 4.2e-05 0.000993
GO:0032559 adenyl ribonucleotide binding 15.21% (33/217) 1.07 4.4e-05 0.000997
GO:0035639 purine ribonucleoside triphosphate binding 14.75% (32/217) 1.08 4.9e-05 0.001006
GO:0032553 ribonucleotide binding 16.13% (35/217) 1.01 5.4e-05 0.001016
GO:0017076 purine nucleotide binding 16.59% (36/217) 1.0 4.9e-05 0.001031
GO:0003674 molecular_function 62.21% (135/217) 0.34 6e-05 0.001084
GO:0097367 carbohydrate derivative binding 16.13% (35/217) 1.0 6.6e-05 0.001167
GO:1901363 heterocyclic compound binding 17.51% (38/217) 0.94 6.9e-05 0.001177
GO:0016301 kinase activity 10.6% (23/217) 1.29 7.8e-05 0.00129
GO:0036094 small molecule binding 17.51% (38/217) 0.93 8.2e-05 0.001328
GO:0006796 phosphate-containing compound metabolic process 11.52% (25/217) 1.2 0.000101 0.001596
GO:0006793 phosphorus metabolic process 11.52% (25/217) 1.19 0.000106 0.001629
GO:0071704 organic substance metabolic process 27.65% (60/217) 0.67 0.000115 0.001722
GO:0000166 nucleotide binding 16.59% (36/217) 0.92 0.000152 0.00218
GO:1901265 nucleoside phosphate binding 16.59% (36/217) 0.92 0.000152 0.00218
GO:0140096 catalytic activity, acting on a protein 13.82% (30/217) 1.03 0.000168 0.002347
GO:0009987 cellular process 29.49% (64/217) 0.6 0.000225 0.003074
GO:0044238 primary metabolic process 25.35% (55/217) 0.66 0.000295 0.003951
GO:0008152 metabolic process 28.11% (61/217) 0.6 0.000381 0.005
GO:0004351 glutamate decarboxylase activity 0.92% (2/217) 5.98 0.000397 0.0051
GO:0016772 transferase activity, transferring phosphorus-containing groups 10.6% (23/217) 1.12 0.000415 0.005213
GO:0016831 carboxy-lyase activity 1.84% (4/217) 3.46 0.000482 0.005942
GO:0060589 nucleoside-triphosphatase regulator activity 1.84% (4/217) 3.25 0.000842 0.009782
GO:0030695 GTPase regulator activity 1.84% (4/217) 3.25 0.000842 0.009782
GO:0009881 photoreceptor activity 0.92% (2/217) 5.49 0.000828 0.009995
GO:0009064 glutamine family amino acid metabolic process 1.38% (3/217) 3.98 0.000907 0.010344
GO:0006536 glutamate metabolic process 0.92% (2/217) 5.3 0.001099 0.011669
GO:0007143 female meiotic nuclear division 0.92% (2/217) 5.3 0.001099 0.011669
GO:0036211 protein modification process 11.06% (24/217) 0.99 0.001054 0.011806
GO:0097159 organic cyclic compound binding 26.73% (58/217) 0.56 0.001139 0.011894
GO:0005488 binding 41.47% (90/217) 0.4 0.001097 0.012072
GO:0009416 response to light stimulus 1.38% (3/217) 3.79 0.001312 0.013466
GO:0009314 response to radiation 1.38% (3/217) 3.75 0.001428 0.01442
GO:0043412 macromolecule modification 11.52% (25/217) 0.93 0.001526 0.015159
GO:0016830 carbon-carbon lyase activity 1.84% (4/217) 2.96 0.001804 0.01764
GO:1901564 organonitrogen compound metabolic process 16.59% (36/217) 0.7 0.002576 0.02479
GO:0043167 ion binding 21.66% (47/217) 0.57 0.003075 0.029144
GO:0044237 cellular metabolic process 18.89% (41/217) 0.62 0.003235 0.03019
GO:0000280 nuclear division 0.92% (2/217) 4.49 0.003482 0.030643
GO:0022412 cellular process involved in reproduction in multicellular organism 0.92% (2/217) 4.49 0.003482 0.030643
GO:0140013 meiotic nuclear division 0.92% (2/217) 4.49 0.003482 0.030643
GO:0007140 male meiotic nuclear division 0.92% (2/217) 4.49 0.003482 0.030643
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (217) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms