Coexpression cluster: Cluster_84 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003774 cytoskeletal motor activity 10.71% (9/84) 5.75 0.0 0.0
GO:0003777 microtubule motor activity 9.52% (8/84) 5.89 0.0 0.0
GO:0007018 microtubule-based movement 9.52% (8/84) 5.94 0.0 0.0
GO:0008017 microtubule binding 10.71% (9/84) 5.19 0.0 0.0
GO:0015631 tubulin binding 10.71% (9/84) 5.04 0.0 0.0
GO:0007017 microtubule-based process 10.71% (9/84) 4.92 0.0 0.0
GO:0008092 cytoskeletal protein binding 11.9% (10/84) 4.4 0.0 0.0
GO:0005575 cellular_component 33.33% (28/84) 1.72 0.0 0.0
GO:0005524 ATP binding 26.19% (22/84) 2.05 0.0 0.0
GO:0035639 purine ribonucleoside triphosphate binding 26.19% (22/84) 1.91 0.0 2e-06
GO:0032559 adenyl ribonucleotide binding 26.19% (22/84) 1.85 0.0 3e-06
GO:0005515 protein binding 33.33% (28/84) 1.52 0.0 5e-06
GO:0030554 adenyl nucleotide binding 26.19% (22/84) 1.78 0.0 7e-06
GO:0140657 ATP-dependent activity 11.9% (10/84) 3.07 0.0 8e-06
GO:0009360 DNA polymerase III complex 3.57% (3/84) 7.67 0.0 8e-06
GO:0005488 binding 58.33% (49/84) 0.89 0.0 9e-06
GO:0032555 purine ribonucleotide binding 26.19% (22/84) 1.73 0.0 9e-06
GO:0032553 ribonucleotide binding 26.19% (22/84) 1.71 0.0 1e-05
GO:0032991 protein-containing complex 16.67% (14/84) 2.37 0.0 1e-05
GO:0097367 carbohydrate derivative binding 26.19% (22/84) 1.7 1e-06 1.2e-05
GO:1990234 transferase complex 7.14% (6/84) 4.24 1e-06 1.6e-05
GO:0017076 purine nucleotide binding 26.19% (22/84) 1.66 1e-06 1.6e-05
GO:0042575 DNA polymerase complex 3.57% (3/84) 6.93 2e-06 3e-05
GO:1901265 nucleoside phosphate binding 26.19% (22/84) 1.58 2e-06 3.7e-05
GO:0000166 nucleotide binding 26.19% (22/84) 1.58 2e-06 3.7e-05
GO:0043168 anion binding 26.19% (22/84) 1.57 3e-06 4e-05
GO:1901363 heterocyclic compound binding 26.19% (22/84) 1.52 4e-06 6.3e-05
GO:0097159 organic cyclic compound binding 39.29% (33/84) 1.11 5e-06 6.7e-05
GO:0036094 small molecule binding 26.19% (22/84) 1.51 5e-06 6.7e-05
GO:0009987 cellular process 40.48% (34/84) 1.06 7e-06 9.2e-05
GO:0003674 molecular_function 72.62% (61/84) 0.57 9e-06 0.000118
GO:0003887 DNA-directed DNA polymerase activity 3.57% (3/84) 6.0 1.4e-05 0.000171
GO:0034061 DNA polymerase activity 3.57% (3/84) 5.93 1.6e-05 0.000194
GO:0008150 biological_process 54.76% (46/84) 0.76 1.9e-05 0.000223
GO:0035251 UDP-glucosyltransferase activity 4.76% (4/84) 4.58 2.5e-05 0.000284
GO:0006996 organelle organization 7.14% (6/84) 3.37 2.7e-05 0.000298
GO:0043167 ion binding 32.14% (27/84) 1.14 3.6e-05 0.000394
GO:0140535 intracellular protein-containing complex 5.95% (5/84) 3.64 5.3e-05 0.000564
GO:0008278 cohesin complex 2.38% (2/84) 7.08 8.9e-05 0.000899
GO:0061695 transferase complex, transferring phosphorus-containing groups 3.57% (3/84) 5.12 8.9e-05 0.000919
GO:1902494 catalytic complex 7.14% (6/84) 2.97 0.000122 0.001201
GO:0046527 glucosyltransferase activity 4.76% (4/84) 3.95 0.000135 0.001296
GO:0090224 regulation of spindle organization 2.38% (2/84) 6.67 0.000166 0.00152
GO:0060236 regulation of mitotic spindle organization 2.38% (2/84) 6.67 0.000166 0.00152
GO:0009725 response to hormone 4.76% (4/84) 3.76 0.000226 0.002021
GO:0009719 response to endogenous stimulus 4.76% (4/84) 3.75 0.000233 0.002041
GO:0051274 beta-glucan biosynthetic process 3.57% (3/84) 4.61 0.000259 0.002223
GO:0051273 beta-glucan metabolic process 3.57% (3/84) 4.58 0.000275 0.002309
GO:0070507 regulation of microtubule cytoskeleton organization 2.38% (2/84) 6.21 0.000325 0.002669
GO:0000148 1,3-beta-D-glucan synthase complex 2.38% (2/84) 6.08 0.000389 0.002901
GO:0003843 1,3-beta-D-glucan synthase activity 2.38% (2/84) 6.08 0.000389 0.002901
GO:0006074 (1->3)-beta-D-glucan metabolic process 2.38% (2/84) 6.08 0.000389 0.002901
GO:0006075 (1->3)-beta-D-glucan biosynthetic process 2.38% (2/84) 6.08 0.000389 0.002901
GO:0010033 response to organic substance 4.76% (4/84) 3.56 0.000384 0.003097
GO:0140097 catalytic activity, acting on DNA 4.76% (4/84) 3.48 0.000475 0.003194
GO:0043229 intracellular organelle 10.71% (9/84) 1.98 0.000469 0.003202
GO:0043226 organelle 10.71% (9/84) 1.98 0.000469 0.003202
GO:0005634 nucleus 7.14% (6/84) 2.63 0.00044 0.003223
GO:0110165 cellular anatomical entity 19.05% (16/84) 1.34 0.000488 0.003224
GO:0032886 regulation of microtubule-based process 2.38% (2/84) 5.97 0.000459 0.003301
GO:0009250 glucan biosynthetic process 3.57% (3/84) 4.32 0.000467 0.003301
GO:0051276 chromosome organization 3.57% (3/84) 4.21 0.000588 0.003825
GO:0042221 response to chemical 4.76% (4/84) 3.38 0.00061 0.003902
GO:0000271 polysaccharide biosynthetic process 3.57% (3/84) 4.16 0.000642 0.004044
GO:0007062 sister chromatid cohesion 2.38% (2/84) 5.42 0.000996 0.006176
GO:0006260 DNA replication 3.57% (3/84) 3.93 0.001031 0.006294
GO:0051493 regulation of cytoskeleton organization 2.38% (2/84) 5.27 0.001219 0.007334
GO:0098797 plasma membrane protein complex 2.38% (2/84) 5.21 0.001339 0.007937
GO:0044042 glucan metabolic process 3.57% (3/84) 3.65 0.001795 0.010483
GO:0043231 intracellular membrane-bounded organelle 7.14% (6/84) 2.22 0.001901 0.010793
GO:0043227 membrane-bounded organelle 7.14% (6/84) 2.22 0.001901 0.010793
GO:0016051 carbohydrate biosynthetic process 3.57% (3/84) 3.51 0.002374 0.013288
GO:0035101 FACT complex 1.19% (1/84) 8.67 0.002461 0.013404
GO:0009904 chloroplast accumulation movement 1.19% (1/84) 8.67 0.002461 0.013404
GO:0010564 regulation of cell cycle process 2.38% (2/84) 4.67 0.00283 0.015206
GO:0016758 hexosyltransferase activity 4.76% (4/84) 2.75 0.003008 0.015952
GO:0005516 calmodulin binding 2.38% (2/84) 4.54 0.003379 0.017683
GO:0033043 regulation of organelle organization 2.38% (2/84) 4.5 0.003572 0.018453
GO:0005976 polysaccharide metabolic process 3.57% (3/84) 3.29 0.003682 0.018783
GO:0016043 cellular component organization 7.14% (6/84) 2.02 0.003767 0.018976
GO:0016779 nucleotidyltransferase activity 3.57% (3/84) 3.2 0.00438 0.021789
GO:0009902 chloroplast relocation 1.19% (1/84) 7.67 0.004917 0.022774
GO:0060548 obsolete negative regulation of cell death 1.19% (1/84) 7.67 0.004917 0.022774
GO:0051667 establishment of plastid localization 1.19% (1/84) 7.67 0.004917 0.022774
GO:0019750 chloroplast localization 1.19% (1/84) 7.67 0.004917 0.022774
GO:0051644 plastid localization 1.19% (1/84) 7.67 0.004917 0.022774
GO:0006259 DNA metabolic process 4.76% (4/84) 2.57 0.004743 0.023311
GO:0071840 cellular component organization or biogenesis 7.14% (6/84) 1.84 0.006741 0.03087
GO:0003989 acetyl-CoA carboxylase activity 1.19% (1/84) 7.08 0.007366 0.031579
GO:0016885 ligase activity, forming carbon-carbon bonds 1.19% (1/84) 7.08 0.007366 0.031579
GO:0016421 CoA carboxylase activity 1.19% (1/84) 7.08 0.007366 0.031579
GO:1902115 regulation of organelle assembly 1.19% (1/84) 7.08 0.007366 0.031579
GO:1901673 regulation of mitotic spindle assembly 1.19% (1/84) 7.08 0.007366 0.031579
GO:0090169 regulation of spindle assembly 1.19% (1/84) 7.08 0.007366 0.031579
GO:0003676 nucleic acid binding 16.67% (14/84) 1.03 0.00793 0.033641
GO:0008194 UDP-glycosyltransferase activity 4.76% (4/84) 2.34 0.008307 0.034874
GO:0006913 nucleocytoplasmic transport 2.38% (2/84) 3.83 0.008751 0.035986
GO:0051234 establishment of localization 10.71% (9/84) 1.35 0.008685 0.036084
GO:0034593 phosphatidylinositol bisphosphate phosphatase activity 1.19% (1/84) 6.67 0.009809 0.036603
GO:0034595 phosphatidylinositol phosphate 5-phosphatase activity 1.19% (1/84) 6.67 0.009809 0.036603
GO:0106018 phosphatidylinositol-3,5-bisphosphate phosphatase activity 1.19% (1/84) 6.67 0.009809 0.036603
GO:0051656 establishment of organelle localization 1.19% (1/84) 6.67 0.009809 0.036603
GO:0043813 phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity 1.19% (1/84) 6.67 0.009809 0.036603
GO:0052866 phosphatidylinositol phosphate phosphatase activity 1.19% (1/84) 6.67 0.009809 0.036603
GO:0051726 regulation of cell cycle 2.38% (2/84) 3.81 0.009049 0.036836
GO:0051169 nuclear transport 2.38% (2/84) 3.78 0.009352 0.037314
GO:0051179 localization 10.71% (9/84) 1.33 0.009301 0.037482
GO:0051128 regulation of cellular component organization 2.38% (2/84) 3.76 0.009659 0.038162
GO:0140640 catalytic activity, acting on a nucleic acid 5.95% (5/84) 1.89 0.011455 0.042353
GO:0032147 activation of protein kinase activity 1.19% (1/84) 6.34 0.012247 0.043293
GO:0030015 CCR4-NOT core complex 1.19% (1/84) 6.34 0.012247 0.043293
GO:0051640 organelle localization 1.19% (1/84) 6.34 0.012247 0.043293
GO:0004534 5'-3' RNA exonuclease activity 1.19% (1/84) 6.34 0.012247 0.043293
GO:0005819 spindle 1.19% (1/84) 6.34 0.012247 0.043293
GO:0015081 sodium ion transmembrane transporter activity 1.19% (1/84) 6.08 0.014678 0.049294
GO:0008023 transcription elongation factor complex 1.19% (1/84) 6.08 0.014678 0.049294
GO:0006611 protein export from nucleus 1.19% (1/84) 6.08 0.014678 0.049294
GO:0006885 regulation of pH 1.19% (1/84) 6.08 0.014678 0.049294
GO:0015385 sodium:proton antiporter activity 1.19% (1/84) 6.08 0.014678 0.049294
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (84) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms