Coexpression cluster: Cluster_7128 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0033979 box H/ACA RNA metabolic process 100.0% (3/3) 16.03 0.0 0.0
GO:0000495 box H/ACA RNA 3'-end processing 100.0% (3/3) 16.03 0.0 0.0
GO:0034964 box H/ACA RNA processing 100.0% (3/3) 16.03 0.0 0.0
GO:0031120 snRNA pseudouridine synthesis 100.0% (3/3) 14.87 0.0 0.0
GO:0072588 box H/ACA RNP complex 100.0% (3/3) 14.67 0.0 0.0
GO:0031429 box H/ACA snoRNP complex 100.0% (3/3) 14.67 0.0 0.0
GO:0040031 snRNA modification 100.0% (3/3) 13.61 0.0 0.0
GO:1990481 mRNA pseudouridine synthesis 100.0% (3/3) 13.24 0.0 0.0
GO:0031118 rRNA pseudouridine synthesis 100.0% (3/3) 12.97 0.0 0.0
GO:0016074 sno(s)RNA metabolic process 100.0% (3/3) 11.87 0.0 0.0
GO:0043144 sno(s)RNA processing 100.0% (3/3) 11.89 0.0 0.0
GO:0043628 regulatory ncRNA 3'-end processing 100.0% (3/3) 11.93 0.0 0.0
GO:0031126 sno(s)RNA 3'-end processing 100.0% (3/3) 11.93 0.0 0.0
GO:0016556 mRNA modification 100.0% (3/3) 11.54 0.0 0.0
GO:0005732 sno(s)RNA-containing ribonucleoprotein complex 100.0% (3/3) 11.18 0.0 0.0
GO:0009982 pseudouridine synthase activity 100.0% (3/3) 10.85 0.0 0.0
GO:0001522 pseudouridine synthesis 100.0% (3/3) 10.79 0.0 0.0
GO:0016073 snRNA metabolic process 100.0% (3/3) 10.66 0.0 0.0
GO:0000154 rRNA modification 100.0% (3/3) 10.45 0.0 0.0
GO:0070918 regulatory ncRNA processing 100.0% (3/3) 9.9 0.0 0.0
GO:0031123 RNA 3'-end processing 100.0% (3/3) 9.31 0.0 0.0
GO:0016866 intramolecular transferase activity 100.0% (3/3) 9.24 0.0 0.0
GO:0006364 rRNA processing 100.0% (3/3) 8.0 0.0 0.0
GO:0016072 rRNA metabolic process 100.0% (3/3) 7.89 0.0 0.0
GO:0016853 isomerase activity 100.0% (3/3) 7.61 0.0 0.0
GO:0016071 mRNA metabolic process 100.0% (3/3) 7.44 0.0 0.0
GO:0009451 RNA modification 100.0% (3/3) 7.34 0.0 0.0
GO:0034470 ncRNA processing 100.0% (3/3) 7.12 0.0 1e-06
GO:1990904 ribonucleoprotein complex 100.0% (3/3) 6.86 1e-06 1e-06
GO:0034660 ncRNA metabolic process 100.0% (3/3) 6.64 1e-06 2e-06
GO:0006396 RNA processing 100.0% (3/3) 6.38 2e-06 3e-06
GO:0140513 nuclear protein-containing complex 100.0% (3/3) 6.07 3e-06 6e-06
GO:1902494 catalytic complex 100.0% (3/3) 5.93 4e-06 8e-06
GO:0003723 RNA binding 100.0% (3/3) 5.5 1.1e-05 1.8e-05
GO:0016070 RNA metabolic process 100.0% (3/3) 5.36 1.4e-05 2.3e-05
GO:0090304 nucleic acid metabolic process 100.0% (3/3) 4.65 6.4e-05 0.000101
GO:0032991 protein-containing complex 100.0% (3/3) 4.43 9.9e-05 0.000153
GO:0006139 nucleobase-containing compound metabolic process 100.0% (3/3) 4.41 0.000104 0.000156
GO:0046483 heterocycle metabolic process 100.0% (3/3) 4.31 0.000128 0.000186
GO:0006725 cellular aromatic compound metabolic process 100.0% (3/3) 4.28 0.000137 0.000195
GO:1901360 organic cyclic compound metabolic process 100.0% (3/3) 4.24 0.000149 0.000207
GO:0034641 cellular nitrogen compound metabolic process 100.0% (3/3) 4.23 0.000153 0.000207
GO:0043412 macromolecule modification 100.0% (3/3) 4.15 0.000179 0.000237
GO:0003676 nucleic acid binding 100.0% (3/3) 3.93 0.000284 0.000368
GO:0043170 macromolecule metabolic process 100.0% (3/3) 3.2 0.001291 0.001635
GO:0044237 cellular metabolic process 100.0% (3/3) 3.09 0.001612 0.001998
GO:0006807 nitrogen compound metabolic process 100.0% (3/3) 3.05 0.001757 0.002131
GO:0044238 primary metabolic process 100.0% (3/3) 2.8 0.002981 0.003467
GO:0097159 organic cyclic compound binding 100.0% (3/3) 2.8 0.002959 0.003514
GO:0071704 organic substance metabolic process 100.0% (3/3) 2.71 0.003573 0.004074
GO:0008152 metabolic process 100.0% (3/3) 2.64 0.004129 0.004615
GO:0003824 catalytic activity 100.0% (3/3) 2.47 0.005929 0.006499
GO:0009987 cellular process 100.0% (3/3) 2.44 0.006253 0.006724
GO:0005575 cellular_component 100.0% (3/3) 2.32 0.00799 0.008434
GO:0005488 binding 100.0% (3/3) 2.15 0.01149 0.011908
GO:0008150 biological_process 100.0% (3/3) 1.85 0.021524 0.021909
GO:0003674 molecular_function 100.0% (3/3) 1.5 0.044202 0.044202
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (3) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms