Coexpression cluster: Cluster_4724 (Co-expression clusters of Hoang et al 2017 (PRJNA356226))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0019511 peptidyl-proline hydroxylation 33.33% (1/3) 11.29 0.000399 0.003049
GO:0031543 peptidyl-proline dioxygenase activity 33.33% (1/3) 11.29 0.000399 0.003049
GO:0018126 protein hydroxylation 33.33% (1/3) 10.93 0.000514 0.003599
GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline 33.33% (1/3) 11.33 0.000389 0.003634
GO:0019471 4-hydroxyproline metabolic process 33.33% (1/3) 11.33 0.000389 0.003634
GO:0031545 peptidyl-proline 4-dioxygenase activity 33.33% (1/3) 11.33 0.000389 0.003634
GO:0019798 procollagen-proline dioxygenase activity 33.33% (1/3) 11.33 0.000389 0.003634
GO:0004656 procollagen-proline 4-dioxygenase activity 33.33% (1/3) 11.33 0.000389 0.003634
GO:0016742 hydroxymethyl-, formyl- and related transferase activity 33.33% (1/3) 10.57 0.000659 0.004257
GO:0071951 conversion of methionyl-tRNA to N-formyl-methionyl-tRNA 33.33% (1/3) 12.86 0.000135 0.005661
GO:0004479 methionyl-tRNA formyltransferase activity 33.33% (1/3) 12.86 0.000135 0.005661
GO:0031418 L-ascorbic acid binding 33.33% (1/3) 11.8 0.00028 0.00587
GO:0048029 monosaccharide binding 33.33% (1/3) 9.92 0.001033 0.006198
GO:0019988 charged-tRNA amino acid modification 33.33% (1/3) 12.09 0.00023 0.00643
GO:0031406 carboxylic acid binding 33.33% (1/3) 9.12 0.001796 0.00943
GO:0043177 organic acid binding 33.33% (1/3) 9.12 0.001796 0.00943
GO:0018208 peptidyl-proline modification 33.33% (1/3) 8.98 0.001976 0.009762
GO:0006575 cellular modified amino acid metabolic process 33.33% (1/3) 8.62 0.002539 0.011848
GO:0016706 2-oxoglutarate-dependent dioxygenase activity 33.33% (1/3) 8.35 0.003072 0.013582
GO:0006400 tRNA modification 33.33% (1/3) 7.52 0.005427 0.021707
GO:0019842 vitamin binding 33.33% (1/3) 7.58 0.005218 0.021915
GO:0051213 dioxygenase activity 33.33% (1/3) 7.42 0.00582 0.02222
GO:0008033 tRNA processing 33.33% (1/3) 7.16 0.006983 0.025503
GO:0046483 heterocycle metabolic process 66.67% (2/3) 3.73 0.007347 0.025713
GO:1901360 organic cyclic compound metabolic process 66.67% (2/3) 3.65 0.008135 0.027333
GO:0043412 macromolecule modification 66.67% (2/3) 3.56 0.009172 0.029632
GO:0140101 catalytic activity, acting on a tRNA 33.33% (1/3) 6.52 0.010863 0.033798
GO:1901605 alpha-amino acid metabolic process 33.33% (1/3) 6.35 0.012241 0.036722
GO:0030246 carbohydrate binding 33.33% (1/3) 6.11 0.014447 0.036775
GO:0006399 tRNA metabolic process 33.33% (1/3) 6.05 0.015006 0.037074
GO:0043227 membrane-bounded organelle 66.67% (2/3) 3.24 0.014275 0.037471
GO:0018193 peptidyl-amino acid modification 33.33% (1/3) 6.13 0.014185 0.038438
GO:0043231 intracellular membrane-bounded organelle 66.67% (2/3) 3.25 0.014067 0.039387
GO:0005783 endoplasmic reticulum 33.33% (1/3) 6.17 0.013824 0.040043
GO:0043226 organelle 66.67% (2/3) 3.03 0.018868 0.041709
GO:0043229 intracellular organelle 66.67% (2/3) 3.03 0.018865 0.042828
GO:0009451 RNA modification 33.33% (1/3) 5.76 0.018378 0.042881
GO:0016741 transferase activity, transferring one-carbon groups 33.33% (1/3) 5.78 0.018121 0.043491
GO:0005739 mitochondrion 33.33% (1/3) 5.51 0.02185 0.045885
GO:0006520 amino acid metabolic process 33.33% (1/3) 5.43 0.022961 0.045922
GO:0034470 ncRNA processing 33.33% (1/3) 5.53 0.021432 0.04616
GO:0005506 iron ion binding 33.33% (1/3) 5.44 0.022838 0.04679
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 33.33% (1/3) 5.32 0.024897 0.048635
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (3) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms