Coexpression cluster: Cluster_978 (Co-expression clusters of Hoang et al 2017 (PRJNA356226))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016242 negative regulation of macroautophagy 6.9% (6/87) 10.58 0.0 0.0
GO:0010507 negative regulation of autophagy 6.9% (6/87) 10.58 0.0 0.0
GO:0031932 TORC2 complex 6.9% (6/87) 9.46 0.0 0.0
GO:0016241 regulation of macroautophagy 6.9% (6/87) 8.95 0.0 0.0
GO:0031330 negative regulation of cellular catabolic process 6.9% (6/87) 8.57 0.0 0.0
GO:0009895 negative regulation of catabolic process 6.9% (6/87) 8.44 0.0 0.0
GO:0038201 TOR complex 6.9% (6/87) 8.02 0.0 0.0
GO:0031931 TORC1 complex 6.9% (6/87) 8.02 0.0 0.0
GO:0031929 TOR signaling 6.9% (6/87) 7.9 0.0 0.0
GO:0010506 regulation of autophagy 6.9% (6/87) 7.39 0.0 0.0
GO:0031329 regulation of cellular catabolic process 6.9% (6/87) 6.06 0.0 0.0
GO:0009894 regulation of catabolic process 6.9% (6/87) 5.16 0.0 1e-06
GO:0035550 urease complex 2.3% (2/87) 11.17 0.0 1e-05
GO:0003674 molecular_function 62.07% (54/87) 0.81 0.0 1.1e-05
GO:0043419 urea catabolic process 2.3% (2/87) 10.75 1e-06 1.7e-05
GO:0009039 urease activity 2.3% (2/87) 10.17 1e-06 3.7e-05
GO:0019627 urea metabolic process 2.3% (2/87) 10.05 2e-06 4.1e-05
GO:0008150 biological_process 51.72% (45/87) 0.89 2e-06 5.2e-05
GO:0035556 intracellular signal transduction 6.9% (6/87) 3.68 8e-06 0.000193
GO:0071941 nitrogen cycle metabolic process 2.3% (2/87) 8.54 1.4e-05 0.000301
GO:0009892 negative regulation of metabolic process 6.9% (6/87) 3.5 1.7e-05 0.000336
GO:0031324 negative regulation of cellular metabolic process 6.9% (6/87) 3.51 1.6e-05 0.000341
GO:0043605 amide catabolic process 2.3% (2/87) 8.29 2e-05 0.000371
GO:0016151 nickel cation binding 2.3% (2/87) 8.2 2.2e-05 0.000406
GO:0007165 signal transduction 9.2% (8/87) 2.69 3.7e-05 0.000651
GO:0004096 catalase activity 2.3% (2/87) 7.73 4.3e-05 0.00072
GO:0008152 metabolic process 33.33% (29/87) 1.06 5.6e-05 0.000905
GO:0048523 negative regulation of cellular process 6.9% (6/87) 3.13 7e-05 0.001096
GO:0048519 negative regulation of biological process 6.9% (6/87) 3.1 7.7e-05 0.001166
GO:0004674 protein serine/threonine kinase activity 8.05% (7/87) 2.7 0.00011 0.001603
GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides 3.45% (3/87) 5.03 0.000115 0.001627
GO:0042542 response to hydrogen peroxide 2.3% (2/87) 6.91 0.000134 0.001835
GO:0140535 intracellular protein-containing complex 6.9% (6/87) 2.94 0.00014 0.001853
GO:0031323 regulation of cellular metabolic process 12.64% (11/87) 1.89 0.000191 0.00246
GO:0019222 regulation of metabolic process 12.64% (11/87) 1.84 0.000251 0.003132
GO:0050794 regulation of cellular process 14.94% (13/87) 1.57 0.000415 0.005038
GO:0071705 nitrogen compound transport 6.9% (6/87) 2.62 0.000469 0.005538
GO:0015171 amino acid transmembrane transporter activity 3.45% (3/87) 4.27 0.000542 0.006238
GO:0006865 amino acid transport 3.45% (3/87) 4.25 0.000563 0.006309
GO:0046943 carboxylic acid transmembrane transporter activity 3.45% (3/87) 4.15 0.000684 0.006951
GO:0005342 organic acid transmembrane transporter activity 3.45% (3/87) 4.15 0.000684 0.006951
GO:0000302 response to reactive oxygen species 2.3% (2/87) 5.75 0.000665 0.007092
GO:0050789 regulation of biological process 14.94% (13/87) 1.5 0.000658 0.007193
GO:1901564 organonitrogen compound metabolic process 19.54% (17/87) 1.24 0.000726 0.007212
GO:0005488 binding 37.93% (33/87) 0.75 0.000881 0.008189
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 3.45% (3/87) 4.03 0.000872 0.008288
GO:0008936 nicotinamidase activity 1.15% (1/87) 10.17 0.000868 0.008433
GO:0044237 cellular metabolic process 24.14% (21/87) 1.04 0.000929 0.008454
GO:0046942 carboxylic acid transport 3.45% (3/87) 3.93 0.001066 0.009319
GO:0015849 organic acid transport 3.45% (3/87) 3.93 0.001066 0.009319
GO:0003824 catalytic activity 32.18% (28/87) 0.83 0.001104 0.00946
GO:0008514 organic anion transmembrane transporter activity 3.45% (3/87) 3.89 0.001146 0.009635
GO:0036211 protein modification process 13.79% (12/87) 1.47 0.001234 0.010175
GO:0065007 biological regulation 14.94% (13/87) 1.39 0.001259 0.010189
GO:0009987 cellular process 32.18% (28/87) 0.8 0.001459 0.01099
GO:0015711 organic anion transport 3.45% (3/87) 3.78 0.001434 0.010994
GO:0071702 organic substance transport 6.9% (6/87) 2.29 0.001503 0.011135
GO:0006468 protein phosphorylation 10.34% (9/87) 1.75 0.001433 0.011181
GO:0019538 protein metabolic process 16.09% (14/87) 1.31 0.00141 0.011203
GO:0033290 eukaryotic 48S preinitiation complex 1.15% (1/87) 9.29 0.001591 0.011591
GO:0006796 phosphate-containing compound metabolic process 12.64% (11/87) 1.5 0.001765 0.012439
GO:0006793 phosphorus metabolic process 12.64% (11/87) 1.49 0.001847 0.012608
GO:0004672 protein kinase activity 10.34% (9/87) 1.7 0.001818 0.012612
GO:0016310 phosphorylation 10.34% (9/87) 1.71 0.001763 0.012633
GO:0006413 translational initiation 2.3% (2/87) 4.9 0.002131 0.014326
GO:0032991 protein-containing complex 12.64% (11/87) 1.45 0.002273 0.014606
GO:0042743 hydrogen peroxide metabolic process 2.3% (2/87) 4.86 0.00224 0.014611
GO:0042744 hydrogen peroxide catabolic process 2.3% (2/87) 4.86 0.00224 0.014611
GO:0071704 organic substance metabolic process 27.59% (24/87) 0.85 0.002337 0.014802
GO:0004438 phosphatidylinositol-3-phosphate phosphatase activity 1.15% (1/87) 8.67 0.002458 0.015347
GO:0016740 transferase activity 17.24% (15/87) 1.15 0.00271 0.016678
GO:0070993 translation preinitiation complex 1.15% (1/87) 8.43 0.002892 0.01755
GO:0072593 reactive oxygen species metabolic process 2.3% (2/87) 4.6 0.003196 0.018874
GO:0006807 nitrogen compound metabolic process 22.99% (20/87) 0.93 0.003184 0.019058
GO:0043412 macromolecule modification 13.79% (12/87) 1.29 0.003514 0.020477
GO:0016773 phosphotransferase activity, alcohol group as acceptor 10.34% (9/87) 1.55 0.003667 0.020543
GO:0003743 translation initiation factor activity 2.3% (2/87) 4.5 0.003658 0.02076
GO:0016772 transferase activity, transferring phosphorus-containing groups 11.49% (10/87) 1.45 0.003651 0.020991
GO:0010035 response to inorganic substance 2.3% (2/87) 4.46 0.003858 0.021341
GO:0017009 protein-phycocyanobilin linkage 1.15% (1/87) 7.85 0.004334 0.023384
GO:0017007 protein-bilin linkage 1.15% (1/87) 7.85 0.004334 0.023384
GO:0046905 15-cis-phytoene synthase activity 1.15% (1/87) 7.75 0.004623 0.024338
GO:0005575 cellular_component 32.18% (28/87) 0.69 0.004969 0.024397
GO:0010033 response to organic substance 3.45% (3/87) 3.18 0.004589 0.024454
GO:0005634 nucleus 10.34% (9/87) 1.48 0.004925 0.024456
GO:0016301 kinase activity 10.34% (9/87) 1.49 0.004819 0.024488
GO:0030970 retrograde protein transport, ER to cytosol 1.15% (1/87) 7.71 0.004767 0.024506
GO:1903513 endoplasmic reticulum to cytosol transport 1.15% (1/87) 7.71 0.004767 0.024506
GO:0032527 protein exit from endoplasmic reticulum 1.15% (1/87) 7.67 0.004911 0.024667
GO:0017006 protein-tetrapyrrole linkage 1.15% (1/87) 7.47 0.005631 0.027341
GO:0005777 peroxisome 2.3% (2/87) 4.08 0.006413 0.03046
GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity 1.15% (1/87) 7.29 0.006351 0.030497
GO:0051238 sequestering of metal ion 1.15% (1/87) 6.97 0.007932 0.033983
GO:0006880 intracellular sequestering of iron ion 1.15% (1/87) 6.97 0.007932 0.033983
GO:0097577 sequestering of iron ion 1.15% (1/87) 6.97 0.007932 0.033983
GO:0043227 membrane-bounded organelle 14.94% (13/87) 1.08 0.008032 0.034077
GO:0071540 eukaryotic translation initiation factor 3 complex, eIF3e 1.15% (1/87) 7.03 0.007645 0.034089
GO:0043614 multi-eIF complex 1.15% (1/87) 7.03 0.007645 0.034089
GO:0019365 pyridine nucleotide salvage 1.15% (1/87) 7.03 0.007645 0.034089
GO:0004337 geranyltranstransferase activity 1.15% (1/87) 7.0 0.007788 0.034379
GO:0005850 eukaryotic translation initiation factor 2 complex 1.15% (1/87) 7.08 0.007357 0.034571
GO:0043231 intracellular membrane-bounded organelle 14.94% (13/87) 1.09 0.007562 0.034785
GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors 1.15% (1/87) 7.05 0.007501 0.034871
GO:1901700 response to oxygen-containing compound 2.3% (2/87) 3.87 0.008493 0.035688
GO:0002188 translation reinitiation 1.15% (1/87) 6.85 0.00865 0.036
GO:0008135 translation factor activity, RNA binding 2.3% (2/87) 3.84 0.008822 0.03603
GO:0090079 translation regulator activity, nucleic acid binding 2.3% (2/87) 3.84 0.008822 0.03603
GO:0042221 response to chemical 3.45% (3/87) 2.82 0.009146 0.037007
GO:0140096 catalytic activity, acting on a protein 12.64% (11/87) 1.16 0.009776 0.039192
GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport 2.3% (2/87) 3.74 0.0101 0.040125
GO:0046914 transition metal ion binding 6.9% (6/87) 1.71 0.010328 0.040662
GO:0043226 organelle 16.09% (14/87) 0.98 0.010636 0.041134
GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m 1.15% (1/87) 6.53 0.010801 0.041403
GO:0043229 intracellular organelle 16.09% (14/87) 0.98 0.010627 0.041466
GO:0009773 photosynthetic electron transport in photosystem I 1.15% (1/87) 6.51 0.010944 0.041587
GO:0045182 translation regulator activity 2.3% (2/87) 3.66 0.011182 0.042125
GO:0006886 intracellular protein transport 3.45% (3/87) 2.68 0.011694 0.042943
GO:0005788 endoplasmic reticulum lumen 1.15% (1/87) 6.43 0.011517 0.043016
GO:0052744 phosphatidylinositol monophosphate phosphatase activity 1.15% (1/87) 6.41 0.01166 0.043181
GO:0043170 macromolecule metabolic process 19.54% (17/87) 0.84 0.012005 0.043717
GO:0001732 formation of cytoplasmic translation initiation complex 1.15% (1/87) 6.34 0.012232 0.044178
GO:0042579 microbody 2.3% (2/87) 3.56 0.012762 0.045712
GO:0006950 response to stress 9.2% (8/87) 1.36 0.012989 0.046147
GO:0003729 mRNA binding 3.45% (3/87) 2.61 0.013303 0.046884
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (87) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms