Coexpression cluster: Cluster_5187 (Co-expression clusters of Hoang et al 2017 (PRJNA356226))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0032991 protein-containing complex 100.0% (2/2) 4.43 0.002144 0.010605
GO:0019222 regulation of metabolic process 100.0% (2/2) 4.82 0.001247 0.01066
GO:0051248 negative regulation of protein metabolic process 50.0% (1/2) 8.9 0.002092 0.010927
GO:0031323 regulation of cellular metabolic process 100.0% (2/2) 4.87 0.001171 0.011007
GO:0017148 negative regulation of translation 50.0% (1/2) 9.36 0.001524 0.011018
GO:0034249 negative regulation of amide metabolic process 50.0% (1/2) 9.36 0.001524 0.011018
GO:0000932 P-body 50.0% (1/2) 9.13 0.001786 0.011195
GO:0035770 ribonucleoprotein granule 50.0% (1/2) 8.94 0.002032 0.011238
GO:0016592 mediator complex 50.0% (1/2) 9.17 0.001733 0.011637
GO:0009889 regulation of biosynthetic process 100.0% (2/2) 4.98 0.001001 0.011759
GO:0036464 cytoplasmic ribonucleoprotein granule 50.0% (1/2) 8.96 0.002003 0.011765
GO:0050794 regulation of cellular process 100.0% (2/2) 4.31 0.002541 0.011942
GO:0060255 regulation of macromolecule metabolic process 100.0% (2/2) 4.88 0.001157 0.012083
GO:0034248 regulation of amide metabolic process 50.0% (1/2) 8.38 0.003 0.01226
GO:0006417 regulation of translation 50.0% (1/2) 8.38 0.003 0.01226
GO:0050789 regulation of biological process 100.0% (2/2) 4.24 0.002804 0.012552
GO:0065007 biological regulation 100.0% (2/2) 4.14 0.003232 0.012657
GO:0006402 mRNA catabolic process 50.0% (1/2) 8.1 0.003648 0.013188
GO:0031326 regulation of cellular biosynthetic process 100.0% (2/2) 4.98 0.000999 0.013419
GO:0045944 positive regulation of transcription by RNA polymerase II 50.0% (1/2) 8.1 0.003641 0.01369
GO:0006401 RNA catabolic process 50.0% (1/2) 7.85 0.004319 0.015035
GO:0010556 regulation of macromolecule biosynthetic process 100.0% (2/2) 5.01 0.000964 0.01511
GO:0003712 transcription coregulator activity 50.0% (1/2) 7.68 0.00488 0.016382
GO:0051172 negative regulation of nitrogen compound metabolic process 50.0% (1/2) 7.54 0.005358 0.017367
GO:0010468 regulation of gene expression 100.0% (2/2) 5.02 0.000951 0.017888
GO:0010608 post-transcriptional regulation of gene expression 50.0% (1/2) 7.42 0.005846 0.018316
GO:1902680 positive regulation of RNA biosynthetic process 50.0% (1/2) 7.32 0.00626 0.01839
GO:0045893 positive regulation of DNA-templated transcription 50.0% (1/2) 7.32 0.00626 0.01839
GO:0010629 negative regulation of gene expression 50.0% (1/2) 6.93 0.0082 0.018801
GO:0034655 nucleobase-containing compound catabolic process 50.0% (1/2) 6.95 0.008045 0.018905
GO:0010557 positive regulation of macromolecule biosynthetic process 50.0% (1/2) 7.02 0.007667 0.018965
GO:0009891 positive regulation of biosynthetic process 50.0% (1/2) 7.02 0.007667 0.018965
GO:0031328 positive regulation of cellular biosynthetic process 50.0% (1/2) 7.02 0.007667 0.018965
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 50.0% (1/2) 6.98 0.007882 0.018998
GO:0044270 cellular nitrogen compound catabolic process 50.0% (1/2) 6.83 0.00877 0.019172
GO:0046700 heterocycle catabolic process 50.0% (1/2) 6.83 0.00877 0.019172
GO:0099080 supramolecular complex 50.0% (1/2) 7.21 0.006758 0.01925
GO:0009893 positive regulation of metabolic process 50.0% (1/2) 6.49 0.011065 0.019625
GO:0010604 positive regulation of macromolecule metabolic process 50.0% (1/2) 6.49 0.011059 0.019991
GO:0009892 negative regulation of metabolic process 50.0% (1/2) 6.36 0.012151 0.020038
GO:0051254 positive regulation of RNA metabolic process 50.0% (1/2) 7.06 0.007461 0.020038
GO:0016071 mRNA metabolic process 50.0% (1/2) 6.44 0.011512 0.02004
GO:0080090 regulation of primary metabolic process 100.0% (2/2) 5.1 0.000853 0.020047
GO:0051173 positive regulation of nitrogen compound metabolic process 50.0% (1/2) 6.51 0.010913 0.020114
GO:0031324 negative regulation of cellular metabolic process 50.0% (1/2) 6.37 0.012084 0.020285
GO:0031325 positive regulation of cellular metabolic process 50.0% (1/2) 6.71 0.009509 0.020315
GO:0010605 negative regulation of macromolecule metabolic process 50.0% (1/2) 6.39 0.011893 0.020325
GO:0051246 regulation of protein metabolic process 50.0% (1/2) 7.08 0.007362 0.020353
GO:0009890 negative regulation of biosynthetic process 50.0% (1/2) 6.52 0.010903 0.020498
GO:1901361 organic cyclic compound catabolic process 50.0% (1/2) 6.63 0.010039 0.020515
GO:0019439 aromatic compound catabolic process 50.0% (1/2) 6.66 0.009867 0.020611
GO:0031327 negative regulation of cellular biosynthetic process 50.0% (1/2) 6.52 0.010857 0.020827
GO:0048518 positive regulation of biological process 50.0% (1/2) 6.28 0.012865 0.02085
GO:0048522 positive regulation of cellular process 50.0% (1/2) 6.54 0.010741 0.021034
GO:0006357 regulation of transcription by RNA polymerase II 50.0% (1/2) 6.24 0.013215 0.021055
GO:0010558 negative regulation of macromolecule biosynthetic process 50.0% (1/2) 6.56 0.010552 0.021105
GO:0048523 negative regulation of cellular process 50.0% (1/2) 5.99 0.015713 0.024618
GO:0048519 negative regulation of biological process 50.0% (1/2) 5.96 0.015994 0.024646
GO:0051171 regulation of nitrogen compound metabolic process 100.0% (2/2) 5.11 0.000837 0.026229
GO:0009057 macromolecule catabolic process 50.0% (1/2) 5.79 0.017997 0.026853
GO:0140535 intracellular protein-containing complex 50.0% (1/2) 5.8 0.017832 0.027036
GO:0044248 cellular catabolic process 50.0% (1/2) 5.61 0.020327 0.029856
GO:0030015 CCR4-NOT core complex 50.0% (1/2) 10.47 0.000705 0.033156
GO:0043228 non-membrane-bounded organelle 50.0% (1/2) 5.32 0.024835 0.035371
GO:0043232 intracellular non-membrane-bounded organelle 50.0% (1/2) 5.32 0.024832 0.035911
GO:0140513 nuclear protein-containing complex 50.0% (1/2) 5.07 0.029605 0.041535
GO:0140110 transcription regulator activity 50.0% (1/2) 4.97 0.031751 0.043891
GO:1901575 organic substance catabolic process 50.0% (1/2) 4.86 0.034199 0.04659
GO:0009056 catabolic process 50.0% (1/2) 4.79 0.035932 0.048251
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms