Coexpression cluster: Cluster_7937 (Co-expression clusters of Hoang et al 2017 (PRJNA356226))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0018105 peptidyl-serine phosphorylation 33.33% (1/3) 7.67 0.004899 0.017479
GO:0018209 peptidyl-serine modification 33.33% (1/3) 7.67 0.004899 0.017479
GO:1902911 protein kinase complex 33.33% (1/3) 7.95 0.004048 0.017812
GO:0016772 transferase activity, transferring phosphorus-containing groups 66.67% (2/3) 3.98 0.005179 0.01799
GO:0035091 phosphatidylinositol binding 33.33% (1/3) 7.71 0.00478 0.018027
GO:0051234 establishment of localization 66.67% (2/3) 4.1 0.004402 0.018156
GO:0006810 transport 66.67% (2/3) 4.17 0.004029 0.018338
GO:0051179 localization 66.67% (2/3) 4.05 0.004732 0.018373
GO:0045944 positive regulation of transcription by RNA polymerase II 33.33% (1/3) 7.52 0.005457 0.018468
GO:0016197 endosomal transport 33.33% (1/3) 7.83 0.004397 0.018721
GO:0043130 ubiquitin binding 33.33% (1/3) 8.39 0.002982 0.018746
GO:0032182 ubiquitin-like protein binding 33.33% (1/3) 8.32 0.003127 0.018761
GO:0098657 import into cell 33.33% (1/3) 7.73 0.00469 0.018762
GO:0005634 nucleus 66.67% (2/3) 4.17 0.004 0.018859
GO:0006793 phosphorus metabolic process 66.67% (2/3) 3.89 0.005913 0.019038
GO:0072665 protein localization to vacuole 33.33% (1/3) 8.74 0.00233 0.019219
GO:0072666 establishment of protein localization to vacuole 33.33% (1/3) 8.74 0.00233 0.019219
GO:0006796 phosphate-containing compound metabolic process 66.67% (2/3) 3.89 0.005846 0.019293
GO:0016773 phosphotransferase activity, alcohol group as acceptor 66.67% (2/3) 4.24 0.003656 0.019302
GO:0016301 kinase activity 66.67% (2/3) 4.18 0.003974 0.019427
GO:0071985 multivesicular body sorting pathway 33.33% (1/3) 9.14 0.001776 0.019538
GO:0032509 endosome transport via multivesicular body sorting pathway 33.33% (1/3) 9.14 0.001776 0.019538
GO:0004672 protein kinase activity 66.67% (2/3) 4.39 0.002967 0.019584
GO:0009987 cellular process 100.0% (3/3) 2.44 0.006253 0.019651
GO:0007034 vacuolar transport 33.33% (1/3) 8.1 0.003645 0.020047
GO:1902554 serine/threonine protein kinase complex 33.33% (1/3) 7.98 0.003964 0.020123
GO:0006468 protein phosphorylation 66.67% (2/3) 4.44 0.002769 0.020304
GO:0016310 phosphorylation 66.67% (2/3) 4.4 0.002941 0.020431
GO:0000307 cyclin-dependent protein kinase holoenzyme complex 33.33% (1/3) 8.55 0.002659 0.020643
GO:0006897 endocytosis 33.33% (1/3) 8.11 0.00361 0.020719
GO:0045324 late endosome to vacuole transport 33.33% (1/3) 8.82 0.00221 0.020837
GO:0036211 protein modification process 66.67% (2/3) 3.75 0.007153 0.020982
GO:0050794 regulation of cellular process 66.67% (2/3) 3.73 0.007367 0.021139
GO:0005524 ATP binding 66.67% (2/3) 3.76 0.007053 0.021159
GO:0005543 phospholipid binding 33.33% (1/3) 7.17 0.006933 0.021283
GO:0140994 RNA polymerase II CTD heptapeptide repeat modifying activity 33.33% (1/3) 9.43 0.001452 0.021297
GO:0032784 regulation of DNA-templated transcription elongation 33.33% (1/3) 8.89 0.002105 0.021376
GO:0050789 regulation of biological process 66.67% (2/3) 3.65 0.008115 0.022317
GO:0032786 positive regulation of DNA-templated transcription, elongation 33.33% (1/3) 9.18 0.001721 0.022722
GO:0035639 purine ribonucleoside triphosphate binding 66.67% (2/3) 3.66 0.008101 0.022753
GO:1902680 positive regulation of RNA biosynthetic process 33.33% (1/3) 6.73 0.009376 0.023352
GO:0045893 positive regulation of DNA-templated transcription 33.33% (1/3) 6.73 0.009376 0.023352
GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway 33.33% (1/3) 9.44 0.001442 0.023794
GO:0065007 biological regulation 66.67% (2/3) 3.55 0.009328 0.024142
GO:0140096 catalytic activity, acting on a protein 66.67% (2/3) 3.56 0.009185 0.024249
GO:0070816 obsolete phosphorylation of RNA polymerase II C-terminal domain 33.33% (1/3) 9.6 0.001292 0.024372
GO:0033365 protein localization to organelle 33.33% (1/3) 6.43 0.011567 0.024627
GO:0034243 regulation of transcription elongation by RNA polymerase II 33.33% (1/3) 9.8 0.001123 0.024702
GO:0043412 macromolecule modification 66.67% (2/3) 3.56 0.009172 0.024708
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 33.33% (1/3) 6.4 0.0118 0.024724
GO:0008289 lipid binding 33.33% (1/3) 6.35 0.012196 0.024768
GO:0030554 adenyl nucleotide binding 66.67% (2/3) 3.34 0.012402 0.024804
GO:0032559 adenyl ribonucleotide binding 66.67% (2/3) 3.4 0.011496 0.024877
GO:0019538 protein metabolic process 66.67% (2/3) 3.36 0.012094 0.024943
GO:0032555 purine ribonucleotide binding 66.67% (2/3) 3.32 0.012811 0.025239
GO:0032553 ribonucleotide binding 66.67% (2/3) 3.31 0.013017 0.025268
GO:0097367 carbohydrate derivative binding 66.67% (2/3) 3.3 0.01321 0.025272
GO:0005488 binding 100.0% (3/3) 2.15 0.01149 0.025278
GO:0043227 membrane-bounded organelle 66.67% (2/3) 3.24 0.014275 0.025463
GO:0010557 positive regulation of macromolecule biosynthetic process 33.33% (1/3) 6.44 0.011478 0.02568
GO:0031328 positive regulation of cellular biosynthetic process 33.33% (1/3) 6.44 0.011478 0.02568
GO:0009891 positive regulation of biosynthetic process 33.33% (1/3) 6.44 0.011478 0.02568
GO:0031325 positive regulation of cellular metabolic process 33.33% (1/3) 6.13 0.01423 0.025731
GO:0018193 peptidyl-amino acid modification 33.33% (1/3) 6.13 0.014185 0.026006
GO:0009893 positive regulation of metabolic process 33.33% (1/3) 5.91 0.016552 0.02601
GO:0017076 purine nucleotide binding 66.67% (2/3) 3.26 0.013807 0.026036
GO:0072594 establishment of protein localization to organelle 33.33% (1/3) 6.54 0.01069 0.026131
GO:0043231 intracellular membrane-bounded organelle 66.67% (2/3) 3.25 0.014067 0.026153
GO:0000166 nucleotide binding 66.67% (2/3) 3.2 0.015084 0.026198
GO:1901265 nucleoside phosphate binding 66.67% (2/3) 3.2 0.015084 0.026198
GO:0036094 small molecule binding 66.67% (2/3) 3.15 0.016113 0.026258
GO:0051173 positive regulation of nitrogen compound metabolic process 33.33% (1/3) 5.93 0.016325 0.026279
GO:0010604 positive regulation of macromolecule metabolic process 33.33% (1/3) 5.91 0.016542 0.026308
GO:0051254 positive regulation of RNA metabolic process 33.33% (1/3) 6.48 0.011171 0.026331
GO:0016192 vesicle-mediated transport 66.67% (2/3) 6.35 0.0002 0.026416
GO:0048522 positive regulation of cellular process 33.33% (1/3) 5.95 0.016068 0.026512
GO:0016740 transferase activity 66.67% (2/3) 3.1 0.017082 0.026527
GO:0061695 transferase complex, transferring phosphorus-containing groups 33.33% (1/3) 6.49 0.011086 0.026608
GO:0006886 intracellular protein transport 33.33% (1/3) 5.96 0.016004 0.026741
GO:0043168 anion binding 66.67% (2/3) 3.17 0.015608 0.026757
GO:1901363 heterocyclic compound binding 66.67% (2/3) 3.16 0.015904 0.026914
GO:0032968 positive regulation of transcription elongation by RNA polymerase II 33.33% (1/3) 9.85 0.001083 0.028589
GO:0043226 organelle 66.67% (2/3) 3.03 0.018868 0.028628
GO:0048518 positive regulation of biological process 33.33% (1/3) 5.69 0.019235 0.028853
GO:1901564 organonitrogen compound metabolic process 66.67% (2/3) 3.01 0.019491 0.028908
GO:0043229 intracellular organelle 66.67% (2/3) 3.03 0.018865 0.028955
GO:0006357 regulation of transcription by RNA polymerase II 33.33% (1/3) 5.65 0.019758 0.028978
GO:0015031 protein transport 33.33% (1/3) 5.62 0.020147 0.029224
GO:0004674 protein serine/threonine kinase activity 66.67% (2/3) 5.75 0.000457 0.030144
GO:0008150 biological_process 100.0% (3/3) 1.85 0.021524 0.030883
GO:0043328 protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway 33.33% (1/3) 9.9 0.001048 0.034584
GO:0045184 establishment of protein localization 33.33% (1/3) 5.32 0.024892 0.03533
GO:0033036 macromolecule localization 33.33% (1/3) 5.15 0.027839 0.037498
GO:0070727 cellular macromolecule localization 33.33% (1/3) 5.16 0.027785 0.037811
GO:0051649 establishment of localization in cell 33.33% (1/3) 5.12 0.028574 0.038098
GO:0008104 protein localization 33.33% (1/3) 5.16 0.027721 0.038117
GO:0046907 intracellular transport 33.33% (1/3) 5.16 0.027628 0.038389
GO:0008353 RNA polymerase II CTD heptapeptide repeat kinase activity 33.33% (1/3) 10.15 0.000878 0.038649
GO:1990234 transferase complex 33.33% (1/3) 5.17 0.027574 0.038722
GO:0043167 ion binding 66.67% (2/3) 2.69 0.029614 0.039091
GO:0043170 macromolecule metabolic process 66.67% (2/3) 2.61 0.032981 0.043104
GO:0071705 nitrogen compound transport 33.33% (1/3) 4.89 0.033365 0.043178
GO:0044237 cellular metabolic process 66.67% (2/3) 2.51 0.038027 0.048733
GO:0051641 cellular localization 33.33% (1/3) 4.65 0.039224 0.049784
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (3) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms