Coexpression cluster: Cluster_1640 (Co-expression clusters of Hoang et al 2017 (PRJNA356226))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0051219 phosphoprotein binding 1.45% (3/207) 7.63 1e-06 5.6e-05
GO:0045309 protein phosphorylated amino acid binding 1.45% (3/207) 7.63 1e-06 5.6e-05
GO:0009690 cytokinin metabolic process 1.93% (4/207) 5.9 1e-06 6.7e-05
GO:0050815 phosphoserine residue binding 1.45% (3/207) 7.66 0.0 8.7e-05
GO:1990269 RNA polymerase II C-terminal domain phosphoserine binding 1.45% (3/207) 7.66 0.0 8.7e-05
GO:0099122 RNA polymerase II C-terminal domain binding 1.45% (3/207) 7.66 0.0 8.7e-05
GO:0032968 positive regulation of transcription elongation by RNA polymerase II 1.93% (4/207) 5.74 1e-06 8.8e-05
GO:0034243 regulation of transcription elongation by RNA polymerase II 1.93% (4/207) 5.69 1e-06 8.9e-05
GO:0016593 Cdc73/Paf1 complex 1.45% (3/207) 6.44 6e-06 0.000374
GO:0032786 positive regulation of DNA-templated transcription, elongation 1.93% (4/207) 5.07 7e-06 0.000383
GO:0032784 regulation of DNA-templated transcription elongation 1.93% (4/207) 4.78 1.6e-05 0.000765
GO:0000993 RNA polymerase II complex binding 1.45% (3/207) 5.44 5e-05 0.002048
GO:0042445 hormone metabolic process 1.93% (4/207) 4.37 4.9e-05 0.002148
GO:0006368 transcription elongation by RNA polymerase II 1.45% (3/207) 5.24 7.7e-05 0.002913
GO:0043175 RNA polymerase core enzyme binding 1.45% (3/207) 5.15 9.2e-05 0.003032
GO:0006354 DNA-templated transcription elongation 1.45% (3/207) 5.16 9e-05 0.003157
GO:0010817 regulation of hormone levels 1.93% (4/207) 4.07 0.000106 0.003294
GO:0070063 RNA polymerase binding 1.45% (3/207) 4.96 0.000136 0.003994
GO:0009308 amine metabolic process 1.93% (4/207) 3.83 0.000201 0.005053
GO:0001099 basal RNA polymerase II transcription machinery binding 1.45% (3/207) 4.78 0.000194 0.005126
GO:0001098 basal transcription machinery binding 1.45% (3/207) 4.78 0.000194 0.005126
GO:0008023 transcription elongation factor complex 1.45% (3/207) 4.48 0.000358 0.008614
GO:0019139 cytokinin dehydrogenase activity 0.97% (2/207) 6.08 0.000423 0.00896
GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation 0.97% (2/207) 6.09 0.000414 0.009118
GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation 0.97% (2/207) 6.09 0.000414 0.009118
GO:0045944 positive regulation of transcription by RNA polymerase II 1.93% (4/207) 3.41 0.000608 0.012363
GO:0009691 cytokinin biosynthetic process 0.97% (2/207) 5.74 0.000678 0.013291
GO:0042446 hormone biosynthetic process 0.97% (2/207) 5.36 0.001129 0.021335
GO:0065008 regulation of biological quality 2.42% (5/207) 2.6 0.001549 0.028265
GO:0046872 metal ion binding 7.25% (15/207) 1.25 0.001919 0.033835
GO:0016491 oxidoreductase activity 6.76% (14/207) 1.28 0.002248 0.038356
GO:0043169 cation binding 7.25% (15/207) 1.21 0.002466 0.040763
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (207) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms