Coexpression cluster: Cluster_4941 (Co-expression clusters of Hoang et al 2017 (PRJNA356226))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009057 macromolecule catabolic process 22.22% (2/9) 4.62 0.002819 0.030074
GO:0048367 shoot system development 11.11% (1/9) 8.35 0.003066 0.030189
GO:0070647 protein modification by small protein conjugation or removal 22.22% (2/9) 4.64 0.00275 0.031997
GO:0048731 system development 11.11% (1/9) 8.14 0.003529 0.032265
GO:0141047 molecular tag activity 11.11% (1/9) 7.86 0.00429 0.032302
GO:0031386 protein tag activity 11.11% (1/9) 7.86 0.00429 0.032302
GO:0016973 poly(A)+ mRNA export from nucleus 11.11% (1/9) 9.31 0.001571 0.033525
GO:0008150 biological_process 77.78% (7/9) 1.48 0.00266 0.03405
GO:0043687 post-translational protein modification 22.22% (2/9) 4.34 0.004127 0.035219
GO:0031080 nuclear pore outer ring 11.11% (1/9) 9.44 0.001437 0.036784
GO:0006406 mRNA export from nucleus 11.11% (1/9) 7.16 0.006987 0.037266
GO:0051028 mRNA transport 11.11% (1/9) 7.16 0.006987 0.037266
GO:0030968 endoplasmic reticulum unfolded protein response 11.11% (1/9) 8.57 0.002633 0.037445
GO:0000972 transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery 11.11% (1/9) 8.69 0.002424 0.038778
GO:0044389 ubiquitin-like protein ligase binding 11.11% (1/9) 7.19 0.006809 0.039615
GO:0030433 ubiquitin-dependent ERAD pathway 11.11% (1/9) 6.98 0.007895 0.040422
GO:0048364 root development 11.11% (1/9) 8.8 0.002244 0.041038
GO:0006508 proteolysis 22.22% (2/9) 3.97 0.006758 0.041193
GO:1901698 response to nitrogen compound 11.11% (1/9) 6.34 0.012288 0.041392
GO:0051082 unfolded protein binding 11.11% (1/9) 6.22 0.013354 0.041691
GO:0004843 cysteine-type deubiquitinase activity 11.11% (1/9) 6.36 0.012081 0.041793
GO:0008422 beta-glucosidase activity 11.11% (1/9) 6.24 0.013192 0.042213
GO:0050658 RNA transport 11.11% (1/9) 6.38 0.011918 0.042375
GO:0050657 nucleic acid transport 11.11% (1/9) 6.38 0.011918 0.042375
GO:0051236 establishment of RNA localization 11.11% (1/9) 6.38 0.011918 0.042375
GO:0016579 protein deubiquitination 11.11% (1/9) 6.16 0.013917 0.042412
GO:0031625 ubiquitin protein ligase binding 11.11% (1/9) 7.23 0.006645 0.042528
GO:0034976 response to endoplasmic reticulum stress 11.11% (1/9) 6.11 0.014375 0.042791
GO:0099402 plant organ development 11.11% (1/9) 7.37 0.006034 0.042911
GO:0051170 import into nucleus 11.11% (1/9) 6.63 0.010064 0.04294
GO:0101005 deubiquitinase activity 11.11% (1/9) 6.24 0.013118 0.043052
GO:0017056 structural constituent of nuclear pore 11.11% (1/9) 7.28 0.006407 0.043161
GO:0009056 catabolic process 22.22% (2/9) 3.62 0.010871 0.043485
GO:0034504 protein localization to nucleus 11.11% (1/9) 6.64 0.00996 0.043962
GO:0006606 protein import into nucleus 11.11% (1/9) 6.64 0.00996 0.043962
GO:0019783 ubiquitin-like protein peptidase activity 11.11% (1/9) 6.04 0.015114 0.043968
GO:0010243 response to organonitrogen compound 11.11% (1/9) 6.54 0.010717 0.044251
GO:0051603 proteolysis involved in protein catabolic process 22.22% (2/9) 5.13 0.001403 0.044899
GO:0015926 glucosidase activity 11.11% (1/9) 5.97 0.015808 0.044966
GO:0036503 ERAD pathway 11.11% (1/9) 6.76 0.009188 0.045233
GO:0070646 protein modification by small protein removal 11.11% (1/9) 5.92 0.016384 0.04559
GO:0006405 RNA export from nucleus 11.11% (1/9) 6.4 0.011799 0.045767
GO:1901575 organic substance catabolic process 22.22% (2/9) 3.69 0.00988 0.046838
GO:0015931 nucleobase-containing compound transport 11.11% (1/9) 5.76 0.018286 0.048763
GO:0051168 nuclear export 11.11% (1/9) 5.78 0.018006 0.049038
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (9) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms