Coexpression cluster: Cluster_8782 (Co-expression clusters of Hoang et al 2017 (PRJNA356226))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005674 transcription factor TFIIF complex 50.0% (1/2) 13.11 0.000113 0.005205
GO:0140223 general transcription initiation factor activity 50.0% (1/2) 9.74 0.001168 0.008265
GO:0001096 TFIIF-class transcription factor complex binding 50.0% (1/2) 13.44 9e-05 0.008267
GO:0032784 regulation of DNA-templated transcription elongation 50.0% (1/2) 9.48 0.001404 0.008611
GO:0001098 basal transcription machinery binding 50.0% (1/2) 9.89 0.001051 0.008794
GO:0001099 basal RNA polymerase II transcription machinery binding 50.0% (1/2) 9.89 0.001051 0.008794
GO:0032786 positive regulation of DNA-templated transcription, elongation 50.0% (1/2) 9.77 0.001148 0.0088
GO:0008134 transcription factor binding 50.0% (1/2) 9.52 0.001361 0.008942
GO:0090304 nucleic acid metabolic process 100.0% (2/2) 4.65 0.001597 0.009185
GO:0016251 RNA polymerase II general transcription initiation factor activity 50.0% (1/2) 9.99 0.000985 0.010068
GO:0140296 general transcription initiation factor binding 50.0% (1/2) 10.07 0.000932 0.010714
GO:0006139 nucleobase-containing compound metabolic process 100.0% (2/2) 4.41 0.002208 0.011284
GO:0034641 cellular nitrogen compound metabolic process 100.0% (2/2) 4.23 0.002857 0.011427
GO:0034243 regulation of transcription elongation by RNA polymerase II 50.0% (1/2) 10.38 0.000749 0.01148
GO:0006352 DNA-templated transcription initiation 50.0% (1/2) 8.85 0.002162 0.011701
GO:1901360 organic cyclic compound metabolic process 100.0% (2/2) 4.24 0.002811 0.011755
GO:0090575 RNA polymerase II transcription regulator complex 50.0% (1/2) 8.54 0.002691 0.011788
GO:0001091 RNA polymerase II general transcription initiation factor binding 50.0% (1/2) 11.34 0.000386 0.011838
GO:0006367 transcription initiation at RNA polymerase II promoter 50.0% (1/2) 10.08 0.000922 0.012114
GO:0006725 cellular aromatic compound metabolic process 100.0% (2/2) 4.28 0.002653 0.012204
GO:0046483 heterocycle metabolic process 100.0% (2/2) 4.31 0.002534 0.012269
GO:0032968 positive regulation of transcription elongation by RNA polymerase II 50.0% (1/2) 10.44 0.000722 0.013286
GO:0016070 RNA metabolic process 100.0% (2/2) 5.36 0.000589 0.013544
GO:0045944 positive regulation of transcription by RNA polymerase II 50.0% (1/2) 8.1 0.003641 0.013957
GO:0003676 nucleic acid binding 100.0% (2/2) 3.93 0.004321 0.015902
GO:0043227 membrane-bounded organelle 100.0% (2/2) 3.82 0.004993 0.017015
GO:0043231 intracellular membrane-bounded organelle 100.0% (2/2) 3.83 0.004919 0.017406
GO:0005515 protein binding 100.0% (2/2) 3.74 0.00561 0.017797
GO:0005667 transcription regulator complex 50.0% (1/2) 7.52 0.005457 0.017931
GO:0043226 organelle 100.0% (2/2) 3.62 0.006651 0.018542
GO:0045893 positive regulation of DNA-templated transcription 50.0% (1/2) 7.32 0.00626 0.018579
GO:1902680 positive regulation of RNA biosynthetic process 50.0% (1/2) 7.32 0.00626 0.018579
GO:0009891 positive regulation of biosynthetic process 50.0% (1/2) 7.02 0.007667 0.019063
GO:0031328 positive regulation of cellular biosynthetic process 50.0% (1/2) 7.02 0.007667 0.019063
GO:0010557 positive regulation of macromolecule biosynthetic process 50.0% (1/2) 7.02 0.007667 0.019063
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 50.0% (1/2) 6.98 0.007882 0.019083
GO:0043229 intracellular organelle 100.0% (2/2) 3.62 0.00665 0.019118
GO:0051254 positive regulation of RNA metabolic process 50.0% (1/2) 7.06 0.007461 0.020189
GO:0032774 RNA biosynthetic process 50.0% (1/2) 6.76 0.009188 0.021674
GO:0031325 positive regulation of cellular metabolic process 50.0% (1/2) 6.71 0.009509 0.021871
GO:0009893 positive regulation of metabolic process 50.0% (1/2) 6.49 0.011065 0.023137
GO:0010604 positive regulation of macromolecule metabolic process 50.0% (1/2) 6.49 0.011059 0.023661
GO:0051173 positive regulation of nitrogen compound metabolic process 50.0% (1/2) 6.51 0.010913 0.023905
GO:0048522 positive regulation of cellular process 50.0% (1/2) 6.54 0.010741 0.024102
GO:0043170 macromolecule metabolic process 100.0% (2/2) 3.2 0.011854 0.024235
GO:0009451 RNA modification 50.0% (1/2) 6.34 0.01229 0.024579
GO:0048518 positive regulation of biological process 50.0% (1/2) 6.28 0.012865 0.025183
GO:0006357 regulation of transcription by RNA polymerase II 50.0% (1/2) 6.24 0.013215 0.02533
GO:0044237 cellular metabolic process 100.0% (2/2) 3.09 0.01375 0.025817
GO:0044877 protein-containing complex binding 50.0% (1/2) 6.09 0.014607 0.02635
GO:0006807 nitrogen compound metabolic process 100.0% (2/2) 3.05 0.014562 0.026794
GO:0034654 nucleobase-containing compound biosynthetic process 50.0% (1/2) 5.87 0.017053 0.030172
GO:0044238 primary metabolic process 100.0% (2/2) 2.8 0.020711 0.035285
GO:0097159 organic cyclic compound binding 100.0% (2/2) 2.8 0.020611 0.035777
GO:0018130 heterocycle biosynthetic process 50.0% (1/2) 5.51 0.021868 0.03658
GO:0071704 organic substance metabolic process 100.0% (2/2) 2.71 0.023373 0.037726
GO:0019438 aromatic compound biosynthetic process 50.0% (1/2) 5.43 0.022991 0.03777
GO:0008152 metabolic process 100.0% (2/2) 2.64 0.025737 0.039463
GO:1901362 organic cyclic compound biosynthetic process 50.0% (1/2) 5.29 0.025476 0.039725
GO:0009059 macromolecule biosynthetic process 50.0% (1/2) 5.31 0.025098 0.039811
GO:0140513 nuclear protein-containing complex 50.0% (1/2) 5.07 0.029605 0.04465
GO:0044271 cellular nitrogen compound biosynthetic process 50.0% (1/2) 5.04 0.030182 0.044786
GO:0110165 cellular anatomical entity 100.0% (2/2) 2.5 0.031232 0.045608
GO:0009987 cellular process 100.0% (2/2) 2.44 0.033939 0.048788
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms