Coexpression cluster: Cluster_4474 (Co-expression clusters of Hoang et al 2017 (PRJNA356226))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006302 double-strand break repair 50.0% (1/2) 7.42 0.005812 0.020344
GO:0036094 small molecule binding 100.0% (2/2) 3.73 0.005654 0.020582
GO:1901363 heterocyclic compound binding 100.0% (2/2) 3.74 0.005579 0.021154
GO:0006310 DNA recombination 50.0% (1/2) 7.2 0.006795 0.021321
GO:0043226 organelle 100.0% (2/2) 3.62 0.006651 0.021616
GO:0043168 anion binding 100.0% (2/2) 3.76 0.005473 0.021653
GO:0000166 nucleotide binding 100.0% (2/2) 3.78 0.005284 0.021857
GO:1901265 nucleoside phosphate binding 100.0% (2/2) 3.78 0.005284 0.021857
GO:0017076 purine nucleotide binding 100.0% (2/2) 3.85 0.004826 0.021958
GO:0097367 carbohydrate derivative binding 100.0% (2/2) 3.88 0.004612 0.02209
GO:0043229 intracellular organelle 100.0% (2/2) 3.62 0.00665 0.022412
GO:0032553 ribonucleotide binding 100.0% (2/2) 3.89 0.004543 0.022968
GO:0004386 helicase activity 50.0% (1/2) 7.02 0.007687 0.023316
GO:0032555 purine ribonucleotide binding 100.0% (2/2) 3.9 0.004469 0.023925
GO:0032508 DNA duplex unwinding 50.0% (1/2) 8.89 0.002112 0.024027
GO:0032392 DNA geometric change 50.0% (1/2) 8.89 0.002112 0.024027
GO:0008094 ATP-dependent activity, acting on DNA 50.0% (1/2) 6.92 0.008234 0.024169
GO:0000725 recombinational repair 50.0% (1/2) 7.96 0.004023 0.024406
GO:0005524 ATP binding 100.0% (2/2) 4.34 0.002431 0.024579
GO:0030554 adenyl nucleotide binding 100.0% (2/2) 3.93 0.004324 0.02459
GO:0043138 3'-5' DNA helicase activity 50.0% (1/2) 9.84 0.001088 0.024752
GO:0071103 DNA conformation change 50.0% (1/2) 8.37 0.003026 0.025036
GO:0035639 purine ribonucleoside triphosphate binding 100.0% (2/2) 4.24 0.002799 0.025472
GO:0032559 adenyl ribonucleotide binding 100.0% (2/2) 3.98 0.004001 0.026004
GO:0051276 chromosome organization 50.0% (1/2) 6.75 0.009291 0.02642
GO:0000724 double-strand break repair via homologous recombination 50.0% (1/2) 8.03 0.003824 0.026766
GO:0003678 DNA helicase activity 50.0% (1/2) 8.13 0.003568 0.027057
GO:0043167 ion binding 100.0% (2/2) 3.28 0.010599 0.029227
GO:0005694 chromosome 50.0% (1/2) 8.93 0.002056 0.031179
GO:0005737 cytoplasm 100.0% (2/2) 4.96 0.001038 0.031492
GO:0016592 mediator complex 50.0% (1/2) 9.17 0.001733 0.031545
GO:0043170 macromolecule metabolic process 100.0% (2/2) 3.2 0.011854 0.031727
GO:0044237 cellular metabolic process 100.0% (2/2) 3.09 0.01375 0.035751
GO:0006268 DNA unwinding involved in DNA replication 50.0% (1/2) 10.31 0.000789 0.035882
GO:0006807 nitrogen compound metabolic process 100.0% (2/2) 3.05 0.014562 0.036809
GO:0006281 DNA repair 50.0% (1/2) 6.0 0.015545 0.037226
GO:0140097 catalytic activity, acting on DNA 50.0% (1/2) 6.0 0.015522 0.038175
GO:0006974 DNA damage response 50.0% (1/2) 5.87 0.01704 0.039761
GO:0044238 primary metabolic process 100.0% (2/2) 2.8 0.020711 0.045968
GO:0097159 organic cyclic compound binding 100.0% (2/2) 2.8 0.020611 0.04689
GO:0043228 non-membrane-bounded organelle 50.0% (1/2) 5.32 0.024835 0.048085
GO:0008152 metabolic process 100.0% (2/2) 2.64 0.025737 0.048793
GO:0043232 intracellular non-membrane-bounded organelle 50.0% (1/2) 5.32 0.024832 0.049124
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms