Coexpression cluster: Cluster_3198 (Co-expression clusters of Hoang et al 2017 (PRJNA356226))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009893 positive regulation of metabolic process 100.0% (2/2) 7.49 3.1e-05 0.000997
GO:0048518 positive regulation of biological process 100.0% (2/2) 7.28 4.2e-05 0.001124
GO:0010604 positive regulation of macromolecule metabolic process 100.0% (2/2) 7.49 3.1e-05 0.001245
GO:0051173 positive regulation of nitrogen compound metabolic process 100.0% (2/2) 7.51 3e-05 0.001616
GO:0071042 nuclear polyadenylation-dependent mRNA catabolic process 50.0% (1/2) 12.95 0.000126 0.001707
GO:0034476 U5 snRNA 3'-end processing 50.0% (1/2) 12.95 0.000126 0.001707
GO:0034473 U1 snRNA 3'-end processing 50.0% (1/2) 12.95 0.000126 0.001707
GO:0071047 polyadenylation-dependent mRNA catabolic process 50.0% (1/2) 12.95 0.000126 0.001707
GO:1990316 Atg1/ULK1 kinase complex 50.0% (1/2) 12.8 0.00014 0.001742
GO:0030242 autophagy of peroxisome 50.0% (1/2) 12.64 0.000156 0.00181
GO:0044248 cellular catabolic process 100.0% (2/2) 6.61 0.000104 0.002113
GO:0061709 reticulophagy 50.0% (1/2) 13.39 9.3e-05 0.002157
GO:0071046 nuclear polyadenylation-dependent ncRNA catabolic process 50.0% (1/2) 11.21 0.000423 0.002282
GO:0043634 polyadenylation-dependent ncRNA catabolic process 50.0% (1/2) 11.21 0.000423 0.002282
GO:0043633 polyadenylation-dependent RNA catabolic process 50.0% (1/2) 11.21 0.000423 0.002282
GO:0106354 tRNA surveillance 50.0% (1/2) 11.21 0.000423 0.002282
GO:0071035 nuclear polyadenylation-dependent rRNA catabolic process 50.0% (1/2) 11.21 0.000423 0.002282
GO:0071038 nuclear polyadenylation-dependent tRNA catabolic process 50.0% (1/2) 11.21 0.000423 0.002282
GO:0016078 tRNA catabolic process 50.0% (1/2) 11.21 0.000423 0.002282
GO:0071029 nuclear ncRNA surveillance 50.0% (1/2) 11.21 0.000423 0.002282
GO:0048522 positive regulation of cellular process 100.0% (2/2) 7.54 2.9e-05 0.002348
GO:0000467 exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 50.0% (1/2) 11.11 0.000453 0.002365
GO:0031331 positive regulation of cellular catabolic process 50.0% (1/2) 10.13 0.000892 0.002408
GO:0061014 positive regulation of mRNA catabolic process 50.0% (1/2) 10.13 0.000892 0.002408
GO:0031125 rRNA 3'-end processing 50.0% (1/2) 11.04 0.000476 0.002409
GO:1902494 catalytic complex 100.0% (2/2) 5.93 0.000269 0.00242
GO:0000422 autophagy of mitochondrion 50.0% (1/2) 10.43 0.000725 0.002448
GO:0034045 phagophore assembly site membrane 50.0% (1/2) 11.91 0.00026 0.002474
GO:0016236 macroautophagy 50.0% (1/2) 10.38 0.000749 0.002475
GO:0000291 nuclear-transcribed mRNA catabolic process, exonucleolytic 50.0% (1/2) 10.14 0.000888 0.002481
GO:0034661 ncRNA catabolic process 50.0% (1/2) 10.44 0.000722 0.002489
GO:0016075 rRNA catabolic process 50.0% (1/2) 10.44 0.000722 0.002489
GO:1905354 exoribonuclease complex 50.0% (1/2) 10.15 0.000882 0.002506
GO:0071028 nuclear mRNA surveillance 50.0% (1/2) 11.72 0.000296 0.002525
GO:0000045 autophagosome assembly 50.0% (1/2) 10.16 0.000875 0.002532
GO:1905037 autophagosome organization 50.0% (1/2) 10.16 0.000875 0.002532
GO:0010562 positive regulation of phosphorus metabolic process 50.0% (1/2) 10.6 0.000642 0.002538
GO:0045937 positive regulation of phosphate metabolic process 50.0% (1/2) 10.6 0.000642 0.002538
GO:0042327 positive regulation of phosphorylation 50.0% (1/2) 10.6 0.000642 0.002538
GO:0034472 snRNA 3'-end processing 50.0% (1/2) 10.56 0.000662 0.002554
GO:0044804 nucleophagy 50.0% (1/2) 10.9 0.000522 0.002565
GO:0034427 nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' 50.0% (1/2) 10.44 0.000719 0.002588
GO:0034727 piecemeal microautophagy of the nucleus 50.0% (1/2) 11.93 0.000256 0.002595
GO:0016237 microautophagy 50.0% (1/2) 11.93 0.000256 0.002595
GO:0061013 regulation of mRNA catabolic process 50.0% (1/2) 9.95 0.001012 0.002601
GO:0050779 RNA destabilization 50.0% (1/2) 10.17 0.000868 0.002605
GO:0061157 mRNA destabilization 50.0% (1/2) 10.17 0.000868 0.002605
GO:0019900 kinase binding 50.0% (1/2) 9.97 0.000998 0.002608
GO:0016180 snRNA processing 50.0% (1/2) 10.46 0.000712 0.002622
GO:0043488 regulation of mRNA stability 50.0% (1/2) 9.98 0.000988 0.002624
GO:0071027 nuclear RNA surveillance 50.0% (1/2) 10.74 0.000586 0.002636
GO:0000177 cytoplasmic exosome (RNase complex) 50.0% (1/2) 10.77 0.000572 0.002649
GO:0009056 catabolic process 100.0% (2/2) 5.79 0.000329 0.002662
GO:0031401 positive regulation of protein modification process 50.0% (1/2) 9.89 0.001055 0.00267
GO:0000176 nuclear exosome (RNase complex) 50.0% (1/2) 10.46 0.000709 0.00267
GO:0000178 exosome (RNase complex) 50.0% (1/2) 10.18 0.000862 0.002685
GO:0019901 protein kinase binding 50.0% (1/2) 10.79 0.000566 0.002695
GO:0001934 positive regulation of protein phosphorylation 50.0% (1/2) 10.62 0.000636 0.00271
GO:0080090 regulation of primary metabolic process 100.0% (2/2) 5.1 0.000853 0.00271
GO:0051171 regulation of nitrogen compound metabolic process 100.0% (2/2) 5.11 0.000837 0.002712
GO:0007033 vacuole organization 50.0% (1/2) 9.82 0.001108 0.00272
GO:0071025 RNA surveillance 50.0% (1/2) 10.65 0.000622 0.002725
GO:0043487 regulation of RNA stability 50.0% (1/2) 9.83 0.001098 0.002737
GO:1903313 positive regulation of mRNA metabolic process 50.0% (1/2) 9.72 0.001184 0.002781
GO:0031323 regulation of cellular metabolic process 100.0% (2/2) 4.87 0.001171 0.00279
GO:0034475 U4 snRNA 3'-end processing 50.0% (1/2) 11.36 0.000379 0.002794
GO:0060255 regulation of macromolecule metabolic process 100.0% (2/2) 4.88 0.001157 0.002797
GO:0043928 exonucleolytic catabolism of deadenylated mRNA 50.0% (1/2) 11.43 0.000363 0.002798
GO:0019222 regulation of metabolic process 100.0% (2/2) 4.82 0.001247 0.002846
GO:0016073 snRNA metabolic process 50.0% (1/2) 9.66 0.001238 0.002864
GO:1903008 organelle disassembly 50.0% (1/2) 9.58 0.001304 0.002934
GO:0007005 mitochondrion organization 50.0% (1/2) 9.29 0.0016 0.003551
GO:0006914 autophagy 50.0% (1/2) 9.2 0.0017 0.003672
GO:0061919 process utilizing autophagic mechanism 50.0% (1/2) 9.2 0.0017 0.003672
GO:0031325 positive regulation of cellular metabolic process 100.0% (2/2) 7.71 2.3e-05 0.003678
GO:0042325 regulation of phosphorylation 50.0% (1/2) 9.05 0.001886 0.003917
GO:1903311 regulation of mRNA metabolic process 50.0% (1/2) 9.08 0.001846 0.003935
GO:0001932 regulation of protein phosphorylation 50.0% (1/2) 9.05 0.00188 0.003954
GO:0031329 regulation of cellular catabolic process 50.0% (1/2) 8.91 0.002072 0.00425
GO:0032991 protein-containing complex 100.0% (2/2) 4.43 0.002144 0.004341
GO:0009896 positive regulation of catabolic process 50.0% (1/2) 8.75 0.002322 0.004643
GO:0019220 regulation of phosphate metabolic process 50.0% (1/2) 8.68 0.002438 0.004759
GO:0051174 regulation of phosphorus metabolic process 50.0% (1/2) 8.68 0.002438 0.004759
GO:0050794 regulation of cellular process 100.0% (2/2) 4.31 0.002541 0.0049
GO:1902554 serine/threonine protein kinase complex 50.0% (1/2) 8.56 0.002644 0.005039
GO:0031399 regulation of protein modification process 50.0% (1/2) 8.53 0.002711 0.005047
GO:1902911 protein kinase complex 50.0% (1/2) 8.53 0.002701 0.005087
GO:0050789 regulation of biological process 100.0% (2/2) 4.24 0.002804 0.005162
GO:0000956 nuclear-transcribed mRNA catabolic process 50.0% (1/2) 8.41 0.002937 0.005286
GO:0060090 molecular adaptor activity 50.0% (1/2) 8.42 0.00292 0.005315
GO:0022411 cellular component disassembly 50.0% (1/2) 8.38 0.003003 0.005346
GO:0031123 RNA 3'-end processing 50.0% (1/2) 8.31 0.003159 0.005563
GO:0051247 positive regulation of protein metabolic process 50.0% (1/2) 8.26 0.003252 0.005605
GO:0065007 biological regulation 100.0% (2/2) 4.14 0.003232 0.005629
GO:0070925 organelle assembly 50.0% (1/2) 8.17 0.003465 0.005909
GO:0006402 mRNA catabolic process 50.0% (1/2) 8.1 0.003648 0.006155
GO:0009894 regulation of catabolic process 50.0% (1/2) 8.02 0.00385 0.00643
GO:0006401 RNA catabolic process 50.0% (1/2) 7.85 0.004319 0.007139
GO:0010608 post-transcriptional regulation of gene expression 50.0% (1/2) 7.42 0.005846 0.009566
GO:0019899 enzyme binding 50.0% (1/2) 7.19 0.006858 0.011109
GO:0051254 positive regulation of RNA metabolic process 50.0% (1/2) 7.06 0.007461 0.011735
GO:0061695 transferase complex, transferring phosphorus-containing groups 50.0% (1/2) 7.07 0.007405 0.011761
GO:0051246 regulation of protein metabolic process 50.0% (1/2) 7.08 0.007362 0.011808
GO:0065008 regulation of biological quality 50.0% (1/2) 6.97 0.007948 0.012148
GO:0006364 rRNA processing 50.0% (1/2) 7.0 0.007799 0.012149
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 50.0% (1/2) 6.98 0.007882 0.012161
GO:0034655 nucleobase-containing compound catabolic process 50.0% (1/2) 6.95 0.008045 0.01218
GO:0010629 negative regulation of gene expression 50.0% (1/2) 6.93 0.0082 0.012301
GO:0016072 rRNA metabolic process 50.0% (1/2) 6.89 0.008436 0.012537
GO:0044270 cellular nitrogen compound catabolic process 50.0% (1/2) 6.83 0.00877 0.0128
GO:0046700 heterocycle catabolic process 50.0% (1/2) 6.83 0.00877 0.0128
GO:1901361 organic cyclic compound catabolic process 50.0% (1/2) 6.63 0.010039 0.014266
GO:0019439 aromatic compound catabolic process 50.0% (1/2) 6.66 0.009867 0.014272
GO:0006399 tRNA metabolic process 50.0% (1/2) 6.64 0.010029 0.014378
GO:0043632 modification-dependent macromolecule catabolic process 50.0% (1/2) 6.58 0.01039 0.014636
GO:0010558 negative regulation of macromolecule biosynthetic process 50.0% (1/2) 6.56 0.010552 0.014737
GO:0009890 negative regulation of biosynthetic process 50.0% (1/2) 6.52 0.010903 0.014969
GO:0031327 negative regulation of cellular biosynthetic process 50.0% (1/2) 6.52 0.010857 0.015033
GO:0016071 mRNA metabolic process 50.0% (1/2) 6.44 0.011512 0.015672
GO:0010605 negative regulation of macromolecule metabolic process 50.0% (1/2) 6.39 0.011893 0.016055
GO:0009892 negative regulation of metabolic process 50.0% (1/2) 6.36 0.012151 0.016134
GO:0031324 negative regulation of cellular metabolic process 50.0% (1/2) 6.37 0.012084 0.016179
GO:0044237 cellular metabolic process 100.0% (2/2) 3.09 0.01375 0.01811
GO:0034470 ncRNA processing 50.0% (1/2) 6.12 0.014339 0.018734
GO:0048523 negative regulation of cellular process 50.0% (1/2) 5.99 0.015713 0.020365
GO:0022607 cellular component assembly 50.0% (1/2) 5.96 0.016027 0.020444
GO:0048519 negative regulation of biological process 50.0% (1/2) 5.96 0.015994 0.020564
GO:0009057 macromolecule catabolic process 50.0% (1/2) 5.79 0.017997 0.022777
GO:1990234 transferase complex 50.0% (1/2) 5.75 0.018468 0.023193
GO:0034660 ncRNA metabolic process 50.0% (1/2) 5.64 0.019985 0.024904
GO:0006396 RNA processing 50.0% (1/2) 5.38 0.023944 0.02961
GO:0008152 metabolic process 100.0% (2/2) 2.64 0.025737 0.031586
GO:0006996 organelle organization 50.0% (1/2) 5.15 0.028057 0.034174
GO:0140513 nuclear protein-containing complex 50.0% (1/2) 5.07 0.029605 0.035791
GO:0009987 cellular process 100.0% (2/2) 2.44 0.033939 0.040727
GO:1901575 organic substance catabolic process 50.0% (1/2) 4.86 0.034199 0.040737
GO:0005575 cellular_component 100.0% (2/2) 2.32 0.039968 0.047262
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms