Coexpression cluster: Cluster_3063 (Co-expression clusters of Hoang et al 2017 (PRJNA356226))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005375 copper ion transmembrane transporter activity 33.33% (1/3) 11.22 0.000419 0.015374
GO:0055070 copper ion homeostasis 33.33% (1/3) 11.52 0.000339 0.018669
GO:0098771 inorganic ion homeostasis 33.33% (1/3) 7.89 0.004203 0.03302
GO:0051253 negative regulation of RNA metabolic process 33.33% (1/3) 8.08 0.003685 0.033777
GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity 33.33% (1/3) 7.89 0.004198 0.035518
GO:0043682 P-type divalent copper transporter activity 33.33% (1/3) 11.59 0.000324 0.035691
GO:0045934 negative regulation of nucleobase-containing compound metabolic process 33.33% (1/3) 7.67 0.004899 0.035929
GO:0005507 copper ion binding 33.33% (1/3) 8.11 0.003605 0.036051
GO:0000122 negative regulation of transcription by RNA polymerase II 33.33% (1/3) 9.22 0.001671 0.036772
GO:0045944 positive regulation of transcription by RNA polymerase II 33.33% (1/3) 7.52 0.005457 0.037514
GO:0046915 transition metal ion transmembrane transporter activity 33.33% (1/3) 8.18 0.003456 0.038012
GO:1901682 sulfur compound transmembrane transporter activity 33.33% (1/3) 9.48 0.001397 0.038422
GO:1902679 negative regulation of RNA biosynthetic process 33.33% (1/3) 8.29 0.003192 0.039009
GO:0045892 negative regulation of DNA-templated transcription 33.33% (1/3) 8.29 0.003192 0.039009
GO:0005667 transcription regulator complex 33.33% (1/3) 6.93 0.008175 0.042821
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 33.33% (1/3) 6.4 0.0118 0.043266
GO:0009892 negative regulation of metabolic process 33.33% (1/3) 5.77 0.01817 0.043451
GO:0031328 positive regulation of cellular biosynthetic process 33.33% (1/3) 6.44 0.011478 0.043537
GO:0009891 positive regulation of biosynthetic process 33.33% (1/3) 6.44 0.011478 0.043537
GO:0010557 positive regulation of macromolecule biosynthetic process 33.33% (1/3) 6.44 0.011478 0.043537
GO:0048518 positive regulation of biological process 33.33% (1/3) 5.69 0.019235 0.044081
GO:0051172 negative regulation of nitrogen compound metabolic process 33.33% (1/3) 6.96 0.008026 0.044143
GO:0046873 metal ion transmembrane transporter activity 33.33% (1/3) 6.32 0.012449 0.044173
GO:0031324 negative regulation of cellular metabolic process 33.33% (1/3) 5.78 0.018072 0.044176
GO:0055080 monoatomic cation homeostasis 33.33% (1/3) 7.19 0.006839 0.044251
GO:0008324 monoatomic cation transmembrane transporter activity 33.33% (1/3) 5.72 0.018915 0.044269
GO:0006357 regulation of transcription by RNA polymerase II 33.33% (1/3) 5.65 0.019758 0.044354
GO:0009893 positive regulation of metabolic process 33.33% (1/3) 5.91 0.016552 0.044408
GO:0010605 negative regulation of macromolecule metabolic process 33.33% (1/3) 5.8 0.017786 0.044464
GO:1902680 positive regulation of RNA biosynthetic process 33.33% (1/3) 6.73 0.009376 0.044842
GO:0045893 positive regulation of DNA-templated transcription 33.33% (1/3) 6.73 0.009376 0.044842
GO:0022890 inorganic cation transmembrane transporter activity 33.33% (1/3) 5.86 0.017135 0.044876
GO:0022853 active monoatomic ion transmembrane transporter activity 33.33% (1/3) 7.0 0.007793 0.045115
GO:0015399 primary active transmembrane transporter activity 33.33% (1/3) 5.81 0.017662 0.045183
GO:0010604 positive regulation of macromolecule metabolic process 33.33% (1/3) 5.91 0.016542 0.045491
GO:0050801 monoatomic ion homeostasis 33.33% (1/3) 7.06 0.00749 0.04577
GO:0015318 inorganic molecular entity transmembrane transporter activity 33.33% (1/3) 5.55 0.021126 0.046478
GO:0042626 ATPase-coupled transmembrane transporter activity 33.33% (1/3) 5.91 0.016493 0.046518
GO:0048878 chemical homeostasis 33.33% (1/3) 6.61 0.010214 0.046815
GO:0140358 P-type transmembrane transporter activity 33.33% (1/3) 8.39 0.002987 0.046945
GO:0015662 P-type ion transporter activity 33.33% (1/3) 8.39 0.002987 0.046945
GO:0051173 positive regulation of nitrogen compound metabolic process 33.33% (1/3) 5.93 0.016325 0.047256
GO:0051254 positive regulation of RNA metabolic process 33.33% (1/3) 6.48 0.011171 0.047261
GO:0031325 positive regulation of cellular metabolic process 33.33% (1/3) 6.13 0.01423 0.047433
GO:1901702 salt transmembrane transporter activity 33.33% (1/3) 6.16 0.013968 0.048014
GO:0009890 negative regulation of biosynthetic process 33.33% (1/3) 5.93 0.01631 0.048489
GO:0015075 monoatomic ion transmembrane transporter activity 33.33% (1/3) 5.43 0.022956 0.048561
GO:0048519 negative regulation of biological process 33.33% (1/3) 5.38 0.023895 0.048675
GO:0048523 negative regulation of cellular process 33.33% (1/3) 5.4 0.023477 0.048726
GO:0016887 ATP hydrolysis activity 33.33% (1/3) 5.46 0.022617 0.048782
GO:0042592 homeostatic process 33.33% (1/3) 6.48 0.011161 0.049108
GO:0031327 negative regulation of cellular biosynthetic process 33.33% (1/3) 5.94 0.016241 0.049625
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (3) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms