Coexpression cluster: Cluster_2301 (Co-expression clusters of Hoang et al 2017 (PRJNA356226))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors 2.9% (2/69) 8.39 1.7e-05 0.006832
GO:0009773 photosynthetic electron transport in photosystem I 2.9% (2/69) 7.84 3.7e-05 0.007329
GO:0000938 GARP complex 2.9% (2/69) 7.08 0.000106 0.010573
GO:0032456 endocytic recycling 2.9% (2/69) 7.21 8.9e-05 0.011797
GO:0019842 vitamin binding 4.35% (3/69) 4.64 0.000254 0.016822
GO:0009767 photosynthetic electron transport chain 2.9% (2/69) 6.51 0.000232 0.018505
GO:0033967 box C/D RNA metabolic process 1.45% (1/69) 9.92 0.001033 0.027407
GO:0140940 histone H2A methyltransferase activity 1.45% (1/69) 9.92 0.001033 0.027407
GO:0036009 protein-glutamine N-methyltransferase activity 1.45% (1/69) 9.92 0.001033 0.027407
GO:0034963 box C/D RNA processing 1.45% (1/69) 9.92 0.001033 0.027407
GO:0000494 box C/D RNA 3'-end processing 1.45% (1/69) 9.92 0.001033 0.027407
GO:1990259 histone H2AQ104 methyltransferase activity 1.45% (1/69) 9.92 0.001033 0.027407
GO:0005575 cellular_component 36.23% (25/69) 0.86 0.001271 0.028112
GO:0008298 intracellular mRNA localization 1.45% (1/69) 9.39 0.001492 0.028271
GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network 1.45% (1/69) 9.39 0.001492 0.028271
GO:0004750 D-ribulose-phosphate 3-epimerase activity 1.45% (1/69) 9.39 0.001492 0.028271
GO:0110165 cellular anatomical entity 33.33% (23/69) 0.92 0.001265 0.029624
GO:0001561 fatty acid alpha-oxidation 1.45% (1/69) 9.18 0.001721 0.031134
GO:0032991 protein-containing complex 14.49% (10/69) 1.65 0.001255 0.031214
GO:0051641 cellular localization 7.25% (5/69) 2.45 0.00227 0.03346
GO:0042147 retrograde transport, endosome to Golgi 2.9% (2/69) 5.84 0.000589 0.033486
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 2.9% (2/69) 4.85 0.002248 0.034414
GO:0006091 generation of precursor metabolites and energy 4.35% (3/69) 3.51 0.002424 0.03446
GO:0016769 transferase activity, transferring nitrogenous groups 2.9% (2/69) 4.87 0.002205 0.035096
GO:0008483 transaminase activity 2.9% (2/69) 4.87 0.002205 0.035096
GO:0010285 L,L-diaminopimelate aminotransferase activity 1.45% (1/69) 8.92 0.002065 0.03573
GO:0022900 electron transport chain 2.9% (2/69) 4.7 0.002787 0.03698
GO:0006403 RNA localization 1.45% (1/69) 8.5 0.002752 0.037771
GO:1990904 ribonucleoprotein complex 5.8% (4/69) 2.75 0.003017 0.038734
GO:0016482 cytosolic transport 2.9% (2/69) 5.62 0.000786 0.039127
GO:0007034 vacuolar transport 2.9% (2/69) 4.57 0.003284 0.039612
GO:0098876 vesicle-mediated transport to the plasma membrane 2.9% (2/69) 5.52 0.000905 0.040022
GO:0016859 cis-trans isomerase activity 2.9% (2/69) 4.59 0.003223 0.040091
GO:0008150 biological_process 43.48% (30/69) 0.64 0.003792 0.044386
GO:0009535 chloroplast thylakoid membrane 2.9% (2/69) 4.23 0.00524 0.047398
GO:0055035 plastid thylakoid membrane 2.9% (2/69) 4.23 0.00524 0.047398
GO:0044183 protein folding chaperone 2.9% (2/69) 4.16 0.005718 0.047411
GO:0030170 pyridoxal phosphate binding 2.9% (2/69) 4.38 0.004293 0.047461
GO:0070279 vitamin B6 binding 2.9% (2/69) 4.38 0.004293 0.047461
GO:0030891 VCB complex 1.45% (1/69) 7.47 0.005611 0.047515
GO:0009052 pentose-phosphate shunt, non-oxidative branch 1.45% (1/69) 7.5 0.005497 0.047559
GO:0043335 protein unfolding 1.45% (1/69) 7.8 0.004468 0.048066
GO:0016853 isomerase activity 4.35% (3/69) 3.09 0.005454 0.048241
GO:0009637 response to blue light 1.45% (1/69) 7.6 0.005154 0.048842
GO:0044262 obsolete cellular carbohydrate metabolic process 1.45% (1/69) 7.6 0.005154 0.048842
GO:0034357 photosynthetic membrane 2.9% (2/69) 4.11 0.006156 0.049003
GO:0042651 thylakoid membrane 2.9% (2/69) 4.11 0.006156 0.049003
GO:1990745 EARP complex 1.45% (1/69) 7.28 0.00641 0.049062
GO:0003867 4-aminobutyrate transaminase activity 1.45% (1/69) 7.31 0.006296 0.049133
GO:0016197 endosomal transport 2.9% (2/69) 4.3 0.00473 0.049536
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (69) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms