Coexpression cluster: Cluster_2426 (Co-expression clusters of Hoang et al 2017 (PRJNA356226))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0099512 supramolecular fiber 7.55% (4/53) 5.21 5e-06 0.000358
GO:0099081 supramolecular polymer 7.55% (4/53) 5.21 5e-06 0.000358
GO:0099513 polymeric cytoskeletal fiber 7.55% (4/53) 5.22 5e-06 0.000591
GO:0071669 plant-type cell wall organization or biogenesis 7.55% (4/53) 5.27 4e-06 0.000768
GO:0000271 polysaccharide biosynthetic process 7.55% (4/53) 4.78 1.5e-05 0.000832
GO:0005975 carbohydrate metabolic process 13.21% (7/53) 3.14 1.4e-05 0.000909
GO:0071554 cell wall organization or biogenesis 7.55% (4/53) 4.62 2.3e-05 0.001099
GO:0005525 GTP binding 7.55% (4/53) 4.38 4.3e-05 0.001201
GO:0032561 guanyl ribonucleotide binding 7.55% (4/53) 4.38 4.3e-05 0.001201
GO:0007017 microtubule-based process 7.55% (4/53) 4.27 5.9e-05 0.001211
GO:0030243 cellulose metabolic process 5.66% (3/53) 5.37 5.7e-05 0.001224
GO:0019001 guanyl nucleotide binding 7.55% (4/53) 4.34 4.9e-05 0.001259
GO:0005874 microtubule 7.55% (4/53) 5.34 3e-06 0.001263
GO:0030244 cellulose biosynthetic process 5.66% (3/53) 5.37 5.7e-05 0.001291
GO:0099080 supramolecular complex 7.55% (4/53) 4.48 3.4e-05 0.001303
GO:0015631 tubulin binding 7.55% (4/53) 4.41 4.1e-05 0.001314
GO:0016051 carbohydrate biosynthetic process 7.55% (4/53) 4.29 5.5e-05 0.001333
GO:0008017 microtubule binding 7.55% (4/53) 4.5 3.2e-05 0.001361
GO:0005976 polysaccharide metabolic process 7.55% (4/53) 4.19 7.2e-05 0.001403
GO:0016757 glycosyltransferase activity 11.32% (6/53) 3.25 4.1e-05 0.00143
GO:0051273 beta-glucan metabolic process 5.66% (3/53) 5.04 0.000112 0.001888
GO:0009832 plant-type cell wall biogenesis 5.66% (3/53) 5.06 0.000106 0.001964
GO:0051274 beta-glucan biosynthetic process 5.66% (3/53) 5.04 0.000112 0.001968
GO:0005200 structural constituent of cytoskeleton 3.77% (2/53) 6.91 0.000133 0.002146
GO:0110165 cellular anatomical entity 39.62% (21/53) 1.16 0.000141 0.00219
GO:0042546 cell wall biogenesis 5.66% (3/53) 4.82 0.000173 0.002584
GO:0009250 glucan biosynthetic process 5.66% (3/53) 4.68 0.000233 0.003353
GO:0008092 cytoskeletal protein binding 7.55% (4/53) 3.66 0.000295 0.004086
GO:0008194 UDP-glycosyltransferase activity 7.55% (4/53) 3.49 0.000456 0.006101
GO:0003674 molecular_function 58.49% (31/53) 0.73 0.000494 0.006394
GO:0044042 glucan metabolic process 5.66% (3/53) 4.26 0.000538 0.006733
GO:0044085 cellular component biogenesis 5.66% (3/53) 4.19 0.000624 0.007116
GO:0003824 catalytic activity 37.74% (20/53) 1.06 0.000596 0.007221
GO:0016740 transferase activity 22.64% (12/53) 1.55 0.000616 0.00724
GO:0022402 cell cycle process 7.55% (4/53) 3.35 0.000658 0.007295
GO:0007131 reciprocal meiotic recombination 3.77% (2/53) 5.68 0.000729 0.007441
GO:0035825 homologous recombination 3.77% (2/53) 5.68 0.000729 0.007441
GO:0140527 reciprocal homologous recombination 3.77% (2/53) 5.68 0.000729 0.007441
GO:0005575 cellular_component 39.62% (21/53) 0.99 0.000809 0.008045
GO:0071840 cellular component organization or biogenesis 13.21% (7/53) 2.16 0.000911 0.008833
GO:0000278 mitotic cell cycle 3.77% (2/53) 5.49 0.000937 0.008864
GO:0019200 carbohydrate kinase activity 3.77% (2/53) 5.47 0.00097 0.008961
GO:0035251 UDP-glucosyltransferase activity 5.66% (3/53) 3.92 0.001056 0.009525
GO:0070592 cell wall polysaccharide biosynthetic process 3.77% (2/53) 5.33 0.00117 0.010315
GO:0005737 cytoplasm 13.21% (7/53) 2.04 0.001513 0.013045
GO:0007049 cell cycle 3.77% (2/53) 5.02 0.0018 0.01455
GO:0046527 glucosyltransferase activity 5.66% (3/53) 3.64 0.00184 0.014573
GO:0016760 cellulose synthase (UDP-forming) activity 3.77% (2/53) 5.02 0.001785 0.014735
GO:0016759 cellulose synthase activity 3.77% (2/53) 4.97 0.001907 0.014801
GO:0009833 plant-type primary cell wall biogenesis 3.77% (2/53) 5.03 0.00177 0.014929
GO:0045229 external encapsulating structure organization 3.77% (2/53) 4.92 0.00205 0.015593
GO:0010383 cell wall polysaccharide metabolic process 3.77% (2/53) 4.87 0.002191 0.01635
GO:0046658 obsolete anchored component of plasma membrane 3.77% (2/53) 4.67 0.002878 0.021069
GO:0007018 microtubule-based movement 3.77% (2/53) 4.66 0.002935 0.021088
GO:0044036 cell wall macromolecule metabolic process 3.77% (2/53) 4.63 0.003025 0.021337
GO:0003777 microtubule motor activity 3.77% (2/53) 4.6 0.003168 0.021951
GO:0004478 methionine adenosyltransferase activity 1.89% (1/53) 8.22 0.003346 0.022384
GO:0005464 UDP-xylose transmembrane transporter activity 1.89% (1/53) 8.22 0.003346 0.022384
GO:0035252 UDP-xylosyltransferase activity 1.89% (1/53) 8.15 0.003522 0.022402
GO:0003878 ATP citrate synthase activity 1.89% (1/53) 8.18 0.003434 0.022583
GO:0044272 sulfur compound biosynthetic process 3.77% (2/53) 4.52 0.00352 0.022761
GO:0006556 S-adenosylmethionine biosynthetic process 1.89% (1/53) 7.98 0.003961 0.02479
GO:1901265 nucleoside phosphate binding 18.87% (10/53) 1.38 0.004433 0.026878
GO:0000166 nucleotide binding 18.87% (10/53) 1.38 0.004433 0.026878
GO:0009059 macromolecule biosynthetic process 7.55% (4/53) 2.58 0.00455 0.02716
GO:0008150 biological_process 45.28% (24/53) 0.7 0.004905 0.028834
GO:0009987 cellular process 33.96% (18/53) 0.88 0.005144 0.028925
GO:0046500 S-adenosylmethionine metabolic process 1.89% (1/53) 7.64 0.005015 0.029042
GO:0044249 cellular biosynthetic process 11.32% (6/53) 1.91 0.005104 0.029124
GO:1901363 heterocyclic compound binding 18.87% (10/53) 1.34 0.005364 0.029734
GO:0034410 cell wall beta-glucan biosynthetic process 1.89% (1/53) 7.36 0.006068 0.029801
GO:0034406 cell wall beta-glucan metabolic process 1.89% (1/53) 7.36 0.006068 0.029801
GO:0052541 plant-type cell wall cellulose metabolic process 1.89% (1/53) 7.36 0.006068 0.029801
GO:0052324 plant-type cell wall cellulose biosynthetic process 1.89% (1/53) 7.36 0.006068 0.029801
GO:1903046 meiotic cell cycle process 3.77% (2/53) 4.19 0.005459 0.029832
GO:0036094 small molecule binding 18.87% (10/53) 1.33 0.005621 0.03029
GO:0003774 cytoskeletal motor activity 3.77% (2/53) 4.15 0.005769 0.030664
GO:0043733 DNA-3-methylbase glycosylase activity 1.89% (1/53) 7.38 0.00598 0.030937
GO:0008725 DNA-3-methyladenine glycosylase activity 1.89% (1/53) 7.38 0.00598 0.030937
GO:0035639 purine ribonucleoside triphosphate binding 15.09% (8/53) 1.51 0.006439 0.031231
GO:0003905 alkylbase DNA N-glycosylase activity 1.89% (1/53) 7.24 0.006594 0.031584
GO:0043167 ion binding 22.64% (12/53) 1.14 0.006721 0.031801
GO:0005829 cytosol 7.55% (4/53) 2.41 0.006825 0.031903
GO:0070085 glycosylation 3.77% (2/53) 3.98 0.007292 0.033681
GO:0032553 ribonucleotide binding 16.98% (9/53) 1.33 0.008483 0.034648
GO:1901576 organic substance biosynthetic process 11.32% (6/53) 1.79 0.007599 0.034688
GO:0005802 trans-Golgi network 3.77% (2/53) 3.93 0.007805 0.03481
GO:0010215 cellulose microfibril organization 1.89% (1/53) 7.01 0.007732 0.034885
GO:0000226 microtubule cytoskeleton organization 3.77% (2/53) 3.86 0.00848 0.035003
GO:0034284 response to monosaccharide 1.89% (1/53) 6.88 0.008432 0.035179
GO:0009743 response to carbohydrate 1.89% (1/53) 6.88 0.008432 0.035179
GO:0009746 response to hexose 1.89% (1/53) 6.88 0.008432 0.035179
GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity 1.89% (1/53) 6.88 0.008432 0.035179
GO:0009749 response to glucose 1.89% (1/53) 6.88 0.008432 0.035179
GO:0097367 carbohydrate derivative binding 16.98% (9/53) 1.32 0.008894 0.035945
GO:0016758 hexosyltransferase activity 5.66% (3/53) 2.86 0.00828 0.03651
GO:0098791 Golgi apparatus subcompartment 3.77% (2/53) 3.8 0.009245 0.036979
GO:0043062 extracellular structure organization 1.89% (1/53) 6.66 0.009831 0.037395
GO:0030198 extracellular matrix organization 1.89% (1/53) 6.66 0.009831 0.037395
GO:0008865 fructokinase activity 1.89% (1/53) 6.71 0.009481 0.037538
GO:0031984 organelle subcompartment 3.77% (2/53) 3.76 0.009683 0.037568
GO:0009058 biosynthetic process 11.32% (6/53) 1.71 0.009672 0.037907
GO:0004396 hexokinase activity 1.89% (1/53) 6.6 0.010267 0.038305
GO:0017076 purine nucleotide binding 16.98% (9/53) 1.29 0.010235 0.038557
GO:0006000 fructose metabolic process 1.89% (1/53) 6.49 0.011053 0.040843
GO:0042285 xylosyltransferase activity 1.89% (1/53) 6.47 0.011227 0.041096
GO:0000774 adenyl-nucleotide exchange factor activity 1.89% (1/53) 6.42 0.011576 0.041977
GO:0016157 sucrose synthase activity 1.89% (1/53) 6.37 0.012012 0.043154
GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer 1.89% (1/53) 6.29 0.012709 0.044425
GO:0010417 glucuronoxylan biosynthetic process 1.89% (1/53) 6.29 0.012709 0.044425
GO:0010413 glucuronoxylan metabolic process 1.89% (1/53) 6.29 0.012709 0.044425
GO:0022414 reproductive process 3.77% (2/53) 3.51 0.01357 0.047011
GO:0009664 plant-type cell wall organization 1.89% (1/53) 6.16 0.013928 0.047823
GO:0007010 cytoskeleton organization 3.77% (2/53) 3.47 0.014324 0.048329
GO:0006310 DNA recombination 3.77% (2/53) 3.47 0.014219 0.048395
GO:0006790 sulfur compound metabolic process 3.77% (2/53) 3.44 0.014761 0.048952
GO:0003924 GTPase activity 3.77% (2/53) 3.44 0.014735 0.049285
GO:0043168 anion binding 16.98% (9/53) 1.2 0.01501 0.049353
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (53) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms