Coexpression cluster: Cluster_704 (Co-expression clusters of Hoang et al 2017 (PRJNA356226))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009892 negative regulation of metabolic process 7.41% (6/81) 3.6 1.1e-05 0.000797
GO:0004663 Rab geranylgeranyltransferase activity 2.47% (2/81) 8.95 8e-06 0.000831
GO:0009890 negative regulation of biosynthetic process 7.41% (6/81) 3.76 6e-06 0.000864
GO:0031324 negative regulation of cellular metabolic process 7.41% (6/81) 3.61 1.1e-05 0.000928
GO:0005968 Rab-protein geranylgeranyltransferase complex 2.47% (2/81) 8.18 2.3e-05 0.001216
GO:0004661 protein geranylgeranyltransferase activity 2.47% (2/81) 8.18 2.3e-05 0.001216
GO:0031327 negative regulation of cellular biosynthetic process 7.41% (6/81) 3.77 6e-06 0.001266
GO:0110165 cellular anatomical entity 37.04% (30/81) 1.07 2.8e-05 0.001317
GO:0008150 biological_process 49.38% (40/81) 0.83 3.2e-05 0.001347
GO:0048519 negative regulation of biological process 7.41% (6/81) 3.21 5.2e-05 0.001383
GO:0008318 protein prenyltransferase activity 2.47% (2/81) 7.54 5.6e-05 0.001415
GO:0050794 regulation of cellular process 17.28% (14/81) 1.78 5.1e-05 0.001443
GO:0009889 regulation of biosynthetic process 13.58% (11/81) 2.1 5e-05 0.001519
GO:0031326 regulation of cellular biosynthetic process 13.58% (11/81) 2.1 4.9e-05 0.001626
GO:0048523 negative regulation of cellular process 7.41% (6/81) 3.23 4.7e-05 0.001673
GO:0018344 protein geranylgeranylation 2.47% (2/81) 7.69 4.6e-05 0.00177
GO:0010558 negative regulation of macromolecule biosynthetic process 6.17% (5/81) 3.54 7.6e-05 0.001798
GO:0097354 prenylation 2.47% (2/81) 7.2 9e-05 0.001827
GO:0018342 protein prenylation 2.47% (2/81) 7.2 9e-05 0.001827
GO:0050789 regulation of biological process 17.28% (14/81) 1.71 8.6e-05 0.001927
GO:0031323 regulation of cellular metabolic process 13.58% (11/81) 1.99 0.0001 0.001939
GO:0005575 cellular_component 41.98% (34/81) 1.07 5e-06 0.002287
GO:0010605 negative regulation of macromolecule metabolic process 6.17% (5/81) 3.37 0.000132 0.002355
GO:0019222 regulation of metabolic process 13.58% (11/81) 1.94 0.000132 0.002446
GO:0009987 cellular process 35.8% (29/81) 0.96 0.000164 0.002796
GO:0065007 biological regulation 17.28% (14/81) 1.6 0.00018 0.002958
GO:0010556 regulation of macromolecule biosynthetic process 12.35% (10/81) 1.99 0.000209 0.003076
GO:0006810 transport 13.58% (11/81) 1.87 0.000202 0.00308
GO:0010468 regulation of gene expression 12.35% (10/81) 2.0 0.000198 0.00313
GO:0051234 establishment of localization 13.58% (11/81) 1.81 0.000296 0.004214
GO:0045271 respiratory chain complex I 2.47% (2/81) 6.29 0.000314 0.00432
GO:0030964 NADH dehydrogenase complex 2.47% (2/81) 6.21 0.000354 0.00473
GO:0010629 negative regulation of gene expression 4.94% (4/81) 3.59 0.000368 0.004758
GO:0051179 localization 13.58% (11/81) 1.75 0.000404 0.005068
GO:0005635 nuclear envelope 2.47% (2/81) 6.06 0.000436 0.005167
GO:0060255 regulation of macromolecule metabolic process 12.35% (10/81) 1.86 0.000428 0.005222
GO:0031332 RNAi effector complex 1.23% (1/81) 10.54 0.000674 0.007571
GO:0016442 RISC complex 1.23% (1/81) 10.54 0.000674 0.007571
GO:0004659 prenyltransferase activity 2.47% (2/81) 5.55 0.000874 0.009573
GO:1902495 transmembrane transporter complex 2.47% (2/81) 5.42 0.001039 0.011094
GO:0098803 respiratory chain complex 2.47% (2/81) 5.4 0.001075 0.011197
GO:0009060 aerobic respiration 2.47% (2/81) 5.38 0.001105 0.011238
GO:0045333 cellular respiration 2.47% (2/81) 5.33 0.001174 0.011654
GO:0006913 nucleocytoplasmic transport 3.7% (3/81) 3.77 0.001454 0.013798
GO:0051169 nuclear transport 3.7% (3/81) 3.77 0.001454 0.013798
GO:1990351 transporter complex 2.47% (2/81) 5.09 0.001638 0.015208
GO:0003674 molecular_function 51.85% (42/81) 0.55 0.001711 0.015543
GO:0015267 channel activity 3.7% (3/81) 3.64 0.001887 0.016446
GO:0022803 passive transmembrane transporter activity 3.7% (3/81) 3.64 0.001887 0.016446
GO:0015030 Cajal body 1.23% (1/81) 8.86 0.002155 0.018399
GO:1902494 catalytic complex 7.41% (6/81) 2.18 0.002209 0.018495
GO:0005488 binding 37.04% (30/81) 0.71 0.00227 0.018637
GO:0008623 CHRAC 1.23% (1/81) 8.69 0.002423 0.019525
GO:0015980 energy derivation by oxidation of organic compounds 2.47% (2/81) 4.76 0.002555 0.020203
GO:0035266 meristem growth 1.23% (1/81) 8.54 0.002692 0.02053
GO:0005515 protein binding 17.28% (14/81) 1.21 0.002654 0.020605
GO:0045272 plasma membrane respiratory chain complex I 1.23% (1/81) 8.33 0.003096 0.02319
GO:0034504 protein localization to nucleus 2.47% (2/81) 4.47 0.003772 0.027297
GO:0006606 protein import into nucleus 2.47% (2/81) 4.47 0.003772 0.027297
GO:0051170 import into nucleus 2.47% (2/81) 4.46 0.003849 0.027391
GO:0032545 CURI complex 1.23% (1/81) 7.9 0.00417 0.02872
GO:0034456 UTP-C complex 1.23% (1/81) 7.9 0.00417 0.02872
GO:0016651 oxidoreductase activity, acting on NAD(P)H 2.47% (2/81) 4.27 0.004981 0.033757
GO:1990204 oxidoreductase complex 2.47% (2/81) 4.2 0.005414 0.035564
GO:0044237 cellular metabolic process 22.22% (18/81) 0.92 0.005366 0.035802
GO:0030619 U1 snRNA binding 1.23% (1/81) 7.37 0.006048 0.039128
GO:0051031 tRNA transport 1.23% (1/81) 7.3 0.006316 0.03966
GO:0006409 tRNA export from nucleus 1.23% (1/81) 7.3 0.006316 0.03966
GO:0030620 U2 snRNA binding 1.23% (1/81) 7.21 0.006718 0.0404
GO:0004425 indole-3-glycerol-phosphate synthase activity 1.23% (1/81) 7.21 0.006718 0.0404
GO:0031047 regulatory ncRNA-mediated gene silencing 2.47% (2/81) 4.05 0.006612 0.040919
GO:1990234 transferase complex 4.94% (4/81) 2.41 0.006989 0.04145
GO:0097064 ncRNA export from nucleus 1.23% (1/81) 7.0 0.007788 0.045556
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (81) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms