Coexpression cluster: Cluster_2310 (Co-expression clusters of Hoang et al 2017 (PRJNA356226))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0019438 aromatic compound biosynthetic process 7.59% (6/79) 2.72 0.000322 0.018612
GO:0044249 cellular biosynthetic process 11.39% (9/79) 1.92 0.000627 0.020683
GO:0098847 sequence-specific single stranded DNA binding 2.53% (2/79) 6.29 0.000314 0.020741
GO:0043047 single-stranded telomeric DNA binding 2.53% (2/79) 6.29 0.000314 0.020741
GO:0051321 meiotic cell cycle 2.53% (2/79) 5.74 0.000674 0.020762
GO:0003697 single-stranded DNA binding 3.8% (3/79) 4.23 0.000586 0.020809
GO:0006260 DNA replication 3.8% (3/79) 4.12 0.000732 0.021134
GO:1901362 organic cyclic compound biosynthetic process 7.59% (6/79) 2.57 0.000554 0.02133
GO:0051276 chromosome organization 5.06% (4/79) 3.44 0.000534 0.022416
GO:0010833 telomere maintenance via telomere lengthening 2.53% (2/79) 6.05 0.000437 0.022429
GO:0009059 macromolecule biosynthetic process 7.59% (6/79) 2.59 0.000512 0.023666
GO:0006278 RNA-templated DNA biosynthetic process 2.53% (2/79) 6.34 0.000295 0.027279
GO:0007004 telomere maintenance via telomerase 2.53% (2/79) 6.34 0.000295 0.027279
GO:0034654 nucleobase-containing compound biosynthetic process 7.59% (6/79) 3.15 6.4e-05 0.029599
GO:1901576 organic substance biosynthetic process 11.39% (9/79) 1.8 0.00113 0.030696
GO:0044271 cellular nitrogen compound biosynthetic process 7.59% (6/79) 2.32 0.001331 0.032362
GO:0042162 telomeric DNA binding 2.53% (2/79) 5.28 0.001265 0.032466
GO:0034249 negative regulation of amide metabolic process 2.53% (2/79) 5.05 0.001718 0.033065
GO:0017148 negative regulation of translation 2.53% (2/79) 5.05 0.001718 0.033065
GO:0032392 DNA geometric change 2.53% (2/79) 4.58 0.003255 0.033413
GO:0032508 DNA duplex unwinding 2.53% (2/79) 4.58 0.003255 0.033413
GO:0009219 pyrimidine deoxyribonucleotide metabolic process 1.27% (1/79) 8.09 0.003675 0.033952
GO:0009221 pyrimidine deoxyribonucleotide biosynthetic process 1.27% (1/79) 8.09 0.003675 0.033952
GO:0046385 deoxyribose phosphate biosynthetic process 1.27% (1/79) 8.09 0.003675 0.033952
GO:0009265 2'-deoxyribonucleotide biosynthetic process 1.27% (1/79) 8.09 0.003675 0.033952
GO:0006352 DNA-templated transcription initiation 2.53% (2/79) 4.55 0.003406 0.034207
GO:0051248 negative regulation of protein metabolic process 2.53% (2/79) 4.6 0.003195 0.034327
GO:0008915 lipid-A-disaccharide synthase activity 1.27% (1/79) 8.04 0.003805 0.034473
GO:0001002 RNA polymerase III type 1 promoter sequence-specific DNA binding 1.27% (1/79) 8.31 0.00315 0.034654
GO:0001003 RNA polymerase III type 2 promoter sequence-specific DNA binding 1.27% (1/79) 8.31 0.00315 0.034654
GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity 1.27% (1/79) 8.31 0.00315 0.034654
GO:0005673 transcription factor TFIIE complex 1.27% (1/79) 8.31 0.00315 0.034654
GO:0018271 biotin-protein ligase activity 1.27% (1/79) 8.31 0.00315 0.034654
GO:0016874 ligase activity 5.06% (4/79) 2.95 0.001876 0.034661
GO:0006289 nucleotide-excision repair 2.53% (2/79) 5.08 0.001652 0.034693
GO:0071897 DNA biosynthetic process 2.53% (2/79) 5.15 0.001511 0.034894
GO:0007049 cell cycle 2.53% (2/79) 4.44 0.003945 0.035047
GO:0009058 biosynthetic process 11.39% (9/79) 1.72 0.001613 0.035491
GO:0001097 TFIIH-class transcription factor complex binding 1.27% (1/79) 8.89 0.002101 0.035957
GO:0003684 damaged DNA binding 2.53% (2/79) 4.93 0.00204 0.036254
GO:0009162 deoxyribonucleoside monophosphate metabolic process 1.27% (1/79) 8.37 0.003019 0.037701
GO:0009157 deoxyribonucleoside monophosphate biosynthetic process 1.27% (1/79) 8.37 0.003019 0.037701
GO:0009177 pyrimidine deoxyribonucleoside monophosphate biosynthetic process 1.27% (1/79) 8.37 0.003019 0.037701
GO:0009176 pyrimidine deoxyribonucleoside monophosphate metabolic process 1.27% (1/79) 8.37 0.003019 0.037701
GO:0006231 dTMP biosynthetic process 1.27% (1/79) 8.57 0.002626 0.037913
GO:0042083 5,10-methylenetetrahydrofolate-dependent methyltransferase activity 1.27% (1/79) 8.57 0.002626 0.037913
GO:0046073 dTMP metabolic process 1.27% (1/79) 8.57 0.002626 0.037913
GO:0004799 thymidylate synthase activity 1.27% (1/79) 8.57 0.002626 0.037913
GO:0018130 heterocycle biosynthetic process 7.59% (6/79) 2.79 0.000247 0.038012
GO:0001729 ceramide kinase activity 1.27% (1/79) 7.65 0.004984 0.038374
GO:0046785 microtubule polymerization 1.27% (1/79) 7.65 0.004984 0.038374
GO:0061863 microtubule plus end polymerase 1.27% (1/79) 7.68 0.004853 0.038655
GO:0030952 establishment or maintenance of cytoskeleton polarity 1.27% (1/79) 7.68 0.004853 0.038655
GO:0030951 establishment or maintenance of microtubule cytoskeleton polarity 1.27% (1/79) 7.68 0.004853 0.038655
GO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway 1.27% (1/79) 8.72 0.002364 0.039001
GO:0000723 telomere maintenance 2.53% (2/79) 4.32 0.004661 0.039154
GO:0032200 telomere organization 2.53% (2/79) 4.32 0.004661 0.039154
GO:0009299 mRNA transcription 1.27% (1/79) 7.57 0.005245 0.039726
GO:0019692 deoxyribose phosphate metabolic process 1.27% (1/79) 7.5 0.005507 0.039752
GO:0009394 2'-deoxyribonucleotide metabolic process 1.27% (1/79) 7.5 0.005507 0.039752
GO:0006996 organelle organization 6.33% (5/79) 2.16 0.005339 0.039782
GO:0004146 dihydrofolate reductase activity 1.27% (1/79) 7.76 0.004591 0.04002
GO:0045900 negative regulation of translational elongation 1.27% (1/79) 8.43 0.002888 0.040435
GO:0006448 regulation of translational elongation 1.27% (1/79) 7.43 0.005768 0.040999
GO:0032774 RNA biosynthetic process 3.8% (3/79) 3.04 0.005944 0.041609
GO:0005662 DNA replication factor A complex 2.53% (2/79) 6.68 0.000183 0.042347
GO:0034248 regulation of amide metabolic process 2.53% (2/79) 4.08 0.006423 0.043638
GO:0006417 regulation of translation 2.53% (2/79) 4.08 0.006423 0.043638
GO:0071103 DNA conformation change 2.53% (2/79) 4.06 0.006533 0.043742
GO:0046654 tetrahydrofolate biosynthetic process 1.27% (1/79) 7.14 0.007075 0.046692
GO:0044238 primary metabolic process 25.32% (20/79) 0.81 0.007319 0.047623
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (79) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms