Coexpression cluster: Cluster_1566 (Co-expression clusters of Hoang et al 2017 (PRJNA356226))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009987 cellular process 36.36% (32/88) 0.98 5.5e-05 0.004292
GO:0009408 response to heat 3.41% (3/88) 5.25 7.4e-05 0.004332
GO:0006107 oxaloacetate metabolic process 2.27% (2/88) 7.42 6.6e-05 0.004474
GO:0030060 L-malate dehydrogenase activity 2.27% (2/88) 7.65 4.8e-05 0.004521
GO:0051082 unfolded protein binding 4.55% (4/88) 4.93 1e-05 0.004902
GO:0006082 organic acid metabolic process 9.09% (8/88) 2.64 4.7e-05 0.005551
GO:0009266 response to temperature stimulus 3.41% (3/88) 4.96 0.000133 0.006971
GO:0043436 oxoacid metabolic process 9.09% (8/88) 2.64 4.7e-05 0.00736
GO:0019752 carboxylic acid metabolic process 9.09% (8/88) 2.64 4.6e-05 0.010823
GO:0006734 NADH metabolic process 2.27% (2/88) 6.25 0.000332 0.012032
GO:0043648 dicarboxylic acid metabolic process 3.41% (3/88) 4.52 0.000326 0.012779
GO:0008150 biological_process 45.45% (40/88) 0.71 0.000308 0.013204
GO:0097250 mitochondrial respirasome assembly 1.14% (1/88) 11.74 0.000293 0.013794
GO:0009532 plastid stroma 3.41% (3/88) 4.19 0.000636 0.015769
GO:0009570 chloroplast stroma 3.41% (3/88) 4.19 0.000636 0.015769
GO:0031071 cysteine desulfurase activity 1.14% (1/88) 10.15 0.000878 0.015911
GO:0003674 molecular_function 52.27% (46/88) 0.56 0.000848 0.015974
GO:0110165 cellular anatomical entity 31.82% (28/88) 0.85 0.000921 0.016061
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 6.82% (6/88) 2.51 0.0007 0.016475
GO:0016817 hydrolase activity, acting on acid anhydrides 6.82% (6/88) 2.49 0.000735 0.01648
GO:0031386 protein tag activity 2.27% (2/88) 5.57 0.000847 0.016618
GO:0141047 molecular tag activity 2.27% (2/88) 5.57 0.000847 0.016618
GO:0005783 endoplasmic reticulum 4.55% (4/88) 3.3 0.000785 0.016796
GO:0005575 cellular_component 35.23% (31/88) 0.82 0.000624 0.017276
GO:0016615 malate dehydrogenase activity 2.27% (2/88) 5.84 0.00059 0.017354
GO:0016887 ATP hydrolysis activity 5.68% (5/88) 2.9 0.000586 0.018415
GO:0005488 binding 37.5% (33/88) 0.73 0.001107 0.018622
GO:0006108 malate metabolic process 2.27% (2/88) 5.88 0.000556 0.018698
GO:0043933 protein-containing complex organization 5.68% (5/88) 2.66 0.001253 0.019033
GO:0016282 eukaryotic 43S preinitiation complex 1.14% (1/88) 9.57 0.001317 0.019387
GO:0019674 NAD metabolic process 2.27% (2/88) 5.29 0.001239 0.019446
GO:0044281 small molecule metabolic process 9.09% (8/88) 1.94 0.001206 0.019591
GO:0005840 ribosome 3.41% (3/88) 3.78 0.001427 0.019765
GO:0065003 protein-containing complex assembly 4.55% (4/88) 3.07 0.001388 0.01981
GO:0034605 cellular response to heat 2.27% (2/88) 5.08 0.001653 0.022245
GO:0006099 tricarboxylic acid cycle 2.27% (2/88) 4.97 0.001929 0.023911
GO:0043226 organelle 18.18% (16/88) 1.16 0.001901 0.024204
GO:0031625 ubiquitin protein ligase binding 2.27% (2/88) 4.94 0.002008 0.02425
GO:0044389 ubiquitin-like protein ligase binding 2.27% (2/88) 4.9 0.002106 0.024802
GO:0043229 intracellular organelle 18.18% (16/88) 1.16 0.001899 0.024851
GO:0017111 ribonucleoside triphosphate phosphatase activity 5.68% (5/88) 2.36 0.002999 0.025679
GO:0043687 post-translational protein modification 5.68% (5/88) 2.37 0.002945 0.025688
GO:0008152 metabolic process 28.41% (25/88) 0.82 0.00242 0.025908
GO:0045911 positive regulation of DNA recombination 1.14% (1/88) 8.42 0.002925 0.025992
GO:0000019 regulation of mitotic recombination 1.14% (1/88) 8.42 0.002925 0.025992
GO:0045951 positive regulation of mitotic recombination 1.14% (1/88) 8.42 0.002925 0.025992
GO:0070993 translation preinitiation complex 1.14% (1/88) 8.42 0.002925 0.025992
GO:0006457 protein folding 3.41% (3/88) 3.52 0.002383 0.026099
GO:0042788 polysomal ribosome 1.14% (1/88) 8.74 0.00234 0.026247
GO:0016782 transferase activity, transferring sulphur-containing groups 2.27% (2/88) 4.84 0.0023 0.026427
GO:0044237 cellular metabolic process 22.73% (20/88) 0.95 0.002625 0.026881
GO:0071704 organic substance metabolic process 27.27% (24/88) 0.84 0.002755 0.027031
GO:0009628 response to abiotic stimulus 3.41% (3/88) 3.47 0.002619 0.027408
GO:0044238 primary metabolic process 26.14% (23/88) 0.86 0.00275 0.027557
GO:0003824 catalytic activity 30.68% (27/88) 0.76 0.002902 0.027897
GO:0033567 DNA replication, Okazaki fragment processing 1.14% (1/88) 8.21 0.003363 0.028283
GO:0004753 saccharopine dehydrogenase activity 1.14% (1/88) 8.15 0.003509 0.028993
GO:0006434 seryl-tRNA aminoacylation 1.14% (1/88) 7.93 0.004092 0.031598
GO:0004828 serine-tRNA ligase activity 1.14% (1/88) 7.93 0.004092 0.031598
GO:0016462 pyrophosphatase activity 5.68% (5/88) 2.27 0.003988 0.031836
GO:0010484 histone H3 acetyltransferase activity 1.14% (1/88) 7.98 0.003946 0.032048
GO:0006520 amino acid metabolic process 4.55% (4/88) 2.56 0.004931 0.037461
GO:0001727 lipid kinase activity 2.27% (2/88) 4.22 0.005278 0.038843
GO:0043966 histone H3 acetylation 1.14% (1/88) 7.57 0.005258 0.039313
GO:1901605 alpha-amino acid metabolic process 3.41% (3/88) 3.06 0.005818 0.039711
GO:0008289 lipid binding 3.41% (3/88) 3.06 0.005759 0.039892
GO:0005515 protein binding 15.91% (14/88) 1.09 0.005733 0.040305
GO:0022607 cellular component assembly 4.55% (4/88) 2.5 0.005712 0.040765
GO:1901564 organonitrogen compound metabolic process 17.05% (15/88) 1.04 0.005699 0.041294
GO:0030690 Noc1p-Noc2p complex 1.14% (1/88) 7.25 0.006569 0.043576
GO:0030691 Noc2p-Noc3p complex 1.14% (1/88) 7.25 0.006569 0.043576
GO:0140662 ATP-dependent protein folding chaperone 2.27% (2/88) 4.02 0.006931 0.044113
GO:0030170 pyridoxal phosphate binding 2.27% (2/88) 4.02 0.006883 0.044412
GO:0070279 vitamin B6 binding 2.27% (2/88) 4.02 0.006883 0.044412
GO:1990904 ribonucleoprotein complex 4.55% (4/88) 2.4 0.00716 0.044968
GO:0005737 cytoplasm 9.09% (8/88) 1.5 0.00759 0.046427
GO:0019878 lysine biosynthetic process via aminoadipic acid 1.14% (1/88) 7.04 0.007587 0.047018
GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity 1.14% (1/88) 6.93 0.008168 0.047496
GO:0004351 glutamate decarboxylase activity 1.14% (1/88) 6.98 0.007877 0.047568
GO:0043621 protein self-association 1.14% (1/88) 6.9 0.008313 0.047751
GO:0070647 protein modification by small protein conjugation or removal 4.55% (4/88) 2.35 0.008161 0.048048
GO:0006807 nitrogen compound metabolic process 21.59% (19/88) 0.84 0.008093 0.048252
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (88) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms