Coexpression cluster: Cluster_187 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific 9.38% (6/64) 5.36 0.0 2e-06
GO:0008289 lipid binding 10.94% (7/64) 4.47 0.0 5e-06
GO:0097159 organic cyclic compound binding 39.06% (25/64) 1.1 7.1e-05 0.00748
GO:0003674 molecular_function 71.88% (46/64) 0.55 0.00017 0.010677
GO:0003676 nucleic acid binding 23.44% (15/64) 1.52 0.000159 0.012485
GO:0140657 ATP-dependent activity 9.38% (6/64) 2.73 0.000292 0.013085
GO:0005488 binding 53.12% (34/64) 0.76 0.000253 0.013224
GO:0008094 ATP-dependent activity, acting on DNA 4.69% (3/64) 4.2 0.000596 0.020785
GO:0003678 DNA helicase activity 3.12% (2/64) 5.81 0.00058 0.022761
GO:0043139 5'-3' DNA helicase activity 1.56% (1/64) 9.06 0.001875 0.032712
GO:0004573 Glc3Man9GlcNAc2 oligosaccharide glucosidase activity 1.56% (1/64) 9.06 0.001875 0.032712
GO:0003942 N-acetyl-gamma-glutamyl-phosphate reductase activity 1.56% (1/64) 9.06 0.001875 0.032712
GO:0004712 protein serine/threonine/tyrosine kinase activity 1.56% (1/64) 9.06 0.001875 0.032712
GO:0051304 chromosome separation 1.56% (1/64) 9.06 0.001875 0.032712
GO:0051014 actin filament severing 1.56% (1/64) 9.06 0.001875 0.032712
GO:0017076 purine nucleotide binding 20.31% (13/64) 1.29 0.002006 0.033159
GO:0035639 purine ribonucleoside triphosphate binding 18.75% (12/64) 1.43 0.001414 0.040364
GO:0140097 catalytic activity, acting on DNA 4.69% (3/64) 3.45 0.00264 0.041447
GO:0003677 DNA binding 14.06% (9/64) 1.75 0.001334 0.041882
GO:0036094 small molecule binding 20.31% (13/64) 1.15 0.004889 0.043864
GO:0032553 ribonucleotide binding 18.75% (12/64) 1.23 0.004392 0.04449
GO:1901363 heterocyclic compound binding 20.31% (13/64) 1.16 0.004557 0.044714
GO:0050789 regulation of biological process 15.62% (10/64) 1.37 0.004858 0.04487
GO:1901265 nucleoside phosphate binding 20.31% (13/64) 1.21 0.0033 0.045052
GO:0000166 nucleotide binding 20.31% (13/64) 1.21 0.0033 0.045052
GO:0097367 carbohydrate derivative binding 18.75% (12/64) 1.21 0.004752 0.045214
GO:0031326 regulation of cellular biosynthetic process 12.5% (8/64) 1.62 0.004376 0.045807
GO:0009889 regulation of biosynthetic process 12.5% (8/64) 1.62 0.004376 0.045807
GO:0003700 DNA-binding transcription factor activity 9.38% (6/64) 1.88 0.005703 0.045914
GO:0019222 regulation of metabolic process 12.5% (8/64) 1.54 0.005996 0.04592
GO:0065007 biological regulation 15.62% (10/64) 1.33 0.005851 0.045928
GO:0006259 DNA metabolic process 6.25% (4/64) 2.96 0.001769 0.046299
GO:0060255 regulation of macromolecule metabolic process 12.5% (8/64) 1.55 0.005668 0.046833
GO:0015399 primary active transmembrane transporter activity 4.69% (3/64) 3.01 0.006266 0.046845
GO:0015926 glucosidase activity 1.56% (1/64) 8.06 0.003747 0.047063
GO:0004654 polyribonucleotide nucleotidyltransferase activity 1.56% (1/64) 8.06 0.003747 0.047063
GO:0043138 3'-5' DNA helicase activity 1.56% (1/64) 7.47 0.005615 0.047655
GO:0032555 purine ribonucleotide binding 18.75% (12/64) 1.25 0.003959 0.047817
GO:0050794 regulation of cellular process 15.62% (10/64) 1.45 0.003204 0.047905
GO:0010556 regulation of macromolecule biosynthetic process 12.5% (8/64) 1.62 0.004339 0.048659
GO:0031323 regulation of cellular metabolic process 12.5% (8/64) 1.56 0.005599 0.048837
GO:0005524 ATP binding 15.62% (10/64) 1.3 0.006716 0.049041
GO:0051276 chromosome organization 3.12% (2/64) 4.01 0.006873 0.049051
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (64) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms