Coexpression cluster: Cluster_1348 (Co-expression clusters of Hoang et al 2017 (PRJNA356226))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016841 ammonia-lyase activity 8.57% (6/70) 8.42 0.0 0.0
GO:0016840 carbon-nitrogen lyase activity 8.57% (6/70) 7.29 0.0 0.0
GO:0004478 methionine adenosyltransferase activity 5.71% (4/70) 9.82 0.0 0.0
GO:0006556 S-adenosylmethionine biosynthetic process 5.71% (4/70) 9.58 0.0 0.0
GO:0046500 S-adenosylmethionine metabolic process 5.71% (4/70) 9.23 0.0 0.0
GO:0005464 UDP-xylose transmembrane transporter activity 4.29% (3/70) 9.4 0.0 1e-06
GO:0044272 sulfur compound biosynthetic process 7.14% (5/70) 5.44 0.0 6e-06
GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity 4.29% (3/70) 8.1 0.0 7e-06
GO:0042285 xylosyltransferase activity 4.29% (3/70) 7.65 1e-06 1.7e-05
GO:0010417 glucuronoxylan biosynthetic process 4.29% (3/70) 7.47 1e-06 1.8e-05
GO:0010413 glucuronoxylan metabolic process 4.29% (3/70) 7.47 1e-06 1.8e-05
GO:0070592 cell wall polysaccharide biosynthetic process 5.71% (4/70) 5.93 1e-06 2e-05
GO:0000271 polysaccharide biosynthetic process 7.14% (5/70) 4.7 2e-06 3.7e-05
GO:0016829 lyase activity 8.57% (6/70) 4.03 2e-06 4.4e-05
GO:0015020 glucuronosyltransferase activity 4.29% (3/70) 6.89 2e-06 4.6e-05
GO:0010383 cell wall polysaccharide metabolic process 5.71% (4/70) 5.47 2e-06 4.6e-05
GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity 4.29% (3/70) 6.85 3e-06 4.7e-05
GO:0044036 cell wall macromolecule metabolic process 5.71% (4/70) 5.23 5e-06 7.4e-05
GO:0005338 nucleotide-sugar transmembrane transporter activity 4.29% (3/70) 6.54 5e-06 7.6e-05
GO:0045492 xylan biosynthetic process 4.29% (3/70) 6.51 6e-06 7.8e-05
GO:0006790 sulfur compound metabolic process 7.14% (5/70) 4.36 5e-06 7.8e-05
GO:0009834 plant-type secondary cell wall biogenesis 4.29% (3/70) 6.44 6e-06 8.5e-05
GO:0044249 cellular biosynthetic process 15.71% (11/70) 2.38 8e-06 0.0001
GO:0016051 carbohydrate biosynthetic process 7.14% (5/70) 4.22 8e-06 0.000101
GO:0005976 polysaccharide metabolic process 7.14% (5/70) 4.11 1.2e-05 0.000137
GO:0005794 Golgi apparatus 7.14% (5/70) 4.09 1.3e-05 0.000144
GO:0003824 catalytic activity 40.0% (28/70) 1.14 1.5e-05 0.000166
GO:0045491 xylan metabolic process 4.29% (3/70) 5.85 2.2e-05 0.000229
GO:0016763 pentosyltransferase activity 4.29% (3/70) 5.79 2.4e-05 0.000248
GO:0009058 biosynthetic process 15.71% (11/70) 2.19 2.7e-05 0.000267
GO:1901505 carbohydrate derivative transmembrane transporter activity 4.29% (3/70) 5.42 5.2e-05 0.000498
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups 5.71% (4/70) 4.25 6.3e-05 0.000582
GO:0015932 nucleobase-containing compound transmembrane transporter activity 4.29% (3/70) 5.31 6.6e-05 0.000587
GO:0010410 hemicellulose metabolic process 4.29% (3/70) 5.25 7.3e-05 0.000634
GO:1901576 organic substance biosynthetic process 14.29% (10/70) 2.12 9.4e-05 0.000788
GO:1902222 erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process 2.86% (2/70) 6.99 0.00012 0.000955
GO:0006559 L-phenylalanine catabolic process 2.86% (2/70) 6.99 0.00012 0.000955
GO:0000139 Golgi membrane 4.29% (3/70) 4.92 0.000144 0.001117
GO:0046658 obsolete anchored component of plasma membrane 4.29% (3/70) 4.85 0.000165 0.001249
GO:0006558 L-phenylalanine metabolic process 2.86% (2/70) 6.66 0.00019 0.001365
GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process 2.86% (2/70) 6.66 0.00019 0.001365
GO:0009832 plant-type cell wall biogenesis 4.29% (3/70) 4.66 0.000243 0.001707
GO:0070001 aspartic-type peptidase activity 4.29% (3/70) 4.61 0.000268 0.001794
GO:0004190 aspartic-type endopeptidase activity 4.29% (3/70) 4.61 0.000268 0.001794
GO:0071669 plant-type cell wall organization or biogenesis 4.29% (3/70) 4.45 0.000371 0.002433
GO:0042546 cell wall biogenesis 4.29% (3/70) 4.42 0.000394 0.00253
GO:0008514 organic anion transmembrane transporter activity 4.29% (3/70) 4.21 0.00061 0.003827
GO:0009074 aromatic amino acid family catabolic process 2.86% (2/70) 5.59 0.000828 0.004882
GO:0006083 acetate metabolic process 1.43% (1/70) 10.26 0.000815 0.004907
GO:0019427 acetyl-CoA biosynthetic process from acetate 1.43% (1/70) 10.26 0.000815 0.004907
GO:0015297 antiporter activity 4.29% (3/70) 4.0 0.000926 0.005354
GO:0016208 AMP binding 1.43% (1/70) 9.75 0.001164 0.006605
GO:0008194 UDP-glycosyltransferase activity 5.71% (4/70) 3.09 0.001305 0.007262
GO:0071554 cell wall organization or biogenesis 4.29% (3/70) 3.81 0.001342 0.007332
GO:0044085 cellular component biogenesis 4.29% (3/70) 3.79 0.001401 0.007515
GO:0007010 cytoskeleton organization 4.29% (3/70) 3.65 0.001838 0.00951
GO:0015291 secondary active transmembrane transporter activity 4.29% (3/70) 3.64 0.001889 0.009606
GO:0016405 CoA-ligase activity 2.86% (2/70) 5.01 0.001829 0.009633
GO:0009059 macromolecule biosynthetic process 7.14% (5/70) 2.5 0.001967 0.009833
GO:0016758 hexosyltransferase activity 5.71% (4/70) 2.87 0.002241 0.011016
GO:0016740 transferase activity 18.57% (13/70) 1.26 0.002588 0.012517
GO:0016413 O-acetyltransferase activity 2.86% (2/70) 4.73 0.002663 0.01267
GO:0005829 cytosol 7.14% (5/70) 2.33 0.003238 0.015163
GO:1901606 alpha-amino acid catabolic process 2.86% (2/70) 4.47 0.003804 0.016749
GO:0003987 acetate-CoA ligase activity 1.43% (1/70) 8.07 0.003721 0.016887
GO:0004765 shikimate kinase activity 1.43% (1/70) 8.07 0.003721 0.016887
GO:0009072 aromatic amino acid metabolic process 2.86% (2/70) 4.47 0.003794 0.01696
GO:0005975 carbohydrate metabolic process 7.14% (5/70) 2.26 0.004039 0.017521
GO:0030243 cellulose metabolic process 2.86% (2/70) 4.38 0.004243 0.017631
GO:0009063 amino acid catabolic process 2.86% (2/70) 4.37 0.004344 0.017798
GO:0030244 cellulose biosynthetic process 2.86% (2/70) 4.39 0.004233 0.01784
GO:0003674 molecular_function 51.43% (36/70) 0.54 0.004211 0.018002
GO:0071840 cellular component organization or biogenesis 10.0% (7/70) 1.76 0.004594 0.018564
GO:0016877 ligase activity, forming carbon-sulfur bonds 2.86% (2/70) 4.3 0.004726 0.01884
GO:0042995 cell projection 1.43% (1/70) 7.51 0.00546 0.021478
GO:0051273 beta-glucan metabolic process 2.86% (2/70) 4.05 0.006623 0.025372
GO:0051274 beta-glucan biosynthetic process 2.86% (2/70) 4.05 0.00661 0.025658
GO:0008360 regulation of cell shape 1.43% (1/70) 6.96 0.008006 0.028803
GO:0052324 plant-type cell wall cellulose biosynthetic process 1.43% (1/70) 6.96 0.008006 0.028803
GO:0052541 plant-type cell wall cellulose metabolic process 1.43% (1/70) 6.96 0.008006 0.028803
GO:0034406 cell wall beta-glucan metabolic process 1.43% (1/70) 6.96 0.008006 0.028803
GO:0034410 cell wall beta-glucan biosynthetic process 1.43% (1/70) 6.96 0.008006 0.028803
GO:0008092 cytoskeletal protein binding 4.29% (3/70) 2.84 0.00866 0.030779
GO:0032440 2-alkenal reductase [NAD(P)+] activity 1.43% (1/70) 6.76 0.009161 0.032174
GO:0004175 endopeptidase activity 4.29% (3/70) 2.79 0.009554 0.033157
GO:0016757 glycosyltransferase activity 5.71% (4/70) 2.26 0.009896 0.033947
GO:0016407 acetyltransferase activity 2.86% (2/70) 3.74 0.010066 0.034132
GO:0010215 cellulose microfibril organization 1.43% (1/70) 6.61 0.0102 0.034192
GO:0009250 glucan biosynthetic process 2.86% (2/70) 3.69 0.0107 0.035465
GO:0098588 bounding membrane of organelle 4.29% (3/70) 2.66 0.012219 0.040052
GO:0030198 extracellular matrix organization 1.43% (1/70) 6.26 0.012964 0.041121
GO:0043062 extracellular structure organization 1.43% (1/70) 6.26 0.012964 0.041121
GO:0008374 O-acyltransferase activity 2.86% (2/70) 3.55 0.01287 0.04172
GO:0022604 regulation of cell morphogenesis 1.43% (1/70) 6.15 0.013998 0.04393
GO:0007163 establishment or maintenance of cell polarity 1.43% (1/70) 6.07 0.014802 0.045964
GO:0016054 organic acid catabolic process 2.86% (2/70) 3.42 0.015286 0.046487
GO:0046395 carboxylic acid catabolic process 2.86% (2/70) 3.42 0.015286 0.046487
GO:0110165 cellular anatomical entity 28.57% (20/70) 0.69 0.016594 0.049951
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (70) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms