Coexpression cluster: Cluster_852 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0097159 organic cyclic compound binding 42.86% (27/63) 1.58 0.0 1.4e-05
GO:0006793 phosphorus metabolic process 20.63% (13/63) 2.19 4e-06 0.000127
GO:0006796 phosphate-containing compound metabolic process 20.63% (13/63) 2.2 4e-06 0.000131
GO:0031331 positive regulation of cellular catabolic process 4.76% (3/63) 6.74 3e-06 0.000134
GO:0061014 positive regulation of mRNA catabolic process 4.76% (3/63) 6.74 3e-06 0.000134
GO:0061013 regulation of mRNA catabolic process 4.76% (3/63) 6.56 5e-06 0.000135
GO:0043488 regulation of mRNA stability 4.76% (3/63) 6.59 5e-06 0.000136
GO:0015179 L-amino acid transmembrane transporter activity 4.76% (3/63) 6.5 6e-06 0.000142
GO:0043487 regulation of RNA stability 4.76% (3/63) 6.44 6e-06 0.000149
GO:0003676 nucleic acid binding 25.4% (16/63) 1.95 2e-06 0.000158
GO:0061157 mRNA destabilization 4.76% (3/63) 6.78 3e-06 0.000159
GO:0050779 RNA destabilization 4.76% (3/63) 6.78 3e-06 0.000159
GO:0005488 binding 50.79% (32/63) 1.17 1e-06 0.000162
GO:0140096 catalytic activity, acting on a protein 22.22% (14/63) 1.98 9e-06 0.000173
GO:0019538 protein metabolic process 23.81% (15/63) 1.87 9e-06 0.000173
GO:1903313 positive regulation of mRNA metabolic process 4.76% (3/63) 6.33 8e-06 0.000175
GO:0003674 molecular_function 65.08% (41/63) 0.88 2e-06 0.000179
GO:0036211 protein modification process 22.22% (14/63) 2.16 2e-06 0.00018
GO:0043412 macromolecule modification 22.22% (14/63) 1.98 9e-06 0.000182
GO:0008150 biological_process 53.97% (34/63) 0.96 1.1e-05 0.000194
GO:0048522 positive regulation of cellular process 7.94% (5/63) 3.88 2.4e-05 0.00041
GO:0051446 positive regulation of meiotic cell cycle 3.17% (2/63) 7.99 3e-05 0.000438
GO:0045836 positive regulation of meiotic nuclear division 3.17% (2/63) 7.99 3e-05 0.000438
GO:1903311 regulation of mRNA metabolic process 4.76% (3/63) 5.69 3e-05 0.000478
GO:2000243 positive regulation of reproductive process 3.17% (2/63) 7.84 3.7e-05 0.000515
GO:0040020 regulation of meiotic nuclear division 3.17% (2/63) 7.74 4.2e-05 0.000529
GO:0031329 regulation of cellular catabolic process 4.76% (3/63) 5.52 4.2e-05 0.000548
GO:1901564 organonitrogen compound metabolic process 25.4% (16/63) 1.61 4.1e-05 0.000561
GO:0009896 positive regulation of catabolic process 4.76% (3/63) 5.36 5.9e-05 0.00069
GO:0048518 positive regulation of biological process 7.94% (5/63) 3.62 5.7e-05 0.000698
GO:0051445 regulation of meiotic cell cycle 3.17% (2/63) 7.35 7.3e-05 0.000827
GO:0003333 amino acid transmembrane transport 4.76% (3/63) 5.21 7.9e-05 0.000874
GO:0003677 DNA binding 14.29% (9/63) 2.28 9.4e-05 0.000998
GO:0051785 positive regulation of nuclear division 3.17% (2/63) 7.13 9.8e-05 0.001019
GO:1903825 organic acid transmembrane transport 4.76% (3/63) 4.97 0.00013 0.001238
GO:1905039 carboxylic acid transmembrane transport 4.76% (3/63) 4.97 0.00013 0.001238
GO:0006468 protein phosphorylation 14.29% (9/63) 2.22 0.000128 0.001283
GO:0090068 positive regulation of cell cycle process 3.17% (2/63) 6.8 0.000155 0.001403
GO:0045787 positive regulation of cell cycle 3.17% (2/63) 6.8 0.000155 0.001403
GO:0016310 phosphorylation 14.29% (9/63) 2.17 0.00016 0.00141
GO:0004672 protein kinase activity 14.29% (9/63) 2.17 0.000166 0.001422
GO:0009987 cellular process 38.1% (24/63) 1.05 0.000198 0.001656
GO:0015171 amino acid transmembrane transporter activity 4.76% (3/63) 4.73 0.00021 0.001718
GO:0006865 amino acid transport 4.76% (3/63) 4.71 0.000218 0.001743
GO:0005342 organic acid transmembrane transporter activity 4.76% (3/63) 4.62 0.000265 0.001945
GO:0046943 carboxylic acid transmembrane transporter activity 4.76% (3/63) 4.62 0.000265 0.001945
GO:0010638 positive regulation of organelle organization 3.17% (2/63) 6.46 0.00025 0.001954
GO:0009894 regulation of catabolic process 4.76% (3/63) 4.63 0.00026 0.001989
GO:0050794 regulation of cellular process 17.46% (11/63) 1.79 0.000288 0.002066
GO:0043170 macromolecule metabolic process 26.98% (17/63) 1.31 0.000307 0.002161
GO:0006807 nitrogen compound metabolic process 28.57% (18/63) 1.24 0.000341 0.002354
GO:0016773 phosphotransferase activity, alcohol group as acceptor 14.29% (9/63) 2.02 0.00036 0.002437
GO:0050789 regulation of biological process 17.46% (11/63) 1.72 0.000437 0.002696
GO:0051130 positive regulation of cellular component organization 3.17% (2/63) 6.07 0.000423 0.00271
GO:0015849 organic acid transport 4.76% (3/63) 4.39 0.000416 0.002711
GO:0046942 carboxylic acid transport 4.76% (3/63) 4.39 0.000416 0.002711
GO:0008514 organic anion transmembrane transporter activity 4.76% (3/63) 4.36 0.000448 0.002717
GO:0035639 purine ribonucleoside triphosphate binding 17.46% (11/63) 1.72 0.000433 0.002724
GO:0016301 kinase activity 14.29% (9/63) 1.95 0.000489 0.002915
GO:0015711 organic anion transport 4.76% (3/63) 4.24 0.000562 0.003296
GO:0051783 regulation of nuclear division 3.17% (2/63) 5.74 0.000671 0.003872
GO:0071705 nitrogen compound transport 7.94% (5/63) 2.82 0.000735 0.004108
GO:0044237 cellular metabolic process 26.98% (17/63) 1.2 0.000728 0.004133
GO:0016311 dephosphorylation 4.76% (3/63) 4.07 0.000796 0.004246
GO:0065007 biological regulation 17.46% (11/63) 1.62 0.000787 0.004264
GO:2000241 regulation of reproductive process 3.17% (2/63) 5.62 0.000787 0.004329
GO:0010608 post-transcriptional regulation of gene expression 4.76% (3/63) 4.02 0.000872 0.004582
GO:0016772 transferase activity, transferring phosphorus-containing groups 14.29% (9/63) 1.76 0.001261 0.006526
GO:0008152 metabolic process 31.75% (20/63) 0.98 0.001497 0.007635
GO:0006044 N-acetylglucosamine metabolic process 1.59% (1/63) 9.31 0.001571 0.007791
GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity 1.59% (1/63) 9.31 0.001571 0.007791
GO:0051254 positive regulation of RNA metabolic process 4.76% (3/63) 3.67 0.001752 0.008564
GO:0004438 phosphatidylinositol-3-phosphate phosphatase activity 1.59% (1/63) 9.13 0.001781 0.008587
GO:0035970 peptidyl-threonine dephosphorylation 3.17% (2/63) 5.01 0.001818 0.008649
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 4.76% (3/63) 3.59 0.002047 0.009356
GO:0071702 organic substance transport 7.94% (5/63) 2.49 0.001994 0.009358
GO:0043168 anion binding 19.05% (12/63) 1.36 0.002038 0.009441
GO:0065008 regulation of biological quality 4.76% (3/63) 3.58 0.002096 0.009458
GO:1901363 heterocyclic compound binding 19.05% (12/63) 1.35 0.002209 0.00972
GO:0005634 nucleus 12.7% (8/63) 1.78 0.002203 0.009818
GO:0036094 small molecule binding 19.05% (12/63) 1.34 0.002336 0.010151
GO:0003824 catalytic activity 33.33% (21/63) 0.88 0.002725 0.011283
GO:0003723 RNA binding 9.52% (6/63) 2.11 0.002654 0.011391
GO:0004151 dihydroorotase activity 1.59% (1/63) 8.52 0.002722 0.011408
GO:0044238 primary metabolic process 28.57% (18/63) 0.99 0.002699 0.011447
GO:0032555 purine ribonucleotide binding 17.46% (11/63) 1.38 0.002866 0.011732
GO:0032553 ribonucleotide binding 17.46% (11/63) 1.37 0.003053 0.012351
GO:0097367 carbohydrate derivative binding 17.46% (11/63) 1.36 0.003235 0.012939
GO:0031325 positive regulation of cellular metabolic process 4.76% (3/63) 3.32 0.00347 0.013572
GO:0005672 transcription factor TFIIA complex 1.59% (1/63) 8.18 0.003454 0.013661
GO:0005524 ATP binding 14.29% (9/63) 1.53 0.003637 0.01407
GO:0017076 purine nucleotide binding 17.46% (11/63) 1.33 0.003843 0.014705
GO:0043231 intracellular membrane-bounded organelle 17.46% (11/63) 1.32 0.004131 0.015637
GO:0043167 ion binding 22.22% (14/63) 1.11 0.004274 0.016005
GO:0043227 membrane-bounded organelle 17.46% (11/63) 1.3 0.004372 0.0162
GO:0005697 telomerase holoenzyme complex 1.59% (1/63) 7.76 0.004603 0.016876
GO:0000166 nucleotide binding 17.46% (11/63) 1.26 0.0054 0.018278
GO:1901265 nucleoside phosphate binding 17.46% (11/63) 1.26 0.0054 0.018278
GO:0071786 endoplasmic reticulum tubular network organization 1.59% (1/63) 7.55 0.005333 0.018404
GO:0070034 telomerase RNA binding 1.59% (1/63) 7.6 0.005124 0.018406
GO:0009893 positive regulation of metabolic process 4.76% (3/63) 3.1 0.005288 0.01843
GO:0003729 mRNA binding 4.76% (3/63) 3.08 0.005505 0.018454
GO:0051173 positive regulation of nitrogen compound metabolic process 4.76% (3/63) 3.12 0.005089 0.018469
GO:0071704 organic substance metabolic process 28.57% (18/63) 0.9 0.005213 0.018535
GO:0010604 positive regulation of macromolecule metabolic process 4.76% (3/63) 3.1 0.005279 0.018583
GO:0031418 L-ascorbic acid binding 1.59% (1/63) 7.41 0.005854 0.019259
GO:0006470 protein dephosphorylation 3.17% (2/63) 4.15 0.005819 0.019323
GO:0004722 protein serine/threonine phosphatase activity 3.17% (2/63) 4.13 0.005945 0.019375
GO:0009725 response to hormone 3.17% (2/63) 4.1 0.006189 0.019805
GO:0016791 phosphatase activity 4.76% (3/63) 3.02 0.006167 0.019917
GO:0033043 regulation of organelle organization 3.17% (2/63) 4.06 0.006581 0.020869
GO:0019773 proteasome core complex, alpha-subunit complex 1.59% (1/63) 7.07 0.007417 0.023309
GO:0009719 response to endogenous stimulus 3.17% (2/63) 3.94 0.007715 0.024033
GO:0010564 regulation of cell cycle process 3.17% (2/63) 3.89 0.008172 0.024173
GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process 1.59% (1/63) 6.88 0.008457 0.024202
GO:0052744 phosphatidylinositol monophosphate phosphatase activity 1.59% (1/63) 6.88 0.008457 0.024202
GO:0004656 procollagen-proline 4-dioxygenase activity 1.59% (1/63) 6.93 0.008145 0.024297
GO:0019798 procollagen-proline dioxygenase activity 1.59% (1/63) 6.93 0.008145 0.024297
GO:0031545 peptidyl-proline 4-dioxygenase activity 1.59% (1/63) 6.93 0.008145 0.024297
GO:0019471 4-hydroxyproline metabolic process 1.59% (1/63) 6.93 0.008145 0.024297
GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline 1.59% (1/63) 6.93 0.008145 0.024297
GO:0019511 peptidyl-proline hydroxylation 1.59% (1/63) 6.9 0.008353 0.024299
GO:0031543 peptidyl-proline dioxygenase activity 1.59% (1/63) 6.9 0.008353 0.024299
GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides 1.59% (1/63) 6.84 0.008665 0.024597
GO:0005575 cellular_component 33.33% (21/63) 0.74 0.008984 0.025298
GO:0004721 phosphoprotein phosphatase activity 3.17% (2/63) 3.77 0.009588 0.026787
GO:0051128 regulation of cellular component organization 3.17% (2/63) 3.74 0.009985 0.027675
GO:0009723 response to ethylene 1.59% (1/63) 6.62 0.010119 0.027827
GO:0018126 protein hydroxylation 1.59% (1/63) 6.53 0.010742 0.02931
GO:0106018 phosphatidylinositol-3,5-bisphosphate phosphatase activity 1.59% (1/63) 6.39 0.011882 0.032173
GO:0043226 organelle 17.46% (11/63) 1.1 0.012363 0.032719
GO:0042578 phosphoric ester hydrolase activity 4.76% (3/63) 2.66 0.012219 0.032834
GO:0043229 intracellular organelle 17.46% (11/63) 1.1 0.012354 0.032944
GO:0010468 regulation of gene expression 9.52% (6/63) 1.63 0.013051 0.034283
GO:0010556 regulation of macromolecule biosynthetic process 9.52% (6/63) 1.62 0.013455 0.035083
GO:0005839 proteasome core complex 1.59% (1/63) 6.15 0.013952 0.036112
GO:0009889 regulation of biosynthetic process 9.52% (6/63) 1.59 0.014618 0.037287
GO:0031326 regulation of cellular biosynthetic process 9.52% (6/63) 1.59 0.01457 0.037436
GO:0016192 vesicle-mediated transport 4.76% (3/63) 2.54 0.01514 0.038341
GO:0016577 histone demethylation 1.59% (1/63) 5.96 0.015915 0.038903
GO:0070076 histone lysine demethylation 1.59% (1/63) 5.96 0.015915 0.038903
GO:0033169 histone H3-K9 demethylation 1.59% (1/63) 5.98 0.015709 0.039216
GO:0032454 histone H3K9 demethylase activity 1.59% (1/63) 5.98 0.015709 0.039216
GO:0005737 cytoplasm 9.52% (6/63) 1.56 0.015865 0.039326
GO:0051726 regulation of cell cycle 3.17% (2/63) 3.37 0.016339 0.039663
GO:0032559 adenyl ribonucleotide binding 14.29% (9/63) 1.18 0.017219 0.040952
GO:0008214 protein dealkylation 1.59% (1/63) 5.85 0.017153 0.041073
GO:0006482 protein demethylation 1.59% (1/63) 5.85 0.017153 0.041073
GO:1901071 glucosamine-containing compound metabolic process 1.59% (1/63) 5.83 0.017462 0.041252
GO:0140103 catalytic activity, acting on a glycoprotein 1.59% (1/63) 5.74 0.018595 0.043635
GO:0051252 regulation of RNA metabolic process 7.94% (5/63) 1.69 0.019331 0.045062
GO:0060255 regulation of macromolecule metabolic process 9.52% (6/63) 1.49 0.020135 0.046628
GO:0003924 GTPase activity 3.17% (2/63) 3.19 0.020413 0.046964
GO:0031323 regulation of cellular metabolic process 9.52% (6/63) 1.48 0.020672 0.047251
GO:0030554 adenyl nucleotide binding 14.29% (9/63) 1.12 0.021583 0.048391
GO:0048029 monosaccharide binding 1.59% (1/63) 5.53 0.021472 0.04845
GO:0016787 hydrolase activity 12.7% (8/63) 1.21 0.021444 0.0487
GO:0005525 GTP binding 3.17% (2/63) 3.13 0.022063 0.048845
GO:0032561 guanyl ribonucleotide binding 3.17% (2/63) 3.13 0.022063 0.048845
GO:0008375 acetylglucosaminyltransferase activity 1.59% (1/63) 5.46 0.022498 0.048885
GO:0016740 transferase activity 15.87% (10/63) 1.03 0.022484 0.049157
GO:0019219 regulation of nucleobase-containing compound metabolic process 7.94% (5/63) 1.64 0.022471 0.049435
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (63) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms