Coexpression cluster: Cluster_8673 (Co-expression clusters of Hoang et al 2017 (PRJNA356226))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005674 transcription factor TFIIF complex 50.0% (1/2) 13.11 0.000113 0.005262
GO:0001096 TFIIF-class transcription factor complex binding 50.0% (1/2) 13.44 9e-05 0.008357
GO:0140223 general transcription initiation factor activity 50.0% (1/2) 9.74 0.001168 0.009051
GO:0032784 regulation of DNA-templated transcription elongation 50.0% (1/2) 9.48 0.001404 0.009327
GO:0032786 positive regulation of DNA-templated transcription, elongation 50.0% (1/2) 9.77 0.001148 0.009705
GO:0008134 transcription factor binding 50.0% (1/2) 9.52 0.001361 0.009735
GO:0001099 basal RNA polymerase II transcription machinery binding 50.0% (1/2) 9.89 0.001051 0.009778
GO:0001098 basal transcription machinery binding 50.0% (1/2) 9.89 0.001051 0.009778
GO:0016251 RNA polymerase II general transcription initiation factor activity 50.0% (1/2) 9.99 0.000985 0.011449
GO:0001091 RNA polymerase II general transcription initiation factor binding 50.0% (1/2) 11.34 0.000386 0.011967
GO:0140296 general transcription initiation factor binding 50.0% (1/2) 10.07 0.000932 0.012378
GO:0006352 DNA-templated transcription initiation 50.0% (1/2) 8.85 0.002162 0.013405
GO:0034243 regulation of transcription elongation by RNA polymerase II 50.0% (1/2) 10.38 0.000749 0.013926
GO:0006367 transcription initiation at RNA polymerase II promoter 50.0% (1/2) 10.08 0.000922 0.014286
GO:0090575 RNA polymerase II transcription regulator complex 50.0% (1/2) 8.54 0.002691 0.01564
GO:0032968 positive regulation of transcription elongation by RNA polymerase II 50.0% (1/2) 10.44 0.000722 0.016788
GO:0045944 positive regulation of transcription by RNA polymerase II 50.0% (1/2) 8.1 0.003641 0.019919
GO:0005667 transcription regulator complex 50.0% (1/2) 7.52 0.005457 0.028196
GO:0045893 positive regulation of DNA-templated transcription 50.0% (1/2) 7.32 0.00626 0.029111
GO:1902680 positive regulation of RNA biosynthetic process 50.0% (1/2) 7.32 0.00626 0.029111
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 50.0% (1/2) 6.98 0.007882 0.029322
GO:0009891 positive regulation of biosynthetic process 50.0% (1/2) 7.02 0.007667 0.029708
GO:0031328 positive regulation of cellular biosynthetic process 50.0% (1/2) 7.02 0.007667 0.029708
GO:0010557 positive regulation of macromolecule biosynthetic process 50.0% (1/2) 7.02 0.007667 0.029708
GO:0031325 positive regulation of cellular metabolic process 50.0% (1/2) 6.71 0.009509 0.032754
GO:0032774 RNA biosynthetic process 50.0% (1/2) 6.76 0.009188 0.032864
GO:0051254 positive regulation of RNA metabolic process 50.0% (1/2) 7.06 0.007461 0.033042
GO:0009893 positive regulation of metabolic process 50.0% (1/2) 6.49 0.011065 0.033196
GO:0010604 positive regulation of macromolecule metabolic process 50.0% (1/2) 6.49 0.011059 0.034282
GO:0051173 positive regulation of nitrogen compound metabolic process 50.0% (1/2) 6.51 0.010913 0.034997
GO:0048522 positive regulation of cellular process 50.0% (1/2) 6.54 0.010741 0.035675
GO:0006357 regulation of transcription by RNA polymerase II 50.0% (1/2) 6.24 0.013215 0.037244
GO:0048518 positive regulation of biological process 50.0% (1/2) 6.28 0.012865 0.037389
GO:0044877 protein-containing complex binding 50.0% (1/2) 6.09 0.014607 0.039954
GO:0034654 nucleobase-containing compound biosynthetic process 50.0% (1/2) 5.87 0.017053 0.045313
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms