Coexpression cluster: Cluster_2041 (Co-expression clusters of Hoang et al 2017 (PRJNA356226))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0007008 outer mitochondrial membrane organization 2.5% (2/80) 11.55 0.0 5e-05
GO:0045040 protein insertion into mitochondrial outer membrane 2.5% (2/80) 11.55 0.0 5e-05
GO:0043226 organelle 26.25% (21/80) 1.69 1e-06 0.000137
GO:0043229 intracellular organelle 26.25% (21/80) 1.69 1e-06 0.000171
GO:0008150 biological_process 53.75% (43/80) 0.95 1e-06 0.000176
GO:0005742 mitochondrial outer membrane translocase complex 2.5% (2/80) 8.97 8e-06 0.000542
GO:0098799 outer mitochondrial membrane protein complex 2.5% (2/80) 8.97 8e-06 0.000542
GO:0005575 cellular_component 41.25% (33/80) 1.04 1.1e-05 0.000651
GO:0072594 establishment of protein localization to organelle 6.25% (5/80) 4.13 1.1e-05 0.000711
GO:0005488 binding 45.0% (36/80) 1.0 8e-06 0.000714
GO:0033365 protein localization to organelle 6.25% (5/80) 4.01 1.6e-05 0.000848
GO:0022402 cell cycle process 7.5% (6/80) 3.34 3.1e-05 0.001356
GO:0051668 localization within membrane 5.0% (4/80) 4.54 2.9e-05 0.001401
GO:0045184 establishment of protein localization 7.5% (6/80) 3.16 6.1e-05 0.001921
GO:0016043 cellular component organization 12.5% (10/80) 2.24 5.1e-05 0.001936
GO:0009987 cellular process 37.5% (30/80) 1.03 4.8e-05 0.001938
GO:0110165 cellular anatomical entity 36.25% (29/80) 1.04 5.9e-05 0.001987
GO:0003676 nucleic acid binding 20.0% (16/80) 1.61 5.7e-05 0.00203
GO:0006886 intracellular protein transport 6.25% (5/80) 3.54 7.6e-05 0.002289
GO:0043227 membrane-bounded organelle 20.0% (16/80) 1.5 0.000133 0.002366
GO:0090150 establishment of protein localization to membrane 3.75% (3/80) 4.97 0.00013 0.0024
GO:0006996 organelle organization 8.75% (7/80) 2.63 0.000145 0.00243
GO:0033036 macromolecule localization 7.5% (6/80) 3.0 0.000112 0.002459
GO:0007006 mitochondrial membrane organization 2.5% (2/80) 6.93 0.00013 0.002473
GO:0071702 organic substance transport 8.75% (7/80) 2.63 0.000144 0.002487
GO:0070727 cellular macromolecule localization 7.5% (6/80) 3.0 0.000111 0.002531
GO:0071840 cellular component organization or biogenesis 12.5% (10/80) 2.08 0.000124 0.002538
GO:0051649 establishment of localization in cell 7.5% (6/80) 2.96 0.000129 0.002542
GO:0043231 intracellular membrane-bounded organelle 20.0% (16/80) 1.51 0.000122 0.002571
GO:0008104 protein localization 7.5% (6/80) 3.01 0.000109 0.002604
GO:0046907 intracellular transport 7.5% (6/80) 3.01 0.000107 0.002667
GO:0090151 establishment of protein localization to mitochondrial membrane 2.5% (2/80) 7.08 0.000106 0.002747
GO:0006839 mitochondrial transport 3.75% (3/80) 5.1 0.000101 0.002754
GO:0051641 cellular localization 8.75% (7/80) 2.72 9.8e-05 0.002786
GO:0000922 spindle pole 2.5% (2/80) 6.7 0.000178 0.002823
GO:0051258 protein polymerization 2.5% (2/80) 6.73 0.000173 0.002824
GO:0000910 cytokinesis 2.5% (2/80) 6.52 0.000231 0.003377
GO:0000911 cytokinesis by cell plate formation 2.5% (2/80) 6.53 0.000228 0.003424
GO:0015031 protein transport 6.25% (5/80) 3.21 0.000222 0.003433
GO:0003674 molecular_function 55.0% (44/80) 0.64 0.000257 0.003668
GO:0071705 nitrogen compound transport 7.5% (6/80) 2.74 0.000298 0.004055
GO:0072657 protein localization to membrane 3.75% (3/80) 4.56 0.000298 0.004153
GO:0003690 double-stranded DNA binding 6.25% (5/80) 3.09 0.000325 0.004317
GO:0000776 kinetochore 2.5% (2/80) 6.2 0.00036 0.004666
GO:0043328 protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway 2.5% (2/80) 6.16 0.000377 0.004786
GO:0098798 mitochondrial protein-containing complex 3.75% (3/80) 4.37 0.000439 0.005454
GO:0003677 DNA binding 11.25% (9/80) 1.93 0.000586 0.007117
GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway 2.5% (2/80) 5.7 0.00071 0.008452
GO:0072655 establishment of protein localization to mitochondrion 2.5% (2/80) 5.66 0.000755 0.008452
GO:0070585 protein localization to mitochondrion 2.5% (2/80) 5.66 0.000755 0.008452
GO:0005634 nucleus 12.5% (10/80) 1.76 0.000737 0.008592
GO:0097435 supramolecular fiber organization 3.75% (3/80) 3.98 0.000962 0.010561
GO:0032509 endosome transport via multivesicular body sorting pathway 2.5% (2/80) 5.4 0.001073 0.010745
GO:0071985 multivesicular body sorting pathway 2.5% (2/80) 5.4 0.001073 0.010745
GO:0048578 positive regulation of long-day photoperiodism, flowering 1.25% (1/80) 9.87 0.001065 0.011052
GO:0003712 transcription coregulator activity 3.75% (3/80) 3.94 0.001039 0.011192
GO:0051234 establishment of localization 12.5% (10/80) 1.69 0.001064 0.011246
GO:0051179 localization 12.5% (10/80) 1.63 0.001399 0.013774
GO:0005813 centrosome 2.5% (2/80) 5.17 0.001465 0.013938
GO:0048582 positive regulation of post-embryonic development 1.25% (1/80) 9.42 0.001463 0.014163
GO:0008430 selenium binding 1.25% (1/80) 9.29 0.001596 0.014943
GO:0045324 late endosome to vacuole transport 2.5% (2/80) 5.08 0.001649 0.014949
GO:0061024 membrane organization 3.75% (3/80) 3.71 0.001626 0.014979
GO:0072665 protein localization to vacuole 2.5% (2/80) 5.01 0.001829 0.01607
GO:0072666 establishment of protein localization to vacuole 2.5% (2/80) 5.01 0.001829 0.01607
GO:0005815 microtubule organizing center 2.5% (2/80) 4.99 0.001876 0.016228
GO:0007005 mitochondrion organization 2.5% (2/80) 4.97 0.001938 0.016521
GO:0003681 bent DNA binding 1.25% (1/80) 8.97 0.001995 0.016753
GO:0005515 protein binding 17.5% (14/80) 1.22 0.002355 0.019488
GO:0006355 regulation of DNA-templated transcription 8.75% (7/80) 1.91 0.002718 0.021863
GO:2001141 regulation of RNA biosynthetic process 8.75% (7/80) 1.91 0.002718 0.021863
GO:0043130 ubiquitin binding 2.5% (2/80) 4.65 0.002967 0.022592
GO:0044877 protein-containing complex binding 5.0% (4/80) 2.77 0.00293 0.022609
GO:0043228 non-membrane-bounded organelle 6.25% (5/80) 2.32 0.003368 0.022627
GO:0051240 positive regulation of multicellular organismal process 1.25% (1/80) 8.35 0.003057 0.022673
GO:0051094 positive regulation of developmental process 1.25% (1/80) 8.35 0.003057 0.022673
GO:0006810 transport 11.25% (9/80) 1.6 0.002868 0.022745
GO:0010556 regulation of macromolecule biosynthetic process 10.0% (8/80) 1.69 0.003438 0.022824
GO:0070577 lysine-acetylated histone binding 1.25% (1/80) 8.23 0.003323 0.02286
GO:0140033 acetylation-dependent protein binding 1.25% (1/80) 8.23 0.003323 0.02286
GO:0017168 5-oxoprolinase (ATP-hydrolyzing) activity 1.25% (1/80) 8.42 0.002925 0.022877
GO:0043232 intracellular non-membrane-bounded organelle 6.25% (5/80) 2.32 0.003366 0.022884
GO:0015228 coenzyme A transmembrane transporter activity 1.25% (1/80) 8.02 0.003854 0.022921
GO:0035349 coenzyme A transmembrane transport 1.25% (1/80) 8.02 0.003854 0.022921
GO:0071077 adenosine 3',5'-bisphosphate transmembrane transporter activity 1.25% (1/80) 8.02 0.003854 0.022921
GO:0071106 adenosine 3',5'-bisphosphate transmembrane transport 1.25% (1/80) 8.02 0.003854 0.022921
GO:1990559 mitochondrial coenzyme A transmembrane transport 1.25% (1/80) 8.02 0.003854 0.022921
GO:0015880 coenzyme A transport 1.25% (1/80) 8.02 0.003854 0.022921
GO:0010499 proteasomal ubiquitin-independent protein catabolic process 1.25% (1/80) 8.29 0.00319 0.023058
GO:0015748 organophosphate ester transport 2.5% (2/80) 4.6 0.003164 0.023162
GO:0032182 ubiquitin-like protein binding 2.5% (2/80) 4.58 0.003254 0.023228
GO:0010468 regulation of gene expression 10.0% (8/80) 1.7 0.0033 0.023263
GO:0048586 regulation of long-day photoperiodism, flowering 1.25% (1/80) 7.97 0.003986 0.023465
GO:0051252 regulation of RNA metabolic process 8.75% (7/80) 1.83 0.003577 0.023474
GO:0048194 Golgi vesicle budding 1.25% (1/80) 8.07 0.003721 0.024144
GO:0009889 regulation of biosynthetic process 10.0% (8/80) 1.66 0.003841 0.024367
GO:0031326 regulation of cellular biosynthetic process 10.0% (8/80) 1.66 0.003824 0.024532
GO:0016192 vesicle-mediated transport 5.0% (4/80) 2.61 0.004338 0.025278
GO:0019219 regulation of nucleobase-containing compound metabolic process 8.75% (7/80) 1.78 0.004429 0.025288
GO:0007034 vacuolar transport 2.5% (2/80) 4.36 0.004385 0.025292
GO:0007051 spindle organization 2.5% (2/80) 4.32 0.004644 0.026257
GO:0030951 establishment or maintenance of microtubule cytoskeleton polarity 1.25% (1/80) 7.67 0.004914 0.02698
GO:0061863 microtubule plus end polymerase 1.25% (1/80) 7.67 0.004914 0.02698
GO:0030952 establishment or maintenance of cytoskeleton polarity 1.25% (1/80) 7.67 0.004914 0.02698
GO:0046785 microtubule polymerization 1.25% (1/80) 7.63 0.005047 0.027443
GO:0065007 biological regulation 13.75% (11/80) 1.27 0.005542 0.029853
GO:0060255 regulation of macromolecule metabolic process 10.0% (8/80) 1.56 0.005894 0.031451
GO:0016504 peptidase activator activity 1.25% (1/80) 7.38 0.005973 0.031582
GO:0009301 snRNA transcription 1.25% (1/80) 7.29 0.00637 0.031908
GO:0042795 snRNA transcription by RNA polymerase II 1.25% (1/80) 7.29 0.00637 0.031908
GO:0042796 snRNA transcription by RNA polymerase III 1.25% (1/80) 7.29 0.00637 0.031908
GO:0019185 snRNA-activating protein complex 1.25% (1/80) 7.29 0.00637 0.031908
GO:0031323 regulation of cellular metabolic process 10.0% (8/80) 1.55 0.006105 0.031982
GO:0061775 cohesin loader activity 1.25% (1/80) 7.26 0.006503 0.032287
GO:0016197 endosomal transport 2.5% (2/80) 4.09 0.006303 0.032719
GO:0050794 regulation of cellular process 12.5% (10/80) 1.31 0.006901 0.033968
GO:0010090 trichome morphogenesis 1.25% (1/80) 7.07 0.007428 0.035643
GO:0019222 regulation of metabolic process 10.0% (8/80) 1.5 0.007331 0.03578
GO:0035091 phosphatidylinositol binding 2.5% (2/80) 3.97 0.007403 0.035824
GO:0008608 attachment of spindle microtubules to kinetochore 1.25% (1/80) 6.77 0.009145 0.040167
GO:0051315 attachment of mitotic spindle microtubules to kinetochore 1.25% (1/80) 6.77 0.009145 0.040167
GO:0090693 plant organ senescence 1.25% (1/80) 6.79 0.009013 0.040206
GO:0010150 leaf senescence 1.25% (1/80) 6.79 0.009013 0.040206
GO:1990752 microtubule end 1.25% (1/80) 6.79 0.009013 0.040206
GO:0035371 microtubule plus-end 1.25% (1/80) 6.79 0.009013 0.040206
GO:0051010 microtubule plus-end binding 1.25% (1/80) 6.79 0.009013 0.040206
GO:0006470 protein dephosphorylation 2.5% (2/80) 3.8 0.009228 0.040223
GO:2000028 regulation of photoperiodism, flowering 1.25% (1/80) 6.85 0.008617 0.04033
GO:0050789 regulation of biological process 12.5% (10/80) 1.24 0.009591 0.040568
GO:0005856 cytoskeleton 2.5% (2/80) 3.86 0.0086 0.040581
GO:0099022 vesicle tethering 1.25% (1/80) 6.7 0.009541 0.040654
GO:0090522 vesicle tethering involved in exocytosis 1.25% (1/80) 6.7 0.009541 0.040654
GO:0051171 regulation of nitrogen compound metabolic process 8.75% (7/80) 1.6 0.008554 0.040704
GO:0004722 protein serine/threonine phosphatase activity 2.5% (2/80) 3.79 0.009425 0.040772
GO:0006997 nucleus organization 1.25% (1/80) 6.67 0.009804 0.041163
GO:0001046 core promoter sequence-specific DNA binding 1.25% (1/80) 6.65 0.009936 0.041412
GO:0080090 regulation of primary metabolic process 8.75% (7/80) 1.58 0.008982 0.041696
GO:0004813 alanine-tRNA ligase activity 1.25% (1/80) 6.55 0.010595 0.043523
GO:0006419 alanyl-tRNA aminoacylation 1.25% (1/80) 6.55 0.010595 0.043523
GO:2000243 positive regulation of reproductive process 1.25% (1/80) 6.5 0.01099 0.044506
GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides 1.25% (1/80) 6.5 0.01099 0.044506
GO:0032991 protein-containing complex 11.25% (9/80) 1.28 0.011666 0.046912
GO:0001006 RNA polymerase III type 3 promoter sequence-specific DNA binding 1.25% (1/80) 6.35 0.012175 0.048614
GO:0008092 cytoskeletal protein binding 3.75% (3/80) 2.65 0.01244 0.049327
GO:0000923 equatorial microtubule organizing center 1.25% (1/80) 6.31 0.012569 0.049497
GO:0015868 purine ribonucleotide transport 1.25% (1/80) 6.29 0.012701 0.049672
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (80) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms