Coexpression cluster: Cluster_3107 (Co-expression clusters of Hoang et al 2017 (PRJNA356226))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0033331 ent-kaurene metabolic process 33.33% (2/6) 12.86 0.0 1e-06
GO:0010241 ent-kaurene oxidation to kaurenoic acid 33.33% (2/6) 12.86 0.0 1e-06
GO:0052615 ent-kaurene oxidase activity 33.33% (2/6) 12.86 0.0 1e-06
GO:0009686 gibberellin biosynthetic process 33.33% (2/6) 10.63 1e-06 2.4e-05
GO:0009685 gibberellin metabolic process 33.33% (2/6) 9.98 2e-06 4.8e-05
GO:0016102 diterpenoid biosynthetic process 33.33% (2/6) 9.82 2e-06 4.9e-05
GO:0009707 chloroplast outer membrane 33.33% (2/6) 9.32 4e-06 5.4e-05
GO:0009527 plastid outer membrane 33.33% (2/6) 9.32 4e-06 5.4e-05
GO:0120252 hydrocarbon metabolic process 33.33% (2/6) 9.54 3e-06 5.5e-05
GO:0016101 diterpenoid metabolic process 33.33% (2/6) 9.41 4e-06 5.8e-05
GO:0042214 terpene metabolic process 33.33% (2/6) 9.55 3e-06 6.1e-05
GO:0031969 chloroplast membrane 33.33% (2/6) 8.6 1.1e-05 0.000133
GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen 33.33% (2/6) 8.19 1.9e-05 0.000218
GO:0016114 terpenoid biosynthetic process 33.33% (2/6) 7.6 4.4e-05 0.000461
GO:0006721 terpenoid metabolic process 33.33% (2/6) 7.37 6.1e-05 0.000593
GO:0008299 isoprenoid biosynthetic process 33.33% (2/6) 7.28 6.9e-05 0.000627
GO:0042170 plastid membrane 33.33% (2/6) 7.14 8.3e-05 0.000716
GO:0031968 organelle outer membrane 33.33% (2/6) 7.02 9.8e-05 0.000797
GO:0019867 outer membrane 33.33% (2/6) 6.95 0.000108 0.000832
GO:0006720 isoprenoid metabolic process 33.33% (2/6) 6.82 0.000129 0.00094
GO:0005783 endoplasmic reticulum 33.33% (2/6) 6.17 0.000317 0.002207
GO:0016053 organic acid biosynthetic process 33.33% (2/6) 6.0 0.000402 0.002553
GO:0046394 carboxylic acid biosynthetic process 33.33% (2/6) 6.0 0.000402 0.002553
GO:1903322 positive regulation of protein modification by small protein conjugation or removal 16.67% (1/6) 10.48 0.000699 0.003188
GO:0031398 positive regulation of protein ubiquitination 16.67% (1/6) 10.48 0.000699 0.003188
GO:1905786 positive regulation of anaphase-promoting complex-dependent catabolic process 16.67% (1/6) 10.48 0.000699 0.003188
GO:1990757 ubiquitin ligase activator activity 16.67% (1/6) 10.48 0.000699 0.003188
GO:1905784 regulation of anaphase-promoting complex-dependent catabolic process 16.67% (1/6) 10.48 0.000699 0.003188
GO:0097027 ubiquitin-protein transferase activator activity 16.67% (1/6) 10.48 0.000699 0.003188
GO:1904668 positive regulation of ubiquitin protein ligase activity 16.67% (1/6) 10.48 0.000699 0.003188
GO:0051443 positive regulation of ubiquitin-protein transferase activity 16.67% (1/6) 10.48 0.000699 0.003188
GO:0010997 anaphase-promoting complex binding 16.67% (1/6) 10.42 0.000729 0.003224
GO:1903320 regulation of protein modification by small protein conjugation or removal 16.67% (1/6) 10.14 0.000888 0.003242
GO:0031396 regulation of protein ubiquitination 16.67% (1/6) 10.14 0.000888 0.003242
GO:0044283 small molecule biosynthetic process 33.33% (2/6) 5.44 0.000867 0.003331
GO:0051438 regulation of ubiquitin-protein transferase activity 16.67% (1/6) 10.29 0.000798 0.003331
GO:1904666 regulation of ubiquitin protein ligase activity 16.67% (1/6) 10.29 0.000798 0.003331
GO:0004497 monooxygenase activity 33.33% (2/6) 5.46 0.00084 0.003408
GO:0005506 iron ion binding 33.33% (2/6) 5.44 0.000865 0.003412
GO:0008610 lipid biosynthetic process 33.33% (2/6) 5.3 0.001048 0.003558
GO:0055106 ubiquitin-protein transferase regulator activity 16.67% (1/6) 9.93 0.001028 0.003573
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 33.33% (2/6) 5.32 0.001027 0.003657
GO:0046906 tetrapyrrole binding 33.33% (2/6) 5.24 0.001136 0.003684
GO:0020037 heme binding 33.33% (2/6) 5.25 0.00112 0.003718
GO:1901875 positive regulation of post-translational protein modification 16.67% (1/6) 9.63 0.001257 0.003991
GO:0098588 bounding membrane of organelle 33.33% (2/6) 5.62 0.000679 0.004132
GO:1901873 regulation of post-translational protein modification 16.67% (1/6) 9.36 0.001517 0.004613
GO:0031090 organelle membrane 33.33% (2/6) 5.03 0.001515 0.004707
GO:0031145 anaphase-promoting complex-dependent catabolic process 16.67% (1/6) 8.78 0.002274 0.006777
GO:0044255 cellular lipid metabolic process 33.33% (2/6) 4.72 0.002334 0.006814
GO:0051347 positive regulation of transferase activity 16.67% (1/6) 8.69 0.002424 0.006939
GO:0005680 anaphase-promoting complex 16.67% (1/6) 8.6 0.002573 0.007225
GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process 16.67% (1/6) 8.25 0.00327 0.008093
GO:2000060 positive regulation of ubiquitin-dependent protein catabolic process 16.67% (1/6) 8.25 0.00327 0.008093
GO:0006082 organic acid metabolic process 33.33% (2/6) 4.51 0.003079 0.008173
GO:0000152 nuclear ubiquitin ligase complex 16.67% (1/6) 8.29 0.003201 0.008198
GO:0031401 positive regulation of protein modification process 16.67% (1/6) 8.3 0.003161 0.008241
GO:0043436 oxoacid metabolic process 33.33% (2/6) 4.51 0.003074 0.008312
GO:0019752 carboxylic acid metabolic process 33.33% (2/6) 4.52 0.003057 0.008421
GO:1903052 positive regulation of proteolysis involved in protein catabolic process 16.67% (1/6) 8.12 0.003599 0.008614
GO:1901800 positive regulation of proteasomal protein catabolic process 16.67% (1/6) 8.12 0.003599 0.008614
GO:0032434 regulation of proteasomal ubiquitin-dependent protein catabolic process 16.67% (1/6) 8.09 0.003659 0.008616
GO:2000058 regulation of ubiquitin-dependent protein catabolic process 16.67% (1/6) 8.01 0.003868 0.008963
GO:0045862 positive regulation of proteolysis 16.67% (1/6) 7.96 0.003997 0.009118
GO:0006629 lipid metabolic process 33.33% (2/6) 4.3 0.004106 0.009224
GO:0061136 regulation of proteasomal protein catabolic process 16.67% (1/6) 7.86 0.004296 0.009361
GO:0045732 positive regulation of protein catabolic process 16.67% (1/6) 7.86 0.004286 0.00948
GO:1903050 regulation of proteolysis involved in protein catabolic process 16.67% (1/6) 7.79 0.004505 0.009672
GO:0030162 regulation of proteolysis 16.67% (1/6) 7.65 0.004952 0.010478
GO:0042176 regulation of protein catabolic process 16.67% (1/6) 7.61 0.005111 0.01066
GO:0046914 transition metal ion binding 33.33% (2/6) 3.98 0.006289 0.012752
GO:0043085 positive regulation of catalytic activity 16.67% (1/6) 7.32 0.006234 0.012819
GO:0044093 positive regulation of molecular function 16.67% (1/6) 7.22 0.006691 0.013382
GO:0051338 regulation of transferase activity 16.67% (1/6) 7.19 0.00683 0.013475
GO:0009896 positive regulation of catabolic process 16.67% (1/6) 7.16 0.006949 0.013527
GO:0044281 small molecule metabolic process 33.33% (2/6) 3.81 0.007945 0.015263
GO:0031399 regulation of protein modification process 16.67% (1/6) 6.94 0.00811 0.015377
GO:0051247 positive regulation of protein metabolic process 16.67% (1/6) 6.68 0.009725 0.018204
GO:0031461 cullin-RING ubiquitin ligase complex 16.67% (1/6) 6.62 0.010151 0.01876
GO:0016491 oxidoreductase activity 33.33% (2/6) 3.58 0.010867 0.019833
GO:0009894 regulation of catabolic process 16.67% (1/6) 6.43 0.011507 0.02074
GO:0044249 cellular biosynthetic process 33.33% (2/6) 3.47 0.012558 0.022359
GO:0046872 metal ion binding 33.33% (2/6) 3.45 0.012902 0.022425
GO:0050790 regulation of catalytic activity 16.67% (1/6) 6.27 0.01288 0.022657
GO:0043169 cation binding 33.33% (2/6) 3.41 0.013575 0.023046
GO:0065009 regulation of molecular function 16.67% (1/6) 6.21 0.013433 0.023074
GO:0008047 enzyme activator activity 16.67% (1/6) 6.06 0.014874 0.024677
GO:1901576 organic substance biosynthetic process 33.33% (2/6) 3.35 0.014749 0.024751
GO:0000151 ubiquitin ligase complex 16.67% (1/6) 5.96 0.015919 0.025823
GO:0140677 molecular function activator activity 16.67% (1/6) 5.97 0.01581 0.025936
GO:0009058 biosynthetic process 33.33% (2/6) 3.27 0.016283 0.026125
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process 16.67% (1/6) 5.81 0.017641 0.027996
GO:0010498 proteasomal protein catabolic process 16.67% (1/6) 5.68 0.019391 0.030442
GO:0030163 protein catabolic process 16.67% (1/6) 5.55 0.021109 0.032786
GO:0051246 regulation of protein metabolic process 16.67% (1/6) 5.5 0.021923 0.033692
GO:0006511 ubiquitin-dependent protein catabolic process 16.67% (1/6) 5.2 0.02696 0.041002
GO:0019941 modification-dependent protein catabolic process 16.67% (1/6) 5.06 0.029611 0.04457
GO:0043632 modification-dependent macromolecule catabolic process 16.67% (1/6) 5.0 0.030847 0.045956
GO:0009893 positive regulation of metabolic process 16.67% (1/6) 4.91 0.03283 0.047457
GO:0051173 positive regulation of nitrogen compound metabolic process 16.67% (1/6) 4.93 0.032383 0.047757
GO:0010604 positive regulation of macromolecule metabolic process 16.67% (1/6) 4.91 0.032811 0.047904
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (6) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms