Coexpression cluster: Cluster_514 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0010025 wax biosynthetic process 4.71% (4/85) 9.2 0.0 0.0
GO:0010166 wax metabolic process 4.71% (4/85) 9.2 0.0 0.0
GO:1901570 fatty acid derivative biosynthetic process 4.71% (4/85) 8.25 0.0 0.0
GO:0005457 GDP-fucose transmembrane transporter activity 3.53% (3/85) 9.12 0.0 1e-06
GO:0036080 purine nucleotide-sugar transmembrane transporter activity 3.53% (3/85) 9.12 0.0 1e-06
GO:1901568 fatty acid derivative metabolic process 4.71% (4/85) 7.02 0.0 1e-06
GO:0010143 cutin biosynthetic process 4.71% (4/85) 7.03 0.0 1e-06
GO:0004467 long-chain fatty acid-CoA ligase activity 4.71% (4/85) 7.21 0.0 1e-06
GO:0015645 fatty acid ligase activity 4.71% (4/85) 6.7 0.0 1e-06
GO:0031331 positive regulation of cellular catabolic process 4.71% (4/85) 6.72 0.0 1e-06
GO:0061014 positive regulation of mRNA catabolic process 4.71% (4/85) 6.72 0.0 1e-06
GO:0061157 mRNA destabilization 4.71% (4/85) 6.76 0.0 1e-06
GO:0050779 RNA destabilization 4.71% (4/85) 6.76 0.0 1e-06
GO:0043488 regulation of mRNA stability 4.71% (4/85) 6.57 0.0 2e-06
GO:0061013 regulation of mRNA catabolic process 4.71% (4/85) 6.54 0.0 2e-06
GO:0043487 regulation of RNA stability 4.71% (4/85) 6.42 0.0 2e-06
GO:0016878 acid-thiol ligase activity 4.71% (4/85) 6.4 0.0 2e-06
GO:1903313 positive regulation of mRNA metabolic process 4.71% (4/85) 6.31 0.0 3e-06
GO:0016405 CoA-ligase activity 4.71% (4/85) 5.73 1e-06 1.3e-05
GO:0017022 myosin binding 3.53% (3/85) 7.17 1e-06 1.4e-05
GO:1903311 regulation of mRNA metabolic process 4.71% (4/85) 5.67 1e-06 1.5e-05
GO:0031329 regulation of cellular catabolic process 4.71% (4/85) 5.5 2e-06 2.1e-05
GO:0005783 endoplasmic reticulum 7.06% (6/85) 3.93 3e-06 2.9e-05
GO:0009896 positive regulation of catabolic process 4.71% (4/85) 5.34 3e-06 3e-05
GO:0016877 ligase activity, forming carbon-sulfur bonds 4.71% (4/85) 5.02 8e-06 6.8e-05
GO:0005338 nucleotide-sugar transmembrane transporter activity 3.53% (3/85) 6.26 9e-06 7.5e-05
GO:0006629 lipid metabolic process 10.59% (9/85) 2.65 1.5e-05 0.000116
GO:0005384 manganese ion transmembrane transporter activity 3.53% (3/85) 6.0 1.6e-05 0.00012
GO:0003714 transcription corepressor activity 3.53% (3/85) 5.94 1.8e-05 0.000131
GO:0009894 regulation of catabolic process 4.71% (4/85) 4.61 2.5e-05 0.000174
GO:1990745 EARP complex 2.35% (2/85) 7.98 3e-05 0.000208
GO:0008610 lipid biosynthetic process 7.06% (6/85) 3.06 9e-05 0.000599
GO:1901505 carbohydrate derivative transmembrane transporter activity 3.53% (3/85) 5.14 9.3e-05 0.000603
GO:0015932 nucleobase-containing compound transmembrane transporter activity 3.53% (3/85) 5.03 0.000117 0.000733
GO:0010608 post-transcriptional regulation of gene expression 4.71% (4/85) 4.01 0.000123 0.000746
GO:0032456 endocytic recycling 2.35% (2/85) 6.9 0.000135 0.000799
GO:0046915 transition metal ion transmembrane transporter activity 3.53% (3/85) 4.94 0.000141 0.000809
GO:0000938 GARP complex 2.35% (2/85) 6.78 0.000161 0.000904
GO:0008092 cytoskeletal protein binding 5.88% (5/85) 3.3 0.000167 0.000915
GO:0007041 lysosomal transport 2.35% (2/85) 6.7 0.000179 0.000955
GO:0110165 cellular anatomical entity 34.12% (29/85) 0.95 0.000203 0.001054
GO:0051254 positive regulation of RNA metabolic process 4.71% (4/85) 3.65 0.00031 0.001571
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 4.71% (4/85) 3.57 0.000381 0.001886
GO:0065008 regulation of biological quality 4.71% (4/85) 3.56 0.000393 0.001902
GO:0031325 positive regulation of cellular metabolic process 4.71% (4/85) 3.3 0.000767 0.00363
GO:0042147 retrograde transport, endosome to Golgi 2.35% (2/85) 5.53 0.000891 0.004128
GO:0007030 Golgi organization 2.35% (2/85) 5.5 0.000938 0.004252
GO:0003712 transcription coregulator activity 3.53% (3/85) 3.85 0.001238 0.005169
GO:0051173 positive regulation of nitrogen compound metabolic process 4.71% (4/85) 3.1 0.001274 0.005217
GO:0048522 positive regulation of cellular process 4.71% (4/85) 3.13 0.001202 0.005223
GO:0008374 O-acyltransferase activity 3.53% (3/85) 3.85 0.001233 0.005252
GO:0016482 cytosolic transport 2.35% (2/85) 5.32 0.001189 0.005278
GO:0009893 positive regulation of metabolic process 4.71% (4/85) 3.08 0.00134 0.005285
GO:0098876 vesicle-mediated transport to the plasma membrane 2.35% (2/85) 5.22 0.001368 0.005298
GO:0010604 positive regulation of macromolecule metabolic process 4.71% (4/85) 3.09 0.001337 0.005373
GO:0003729 mRNA binding 4.71% (4/85) 3.06 0.001413 0.005374
GO:0005575 cellular_component 34.12% (29/85) 0.77 0.001624 0.005964
GO:0015297 antiporter activity 3.53% (3/85) 3.72 0.001621 0.006057
GO:0048518 positive regulation of biological process 4.71% (4/85) 2.87 0.002315 0.008218
GO:0043231 intracellular membrane-bounded organelle 16.47% (14/85) 1.23 0.00231 0.008339
GO:0043227 membrane-bounded organelle 16.47% (14/85) 1.22 0.002474 0.008501
GO:0016874 ligase activity 4.71% (4/85) 2.84 0.002451 0.008557
GO:0015291 secondary active transmembrane transporter activity 3.53% (3/85) 3.35 0.00328 0.011089
GO:0007034 vacuolar transport 2.35% (2/85) 4.27 0.004934 0.016422
GO:0046873 metal ion transmembrane transporter activity 3.53% (3/85) 3.08 0.005535 0.018139
GO:0005794 Golgi apparatus 3.53% (3/85) 3.07 0.005682 0.018339
GO:0005737 cytoplasm 9.41% (8/85) 1.55 0.006181 0.019651
GO:0016197 endosomal transport 2.35% (2/85) 4.0 0.007086 0.022197
GO:0022857 transmembrane transporter activity 8.24% (7/85) 1.63 0.007631 0.023558
GO:0043226 organelle 16.47% (14/85) 1.01 0.0087 0.0261
GO:0043229 intracellular organelle 16.47% (14/85) 1.01 0.008693 0.026451
GO:0016297 acyl-[acyl-carrier-protein] hydrolase activity 1.18% (1/85) 6.66 0.009854 0.028751
GO:0005215 transporter activity 8.24% (7/85) 1.56 0.009766 0.028892
GO:0006812 monoatomic cation transport 3.53% (3/85) 2.68 0.011822 0.034028
GO:0051192 prosthetic group binding 1.18% (1/85) 6.31 0.012512 0.034167
GO:0044620 ACP phosphopantetheine attachment site binding 1.18% (1/85) 6.31 0.012512 0.034167
GO:0140414 phosphopantetheine-dependent carrier activity 1.18% (1/85) 6.31 0.012512 0.034167
GO:0000036 acyl carrier activity 1.18% (1/85) 6.31 0.012512 0.034167
GO:0016020 membrane 12.94% (11/85) 1.1 0.012961 0.034946
GO:0099023 vesicle tethering complex 2.35% (2/85) 3.53 0.013315 0.035014
GO:0022890 inorganic cation transmembrane transporter activity 3.53% (3/85) 2.62 0.013189 0.035114
GO:0051668 localization within membrane 2.35% (2/85) 3.45 0.014633 0.03801
GO:0003779 actin binding 2.35% (2/85) 3.44 0.014933 0.038322
GO:0008324 monoatomic cation transmembrane transporter activity 3.53% (3/85) 2.48 0.017144 0.042961
GO:0006811 monoatomic ion transport 3.53% (3/85) 2.48 0.016945 0.042967
GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity 1.18% (1/85) 5.79 0.017945 0.044446
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups 3.53% (3/85) 2.4 0.019718 0.048275
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (85) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms