Coexpression cluster: Cluster_818 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016684 oxidoreductase activity, acting on peroxide as acceptor 3.7% (11/297) 4.08 0.0 0.0
GO:0004601 peroxidase activity 3.7% (11/297) 4.08 0.0 0.0
GO:0016209 antioxidant activity 3.7% (11/297) 3.87 0.0 0.0
GO:0006979 response to oxidative stress 3.7% (11/297) 3.88 0.0 0.0
GO:0046658 obsolete anchored component of plasma membrane 2.69% (8/297) 4.18 0.0 2e-06
GO:0016798 hydrolase activity, acting on glycosyl bonds 5.05% (15/297) 2.52 0.0 7e-06
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds 4.38% (13/297) 2.53 1e-06 3e-05
GO:0046906 tetrapyrrole binding 4.71% (14/297) 2.42 1e-06 3e-05
GO:0020037 heme binding 4.71% (14/297) 2.43 1e-06 3.2e-05
GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides 1.01% (3/297) 7.21 1e-06 4.4e-05
GO:0030570 pectate lyase activity 1.01% (3/297) 7.21 1e-06 4.4e-05
GO:0048364 root development 1.35% (4/297) 5.75 1e-06 4.7e-05
GO:0003824 catalytic activity 29.29% (87/297) 0.69 2e-06 5.6e-05
GO:0048367 shoot system development 1.35% (4/297) 5.3 4e-06 0.000117
GO:0048731 system development 1.35% (4/297) 5.1 7e-06 0.00019
GO:0016491 oxidoreductase activity 7.74% (23/297) 1.47 1.4e-05 0.000365
GO:0004190 aspartic-type endopeptidase activity 2.02% (6/297) 3.53 1.7e-05 0.000391
GO:0070001 aspartic-type peptidase activity 2.02% (6/297) 3.53 1.7e-05 0.000391
GO:0032502 developmental process 2.69% (8/297) 2.86 1.9e-05 0.000426
GO:0010410 hemicellulose metabolic process 1.68% (5/297) 3.91 2.5e-05 0.000531
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding 2.02% (6/297) 3.21 5.7e-05 0.000959
GO:0010383 cell wall polysaccharide metabolic process 1.68% (5/297) 3.71 4.8e-05 0.00097
GO:0045493 xylan catabolic process 1.01% (3/297) 5.2 8.3e-05 0.000975
GO:0009044 xylan 1,4-beta-xylosidase activity 1.01% (3/297) 5.2 8.3e-05 0.000975
GO:0097599 xylanase activity 1.01% (3/297) 5.2 8.3e-05 0.000975
GO:0044347 cell wall polysaccharide catabolic process 1.01% (3/297) 5.2 8.3e-05 0.000975
GO:2000895 hemicellulose catabolic process 1.01% (3/297) 5.2 8.3e-05 0.000975
GO:0031221 arabinan metabolic process 1.01% (3/297) 5.2 8.3e-05 0.000975
GO:0031222 arabinan catabolic process 1.01% (3/297) 5.2 8.3e-05 0.000975
GO:0004506 squalene monooxygenase activity 0.67% (2/297) 7.52 5.6e-05 0.000987
GO:0009505 plant-type cell wall 1.68% (5/297) 3.62 6.3e-05 0.000989
GO:0005618 cell wall 2.02% (6/297) 3.23 5.2e-05 0.001002
GO:0099402 plant organ development 1.35% (4/297) 4.32 5.5e-05 0.001009
GO:0030312 external encapsulating structure 2.02% (6/297) 3.18 6.2e-05 0.001018
GO:0044036 cell wall macromolecule metabolic process 1.68% (5/297) 3.47 0.000104 0.001101
GO:0016787 hydrolase activity 11.11% (33/297) 1.02 0.000108 0.001116
GO:0008374 O-acyltransferase activity 2.02% (6/297) 3.05 0.000103 0.001125
GO:0042743 hydrogen peroxide metabolic process 1.35% (4/297) 4.09 0.000103 0.001147
GO:0042744 hydrogen peroxide catabolic process 1.35% (4/297) 4.09 0.000103 0.001147
GO:0045491 xylan metabolic process 1.35% (4/297) 4.18 8.1e-05 0.001191
GO:0000987 cis-regulatory region sequence-specific DNA binding 2.02% (6/297) 3.12 8e-05 0.001206
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific 2.02% (6/297) 2.98 0.000135 0.001362
GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding 2.02% (6/297) 2.89 0.000187 0.001846
GO:0030154 cell differentiation 1.01% (3/297) 4.78 0.000196 0.001887
GO:0072593 reactive oxygen species metabolic process 1.35% (4/297) 3.83 0.000206 0.001895
GO:0006629 lipid metabolic process 5.05% (15/297) 1.58 0.000203 0.001909
GO:0043086 negative regulation of catalytic activity 1.01% (3/297) 4.58 0.000291 0.002624
GO:0044092 negative regulation of molecular function 1.01% (3/297) 4.53 0.000322 0.002845
GO:0009834 plant-type secondary cell wall biogenesis 1.01% (3/297) 4.36 0.000459 0.003975
GO:0046556 alpha-L-arabinofuranosidase activity 1.01% (3/297) 4.32 0.000492 0.004087
GO:0016998 cell wall macromolecule catabolic process 1.01% (3/297) 4.32 0.000492 0.004087
GO:0008725 DNA-3-methyladenine glycosylase activity 0.67% (2/297) 5.9 0.000543 0.004261
GO:0043733 DNA-3-methylbase glycosylase activity 0.67% (2/297) 5.9 0.000543 0.004261
GO:0004650 polygalacturonase activity 1.01% (3/297) 4.29 0.000525 0.004283
GO:0003905 alkylbase DNA N-glycosylase activity 0.67% (2/297) 5.75 0.00066 0.005085
GO:0016985 mannan endo-1,4-beta-mannosidase activity 0.67% (2/297) 5.57 0.000846 0.006404
GO:0004567 beta-mannosidase activity 0.67% (2/297) 5.56 0.000866 0.00644
GO:0048856 anatomical structure development 1.68% (5/297) 2.79 0.000883 0.006454
GO:0048869 cellular developmental process 1.01% (3/297) 3.91 0.001134 0.008149
GO:0005975 carbohydrate metabolic process 4.04% (12/297) 1.43 0.001967 0.013899
GO:0000976 transcription cis-regulatory region binding 2.02% (6/297) 2.15 0.002653 0.018146
GO:0001067 transcription regulatory region nucleic acid binding 2.02% (6/297) 2.15 0.002653 0.018146
GO:0042546 cell wall biogenesis 1.35% (4/297) 2.75 0.003175 0.02137
GO:0006949 syncytium formation 0.34% (1/297) 8.18 0.003455 0.022886
GO:0043565 sequence-specific DNA binding 3.03% (9/297) 1.59 0.00358 0.02335
GO:0000272 polysaccharide catabolic process 1.01% (3/297) 3.31 0.003656 0.023485
GO:1990837 sequence-specific double-stranded DNA binding 2.02% (6/297) 2.04 0.003819 0.02417
GO:0009055 electron transfer activity 1.01% (3/297) 3.27 0.003945 0.024596
GO:0016413 O-acetyltransferase activity 1.01% (3/297) 3.23 0.004247 0.025362
GO:0050790 regulation of catalytic activity 1.35% (4/297) 2.64 0.004165 0.025591
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups 2.36% (7/297) 1.82 0.004227 0.025601
GO:0065009 regulation of molecular function 1.35% (4/297) 2.58 0.004828 0.028434
GO:0016125 sterol metabolic process 1.01% (3/297) 3.13 0.005114 0.029703
GO:0004475 mannose-1-phosphate guanylyltransferase (GTP) activity 0.34% (1/297) 7.4 0.005915 0.03389
GO:0019104 DNA N-glycosylase activity 0.67% (2/297) 3.88 0.008333 0.046492
GO:0005976 polysaccharide metabolic process 1.68% (5/297) 2.03 0.008285 0.046839
GO:0004857 enzyme inhibitor activity 1.01% (3/297) 2.84 0.00896 0.048708
GO:0005794 Golgi apparatus 1.68% (5/297) 2.0 0.00892 0.049117
GO:0140678 molecular function inhibitor activity 1.01% (3/297) 2.82 0.009161 0.049167
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (297) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms