Coexpression cluster: Cluster_2325 (Co-expression clusters of Hoang et al 2017 (PRJNA356226))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005575 cellular_component 41.28% (45/109) 1.05 0.0 0.000204
GO:0044248 cellular catabolic process 8.26% (9/109) 3.01 2e-06 0.000665
GO:0032787 monocarboxylic acid metabolic process 6.42% (7/109) 3.43 5e-06 0.000994
GO:0110165 cellular anatomical entity 33.94% (37/109) 0.94 3.3e-05 0.003592
GO:0009132 nucleoside diphosphate metabolic process 3.67% (4/109) 4.55 2.9e-05 0.003749
GO:0003997 acyl-CoA oxidase activity 1.83% (2/109) 7.67 4.6e-05 0.003755
GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase 1.83% (2/109) 7.7 4.5e-05 0.004133
GO:0009185 ribonucleoside diphosphate metabolic process 3.67% (4/109) 4.56 2.8e-05 0.00459
GO:0004332 fructose-bisphosphate aldolase activity 1.83% (2/109) 6.97 0.000124 0.00667
GO:0003674 molecular_function 52.29% (57/109) 0.56 0.000216 0.006679
GO:0006082 organic acid metabolic process 7.34% (8/109) 2.33 0.000213 0.006893
GO:0008150 biological_process 44.95% (49/109) 0.69 9.8e-05 0.00706
GO:0061919 process utilizing autophagic mechanism 2.75% (3/109) 5.02 0.00012 0.007069
GO:0006914 autophagy 2.75% (3/109) 5.02 0.00012 0.007069
GO:0019362 pyridine nucleotide metabolic process 3.67% (4/109) 3.93 0.000153 0.007088
GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor 1.83% (2/109) 6.49 0.000241 0.007102
GO:0005504 fatty acid binding 1.83% (2/109) 6.45 0.000253 0.007127
GO:0043436 oxoacid metabolic process 7.34% (8/109) 2.33 0.000212 0.007217
GO:0009987 cellular process 33.03% (36/109) 0.84 0.000191 0.007294
GO:0072524 pyridine-containing compound metabolic process 3.67% (4/109) 3.86 0.000183 0.007419
GO:0019752 carboxylic acid metabolic process 7.34% (8/109) 2.33 0.000208 0.007473
GO:0046496 nicotinamide nucleotide metabolic process 3.67% (4/109) 3.93 0.000151 0.007514
GO:0009056 catabolic process 8.26% (9/109) 2.19 0.000176 0.00762
GO:0016829 lyase activity 4.59% (5/109) 3.12 0.000299 0.007749
GO:0044281 small molecule metabolic process 9.17% (10/109) 1.95 0.000287 0.007752
GO:0006631 fatty acid metabolic process 3.67% (4/109) 3.65 0.000314 0.007827
GO:0030388 fructose 1,6-bisphosphate metabolic process 1.83% (2/109) 6.24 0.000339 0.008141
GO:0009134 nucleoside diphosphate catabolic process 2.75% (3/109) 4.28 0.000533 0.008857
GO:0009191 ribonucleoside diphosphate catabolic process 2.75% (3/109) 4.28 0.000533 0.008857
GO:0019364 pyridine nucleotide catabolic process 2.75% (3/109) 4.27 0.000548 0.008872
GO:0072526 pyridine-containing compound catabolic process 2.75% (3/109) 4.25 0.000564 0.00892
GO:0009137 purine nucleoside diphosphate catabolic process 2.75% (3/109) 4.28 0.000531 0.009304
GO:0009181 purine ribonucleoside diphosphate catabolic process 2.75% (3/109) 4.28 0.000531 0.009304
GO:0009135 purine nucleoside diphosphate metabolic process 2.75% (3/109) 4.28 0.000531 0.009304
GO:0009179 purine ribonucleoside diphosphate metabolic process 2.75% (3/109) 4.28 0.000531 0.009304
GO:0006096 glycolytic process 2.75% (3/109) 4.28 0.000531 0.009304
GO:0046032 ADP catabolic process 2.75% (3/109) 4.28 0.000531 0.009304
GO:0046031 ADP metabolic process 2.75% (3/109) 4.28 0.000531 0.009304
GO:0009261 ribonucleotide catabolic process 2.75% (3/109) 4.19 0.000641 0.009435
GO:0033293 monocarboxylic acid binding 1.83% (2/109) 5.8 0.000621 0.009584
GO:0009154 purine ribonucleotide catabolic process 2.75% (3/109) 4.19 0.000639 0.009624
GO:0006195 purine nucleotide catabolic process 2.75% (3/109) 4.15 0.000686 0.009884
GO:0009166 nucleotide catabolic process 2.75% (3/109) 4.13 0.000717 0.010094
GO:0016832 aldehyde-lyase activity 1.83% (2/109) 6.04 0.000448 0.010377
GO:1901292 nucleoside phosphate catabolic process 2.75% (3/109) 4.1 0.000759 0.010463
GO:0008152 metabolic process 28.44% (31/109) 0.83 0.000777 0.010492
GO:0009117 nucleotide metabolic process 4.59% (5/109) 2.97 0.000476 0.010647
GO:0006753 nucleoside phosphate metabolic process 4.59% (5/109) 2.96 0.000499 0.010776
GO:0097526 spliceosomal tri-snRNP complex 1.83% (2/109) 5.52 0.000909 0.01202
GO:0055086 nucleobase-containing small molecule metabolic process 4.59% (5/109) 2.75 0.00096 0.012197
GO:0072523 purine-containing compound catabolic process 2.75% (3/109) 3.99 0.000952 0.012334
GO:0034655 nucleobase-containing compound catabolic process 3.67% (4/109) 3.19 0.001046 0.013039
GO:0046034 ATP metabolic process 2.75% (3/109) 3.92 0.001097 0.013163
GO:0008289 lipid binding 3.67% (4/109) 3.17 0.001096 0.013404
GO:0140513 nuclear protein-containing complex 6.42% (7/109) 2.11 0.001299 0.015026
GO:0009144 purine nucleoside triphosphate metabolic process 2.75% (3/109) 3.82 0.001328 0.015103
GO:0009205 purine ribonucleoside triphosphate metabolic process 2.75% (3/109) 3.84 0.001284 0.015125
GO:0009259 ribonucleotide metabolic process 3.67% (4/109) 3.08 0.001379 0.015145
GO:0031177 phosphopantetheine binding 0.92% (1/109) 9.43 0.00145 0.015157
GO:0044238 primary metabolic process 25.69% (28/109) 0.84 0.001364 0.015244
GO:0046700 heterocycle catabolic process 3.67% (4/109) 3.06 0.001435 0.015249
GO:0044270 cellular nitrogen compound catabolic process 3.67% (4/109) 3.06 0.001435 0.015249
GO:0016830 carbon-carbon lyase activity 2.75% (3/109) 3.73 0.001574 0.015694
GO:0019693 ribose phosphate metabolic process 3.67% (4/109) 3.02 0.0016 0.015707
GO:0043231 intracellular membrane-bounded organelle 15.6% (17/109) 1.15 0.001553 0.015724
GO:1901136 carbohydrate derivative catabolic process 2.75% (3/109) 3.75 0.001539 0.015825
GO:0043227 membrane-bounded organelle 15.6% (17/109) 1.14 0.001682 0.016032
GO:0044237 cellular metabolic process 22.02% (24/109) 0.91 0.001663 0.016081
GO:0042594 response to starvation 1.83% (2/109) 4.99 0.001879 0.017146
GO:0031406 carboxylic acid binding 1.83% (2/109) 4.94 0.002019 0.017215
GO:0043177 organic acid binding 1.83% (2/109) 4.94 0.002019 0.017215
GO:0055088 lipid homeostasis 1.83% (2/109) 4.99 0.001868 0.017292
GO:0061077 chaperone-mediated protein folding 1.83% (2/109) 4.97 0.001932 0.017389
GO:0006139 nucleobase-containing compound metabolic process 11.93% (13/109) 1.34 0.001859 0.017463
GO:0009199 ribonucleoside triphosphate metabolic process 2.75% (3/109) 3.62 0.001981 0.017583
GO:0006090 pyruvate metabolic process 2.75% (3/109) 3.61 0.002014 0.017637
GO:0019439 aromatic compound catabolic process 3.67% (4/109) 2.89 0.0022 0.017819
GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity 0.92% (1/109) 8.84 0.002174 0.017836
GO:0009141 nucleoside triphosphate metabolic process 2.75% (3/109) 3.57 0.002156 0.017908
GO:0006163 purine nucleotide metabolic process 3.67% (4/109) 2.9 0.002134 0.01796
GO:1901361 organic cyclic compound catabolic process 3.67% (4/109) 2.87 0.002341 0.018278
GO:0005488 binding 34.86% (38/109) 0.63 0.002329 0.018402
GO:0046434 organophosphate catabolic process 2.75% (3/109) 3.54 0.002312 0.018497
GO:0030621 U4 snRNA binding 0.92% (1/109) 8.62 0.002536 0.019336
GO:0000035 acyl binding 0.92% (1/109) 8.62 0.002536 0.019336
GO:0072521 purine-containing compound metabolic process 3.67% (4/109) 2.81 0.002667 0.020092
GO:0005737 cytoplasm 9.17% (10/109) 1.51 0.002825 0.021039
GO:0043226 organelle 16.51% (18/109) 1.02 0.003122 0.022231
GO:0006635 fatty acid beta-oxidation 1.83% (2/109) 4.64 0.003029 0.022306
GO:0043229 intracellular organelle 16.51% (18/109) 1.02 0.003119 0.022454
GO:0005515 protein binding 15.6% (17/109) 1.06 0.003087 0.022476
GO:0019395 fatty acid oxidation 1.83% (2/109) 4.59 0.003232 0.022767
GO:0046483 heterocycle metabolic process 11.93% (13/109) 1.24 0.003364 0.023192
GO:0071704 organic substance metabolic process 25.69% (28/109) 0.75 0.003353 0.023364
GO:0034719 SMN-Sm protein complex 0.92% (1/109) 8.18 0.003441 0.02347
GO:0009991 response to extracellular stimulus 1.83% (2/109) 4.48 0.00373 0.024921
GO:0031667 response to nutrient levels 1.83% (2/109) 4.49 0.003716 0.025081
GO:0009062 fatty acid catabolic process 1.83% (2/109) 4.41 0.004091 0.026779
GO:0006725 cellular aromatic compound metabolic process 11.93% (13/109) 1.21 0.00408 0.02698
GO:0006457 protein folding 2.75% (3/109) 3.21 0.004353 0.027927
GO:0034498 early endosome to Golgi transport 0.92% (1/109) 7.84 0.004344 0.028151
GO:0001096 TFIIF-class transcription factor complex binding 0.92% (1/109) 7.67 0.004886 0.02959
GO:0072341 modified amino acid binding 0.92% (1/109) 7.67 0.004886 0.02959
GO:0030532 small nuclear ribonucleoprotein complex 1.83% (2/109) 4.29 0.00481 0.029682
GO:0097525 spliceosomal snRNP complex 1.83% (2/109) 4.3 0.004793 0.029864
GO:0018812 3-hydroxyacyl-CoA dehydratase activity 0.92% (1/109) 7.73 0.004705 0.029893
GO:0005829 cytosol 5.5% (6/109) 1.96 0.004764 0.029973
GO:1901360 organic cyclic compound metabolic process 11.93% (13/109) 1.17 0.005184 0.030261
GO:0031416 NatB complex 0.92% (1/109) 7.62 0.005066 0.030399
GO:0071949 FAD binding 1.83% (2/109) 4.24 0.00518 0.030517
GO:0006807 nitrogen compound metabolic process 21.1% (23/109) 0.81 0.005171 0.030743
GO:0034641 cellular nitrogen compound metabolic process 11.93% (13/109) 1.16 0.005538 0.032039
GO:0016052 carbohydrate catabolic process 2.75% (3/109) 3.07 0.005688 0.032619
GO:0120114 Sm-like protein family complex 1.83% (2/109) 4.16 0.005761 0.032744
GO:0017070 U6 snRNA binding 0.92% (1/109) 7.38 0.005969 0.033631
GO:0005674 transcription factor TFIIF complex 0.92% (1/109) 7.34 0.006149 0.033766
GO:1990071 TRAPPII protein complex 0.92% (1/109) 7.34 0.006149 0.033766
GO:0072329 monocarboxylic acid catabolic process 1.83% (2/109) 4.12 0.006052 0.033808
GO:0034440 lipid oxidation 1.83% (2/109) 4.01 0.007045 0.038362
GO:0042761 very long-chain fatty acid biosynthetic process 0.92% (1/109) 7.04 0.00759 0.040987
GO:0036387 pre-replicative complex 0.92% (1/109) 6.94 0.00813 0.042832
GO:0005656 nuclear pre-replicative complex 0.92% (1/109) 6.94 0.00813 0.042832
GO:0004450 isocitrate dehydrogenase (NADP+) activity 0.92% (1/109) 6.94 0.00813 0.042832
GO:0009150 purine ribonucleotide metabolic process 2.75% (3/109) 2.87 0.008385 0.043465
GO:0019637 organophosphate metabolic process 4.59% (5/109) 2.01 0.008358 0.043675
GO:0006091 generation of precursor metabolites and energy 2.75% (3/109) 2.85 0.008678 0.044627
GO:0004300 enoyl-CoA hydratase activity 0.92% (1/109) 6.81 0.00885 0.045154
GO:0010228 vegetative to reproductive phase transition of meristem 0.92% (1/109) 6.76 0.009209 0.04626
GO:0080025 phosphatidylinositol-3,5-bisphosphate binding 0.92% (1/109) 6.76 0.009209 0.04626
GO:0034715 pICln-Sm protein complex 0.92% (1/109) 6.73 0.009389 0.0468
GO:0005777 peroxisome 1.83% (2/109) 3.75 0.009893 0.048935
GO:0003824 catalytic activity 27.52% (30/109) 0.6 0.00998 0.048992
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (109) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms