Coexpression cluster: Cluster_1340 (Co-expression clusters of Hoang et al 2017 (PRJNA356226))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0000104 succinate dehydrogenase activity 4.62% (3/65) 10.51 0.0 0.0
GO:0008177 succinate dehydrogenase (ubiquinone) activity 4.62% (3/65) 10.51 0.0 0.0
GO:0098803 respiratory chain complex 7.69% (5/65) 7.04 0.0 0.0
GO:0006121 mitochondrial electron transport, succinate to ubiquinone 4.62% (3/65) 9.67 0.0 1e-06
GO:0045281 succinate dehydrogenase complex 4.62% (3/65) 9.3 0.0 1e-06
GO:0045283 fumarate reductase complex 4.62% (3/65) 9.33 0.0 1e-06
GO:0045257 succinate dehydrogenase complex (ubiquinone) 4.62% (3/65) 9.33 0.0 1e-06
GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) 4.62% (3/65) 9.33 0.0 1e-06
GO:0032991 protein-containing complex 24.62% (16/65) 2.41 0.0 2e-06
GO:0005575 cellular_component 49.23% (32/65) 1.3 0.0 6e-06
GO:1902494 catalytic complex 13.85% (9/65) 3.08 1e-06 4.8e-05
GO:0019646 aerobic electron transport chain 4.62% (3/65) 6.91 2e-06 8.9e-05
GO:0042393 histone binding 6.15% (4/65) 5.36 3e-06 0.000107
GO:0022904 respiratory electron transport chain 4.62% (3/65) 6.4 7e-06 0.000205
GO:0098796 membrane protein complex 9.23% (6/65) 3.72 7e-06 0.000213
GO:0009060 aerobic respiration 4.62% (3/65) 6.28 9e-06 0.000245
GO:0045333 cellular respiration 4.62% (3/65) 6.24 1e-05 0.000252
GO:0045277 respiratory chain complex IV 3.08% (2/65) 8.32 1.9e-05 0.000467
GO:0005634 nucleus 16.92% (11/65) 2.19 2.5e-05 0.00058
GO:0015980 energy derivation by oxidation of organic compounds 4.62% (3/65) 5.66 3.1e-05 0.000696
GO:0009055 electron transfer activity 4.62% (3/65) 5.46 4.8e-05 0.001007
GO:0022900 electron transport chain 4.62% (3/65) 5.37 5.8e-05 0.001163
GO:0098800 inner mitochondrial membrane protein complex 4.62% (3/65) 5.32 6.3e-05 0.001218
GO:0070069 cytochrome complex 3.08% (2/65) 7.38 7e-05 0.001237
GO:0008150 biological_process 50.77% (33/65) 0.87 7.5e-05 0.001285
GO:0003676 nucleic acid binding 21.54% (14/65) 1.71 7e-05 0.001288
GO:1990204 oxidoreductase complex 4.62% (3/65) 5.11 9.8e-05 0.001502
GO:0032561 guanyl ribonucleotide binding 6.15% (4/65) 4.09 9.7e-05 0.001532
GO:0005525 GTP binding 6.15% (4/65) 4.09 9.7e-05 0.001532
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors 4.62% (3/65) 5.05 0.000111 0.001592
GO:0019001 guanyl nucleotide binding 6.15% (4/65) 4.05 0.000109 0.001603
GO:0006091 generation of precursor metabolites and energy 6.15% (4/65) 4.01 0.00012 0.00166
GO:0043231 intracellular membrane-bounded organelle 21.54% (14/65) 1.62 0.000139 0.001863
GO:0043227 membrane-bounded organelle 21.54% (14/65) 1.61 0.00015 0.001956
GO:0009889 regulation of biosynthetic process 13.85% (9/65) 2.13 0.000204 0.002101
GO:0097159 organic cyclic compound binding 32.31% (21/65) 1.17 0.000195 0.00211
GO:0051252 regulation of RNA metabolic process 12.31% (8/65) 2.33 0.000191 0.002119
GO:0031326 regulation of cellular biosynthetic process 13.85% (9/65) 2.13 0.000203 0.00214
GO:0010468 regulation of gene expression 13.85% (9/65) 2.17 0.000169 0.002141
GO:0043226 organelle 23.08% (15/65) 1.5 0.000189 0.002152
GO:0010556 regulation of macromolecule biosynthetic process 13.85% (9/65) 2.16 0.000178 0.002189
GO:0043229 intracellular organelle 23.08% (15/65) 1.5 0.000189 0.002206
GO:0005488 binding 43.08% (28/65) 0.93 0.000188 0.002251
GO:0098798 mitochondrial protein-containing complex 4.62% (3/65) 4.67 0.000238 0.0024
GO:0019219 regulation of nucleobase-containing compound metabolic process 12.31% (8/65) 2.27 0.00025 0.002456
GO:0140535 intracellular protein-containing complex 7.69% (5/65) 3.1 0.000304 0.002929
GO:0009057 macromolecule catabolic process 7.69% (5/65) 3.09 0.000317 0.00299
GO:0060255 regulation of macromolecule metabolic process 13.85% (9/65) 2.03 0.000347 0.003203
GO:0031323 regulation of cellular metabolic process 13.85% (9/65) 2.02 0.000363 0.003278
GO:0050794 regulation of cellular process 16.92% (11/65) 1.75 0.000381 0.003309
GO:0003746 translation elongation factor activity 3.08% (2/65) 6.16 0.000375 0.003324
GO:0019222 regulation of metabolic process 13.85% (9/65) 1.97 0.000456 0.003883
GO:0110165 cellular anatomical entity 35.38% (23/65) 1.0 0.000493 0.004119
GO:0050789 regulation of biological process 16.92% (11/65) 1.68 0.000576 0.004554
GO:0003723 RNA binding 10.77% (7/65) 2.29 0.000573 0.004612
GO:0051171 regulation of nitrogen compound metabolic process 12.31% (8/65) 2.09 0.000569 0.004671
GO:0080090 regulation of primary metabolic process 12.31% (8/65) 2.08 0.000606 0.004706
GO:0050660 flavin adenine dinucleotide binding 4.62% (3/65) 4.13 0.000707 0.005398
GO:2001141 regulation of RNA biosynthetic process 10.77% (7/65) 2.21 0.000806 0.005758
GO:0006355 regulation of DNA-templated transcription 10.77% (7/65) 2.21 0.000806 0.005758
GO:0051603 proteolysis involved in protein catabolic process 6.15% (4/65) 3.28 0.000801 0.005916
GO:0006414 translational elongation 3.08% (2/65) 5.61 0.0008 0.006003
GO:0006338 chromatin remodeling 4.62% (3/65) 4.02 0.000887 0.006235
GO:1901575 organic substance catabolic process 9.23% (6/65) 2.42 0.00091 0.006299
GO:0065007 biological regulation 16.92% (11/65) 1.57 0.001031 0.007027
GO:0019774 proteasome core complex, beta-subunit complex 1.54% (1/65) 9.85 0.001081 0.007257
GO:0006325 chromatin organization 4.62% (3/65) 3.89 0.001134 0.007501
GO:0009056 catabolic process 9.23% (6/65) 2.35 0.001174 0.00765
GO:0010498 proteasomal protein catabolic process 4.62% (3/65) 3.82 0.001298 0.008331
GO:0003924 GTPase activity 4.62% (3/65) 3.73 0.00155 0.009807
GO:1901565 organonitrogen compound catabolic process 6.15% (4/65) 3.0 0.001623 0.010126
GO:0030163 protein catabolic process 4.62% (3/65) 3.7 0.001655 0.010185
GO:0003674 molecular_function 53.85% (35/65) 0.61 0.001737 0.010544
GO:0009555 pollen development 1.54% (1/65) 9.09 0.001837 0.010999
GO:0071824 protein-DNA complex organization 4.62% (3/65) 3.57 0.002154 0.012723
GO:0002151 G-quadruplex RNA binding 1.54% (1/65) 8.27 0.00324 0.018401
GO:0044665 MLL1/2 complex 1.54% (1/65) 8.27 0.00324 0.018401
GO:0071339 MLL1 complex 1.54% (1/65) 8.27 0.00324 0.018401
GO:0006511 ubiquitin-dependent protein catabolic process 4.62% (3/65) 3.34 0.00332 0.018616
GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor 1.54% (1/65) 8.09 0.003671 0.020078
GO:0004784 superoxide dismutase activity 1.54% (1/65) 8.09 0.003671 0.020078
GO:0044545 NSL complex 1.54% (1/65) 7.93 0.004102 0.022162
GO:0048229 gametophyte development 1.54% (1/65) 7.89 0.00421 0.02247
GO:0019941 modification-dependent protein catabolic process 4.62% (3/65) 3.21 0.004323 0.022532
GO:0043565 sequence-specific DNA binding 6.15% (4/65) 2.61 0.004309 0.022723
GO:0046624 sphingolipid transporter activity 1.54% (1/65) 7.59 0.005179 0.023899
GO:0120016 sphingolipid transfer activity 1.54% (1/65) 7.59 0.005179 0.023899
GO:1902388 ceramide 1-phosphate transfer activity 1.54% (1/65) 7.59 0.005179 0.023899
GO:0120017 ceramide transfer activity 1.54% (1/65) 7.59 0.005179 0.023899
GO:1902387 ceramide 1-phosphate binding 1.54% (1/65) 7.59 0.005179 0.023899
GO:0035627 ceramide transport 1.54% (1/65) 7.59 0.005179 0.023899
GO:0097001 ceramide binding 1.54% (1/65) 7.59 0.005179 0.023899
GO:0046625 sphingolipid binding 1.54% (1/65) 7.59 0.005179 0.023899
GO:0008152 metabolic process 29.23% (19/65) 0.87 0.005422 0.024762
GO:0043632 modification-dependent macromolecule catabolic process 4.62% (3/65) 3.15 0.004848 0.024974
GO:0008135 translation factor activity, RNA binding 3.08% (2/65) 4.26 0.005021 0.025275
GO:0090079 translation regulator activity, nucleic acid binding 3.08% (2/65) 4.26 0.005021 0.025275
GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex 1.54% (1/65) 7.45 0.005717 0.025843
GO:0017111 ribonucleoside triphosphate phosphatase activity 6.15% (4/65) 2.48 0.005875 0.026024
GO:0120009 intermembrane lipid transfer 1.54% (1/65) 7.42 0.005824 0.026063
GO:0045182 translation regulator activity 3.08% (2/65) 4.08 0.006383 0.027723
GO:0003691 double-stranded telomeric DNA binding 1.54% (1/65) 7.27 0.00647 0.027825
GO:0097363 protein O-acetylglucosaminyltransferase activity 1.54% (1/65) 7.29 0.006362 0.027905
GO:0016462 pyrophosphatase activity 6.15% (4/65) 2.38 0.007416 0.031591
GO:0005956 protein kinase CK2 complex 1.54% (1/65) 7.02 0.007651 0.032281
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 6.15% (4/65) 2.36 0.007863 0.032554
GO:0043168 anion binding 16.92% (11/65) 1.19 0.007804 0.032614
GO:0016817 hydrolase activity, acting on acid anhydrides 6.15% (4/65) 2.34 0.008123 0.033015
GO:0004602 glutathione peroxidase activity 1.54% (1/65) 6.95 0.008081 0.033145
GO:0019538 protein metabolic process 15.38% (10/65) 1.24 0.00887 0.035723
GO:0050685 positive regulation of mRNA processing 1.54% (1/65) 6.72 0.009475 0.036818
GO:0004332 fructose-bisphosphate aldolase activity 1.54% (1/65) 6.72 0.009475 0.036818
GO:0033120 positive regulation of RNA splicing 1.54% (1/65) 6.72 0.009475 0.036818
GO:0048026 positive regulation of mRNA splicing, via spliceosome 1.54% (1/65) 6.72 0.009475 0.036818
GO:0016491 oxidoreductase activity 9.23% (6/65) 1.72 0.009628 0.03709
GO:0006801 superoxide metabolic process 1.54% (1/65) 6.59 0.010332 0.039456
GO:0006493 protein O-linked glycosylation 1.54% (1/65) 6.57 0.010439 0.039524
GO:0032993 protein-DNA complex 3.08% (2/65) 3.7 0.010531 0.039535
GO:0003712 transcription coregulator activity 3.08% (2/65) 3.65 0.011203 0.041704
GO:0016209 antioxidant activity 3.08% (2/65) 3.6 0.012012 0.044345
GO:0003690 double-stranded DNA binding 4.62% (3/65) 2.65 0.012341 0.044447
GO:0033962 P-body assembly 1.54% (1/65) 6.35 0.01215 0.044483
GO:0005844 polysome 1.54% (1/65) 6.32 0.012471 0.044553
GO:0005739 mitochondrion 4.62% (3/65) 2.65 0.012296 0.044649
GO:0120014 phospholipid transfer activity 1.54% (1/65) 6.28 0.012791 0.045332
GO:0120013 lipid transfer activity 1.54% (1/65) 6.21 0.013432 0.047225
GO:0005829 cytosol 6.15% (4/65) 2.12 0.013813 0.047806
GO:0006508 proteolysis 6.15% (4/65) 2.12 0.013732 0.047901
GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA 1.54% (1/65) 6.15 0.013965 0.047959
GO:0043167 ion binding 20.0% (13/65) 0.96 0.014168 0.048282
GO:0005839 proteasome core complex 1.54% (1/65) 6.11 0.014392 0.048669
GO:0071712 ER-associated misfolded protein catabolic process 1.54% (1/65) 6.07 0.014819 0.049732
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (65) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms