Coexpression cluster: Cluster_2988 (Co-expression clusters of Hoang et al 2017 (PRJNA356226))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0000987 cis-regulatory region sequence-specific DNA binding 50.0% (1/2) 7.75 0.004644 0.025542
GO:0009893 positive regulation of metabolic process 50.0% (1/2) 6.49 0.011065 0.025819
GO:1990837 sequence-specific double-stranded DNA binding 50.0% (1/2) 6.67 0.00982 0.026075
GO:0008289 lipid binding 50.0% (1/2) 6.94 0.008147 0.026139
GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding 50.0% (1/2) 7.52 0.005441 0.026184
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific 50.0% (1/2) 7.61 0.005119 0.026277
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 50.0% (1/2) 6.98 0.007882 0.026388
GO:0010604 positive regulation of macromolecule metabolic process 50.0% (1/2) 6.49 0.011059 0.02661
GO:1902680 positive regulation of RNA biosynthetic process 50.0% (1/2) 7.32 0.00626 0.026781
GO:0045893 positive regulation of DNA-templated transcription 50.0% (1/2) 7.32 0.00626 0.026781
GO:0009891 positive regulation of biosynthetic process 50.0% (1/2) 7.02 0.007667 0.026833
GO:0010557 positive regulation of macromolecule biosynthetic process 50.0% (1/2) 7.02 0.007667 0.026833
GO:0031328 positive regulation of cellular biosynthetic process 50.0% (1/2) 7.02 0.007667 0.026833
GO:0046983 protein dimerization activity 50.0% (1/2) 6.67 0.009811 0.026979
GO:0000976 transcription cis-regulatory region binding 50.0% (1/2) 6.77 0.009112 0.026985
GO:0001067 transcription regulatory region nucleic acid binding 50.0% (1/2) 6.77 0.009112 0.026985
GO:0051173 positive regulation of nitrogen compound metabolic process 50.0% (1/2) 6.51 0.010913 0.027107
GO:0031325 positive regulation of cellular metabolic process 50.0% (1/2) 6.71 0.009509 0.027119
GO:0005543 phospholipid binding 50.0% (1/2) 7.75 0.004627 0.027409
GO:0048522 positive regulation of cellular process 50.0% (1/2) 6.54 0.010741 0.027568
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding 50.0% (1/2) 7.84 0.004362 0.027988
GO:0045944 positive regulation of transcription by RNA polymerase II 50.0% (1/2) 8.1 0.003641 0.028036
GO:0099023 vesicle tethering complex 50.0% (1/2) 7.93 0.004083 0.02858
GO:0140352 export from cell 50.0% (1/2) 8.22 0.003355 0.028706
GO:0006357 regulation of transcription by RNA polymerase II 50.0% (1/2) 6.24 0.013215 0.029074
GO:0048518 positive regulation of biological process 50.0% (1/2) 6.28 0.012865 0.029136
GO:0051254 positive regulation of RNA metabolic process 50.0% (1/2) 7.06 0.007461 0.030237
GO:0035091 phosphatidylinositol binding 50.0% (1/2) 8.29 0.003189 0.030696
GO:0003690 double-stranded DNA binding 50.0% (1/2) 6.09 0.01464 0.031313
GO:0046903 secretion 50.0% (1/2) 8.39 0.00297 0.032668
GO:0016192 vesicle-mediated transport 50.0% (1/2) 5.93 0.016314 0.033951
GO:0032940 secretion by cell 50.0% (1/2) 8.45 0.00286 0.036706
GO:0006887 exocytosis 50.0% (1/2) 8.69 0.002428 0.037393
GO:0043565 sequence-specific DNA binding 50.0% (1/2) 5.63 0.02009 0.040709
GO:1901981 phosphatidylinositol phosphate binding 50.0% (1/2) 8.72 0.002368 0.045589
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms