Coexpression cluster: Cluster_7907 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0140110 transcription regulator activity 60.0% (3/5) 5.23 4e-05 0.00114
GO:0003700 DNA-binding transcription factor activity 60.0% (3/5) 5.48 2.4e-05 0.001352
GO:0009889 regulation of biosynthetic process 60.0% (3/5) 4.25 0.000302 0.001433
GO:0019219 regulation of nucleobase-containing compound metabolic process 60.0% (3/5) 4.55 0.00016 0.001523
GO:0031323 regulation of cellular metabolic process 60.0% (3/5) 4.13 0.00038 0.001549
GO:0031326 regulation of cellular biosynthetic process 60.0% (3/5) 4.25 0.000301 0.00156
GO:0019222 regulation of metabolic process 60.0% (3/5) 4.09 0.000418 0.001587
GO:0051252 regulation of RNA metabolic process 60.0% (3/5) 4.61 0.000143 0.001626
GO:0010556 regulation of macromolecule biosynthetic process 60.0% (3/5) 4.27 0.000286 0.001629
GO:0060255 regulation of macromolecule metabolic process 60.0% (3/5) 4.14 0.000374 0.001638
GO:0080090 regulation of primary metabolic process 60.0% (3/5) 4.36 0.000238 0.001698
GO:0005634 nucleus 60.0% (3/5) 4.02 0.000478 0.001702
GO:2001141 regulation of RNA biosynthetic process 60.0% (3/5) 4.68 0.000123 0.001752
GO:0006355 regulation of DNA-templated transcription 60.0% (3/5) 4.68 0.000123 0.001752
GO:0010468 regulation of gene expression 60.0% (3/5) 4.28 0.00028 0.001774
GO:0051171 regulation of nitrogen compound metabolic process 60.0% (3/5) 4.37 0.000232 0.001887
GO:0050794 regulation of cellular process 60.0% (3/5) 3.57 0.001186 0.003976
GO:0050789 regulation of biological process 60.0% (3/5) 3.5 0.001369 0.004336
GO:0065007 biological regulation 60.0% (3/5) 3.4 0.001684 0.005052
GO:0043227 membrane-bounded organelle 60.0% (3/5) 3.09 0.003165 0.008591
GO:0043231 intracellular membrane-bounded organelle 60.0% (3/5) 3.1 0.003097 0.008827
GO:0043226 organelle 60.0% (3/5) 2.88 0.004782 0.011852
GO:0043229 intracellular organelle 60.0% (3/5) 2.88 0.004781 0.012387
GO:0045944 positive regulation of transcription by RNA polymerase II 20.0% (1/5) 6.78 0.009078 0.02156
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding 20.0% (1/5) 6.52 0.010869 0.024781
GO:0000987 cis-regulatory region sequence-specific DNA binding 20.0% (1/5) 6.43 0.01157 0.025365
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific 20.0% (1/5) 6.29 0.012748 0.026912
GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding 20.0% (1/5) 6.2 0.013547 0.027577
GO:1902680 positive regulation of RNA biosynthetic process 20.0% (1/5) 6.0 0.015578 0.029598
GO:0045893 positive regulation of DNA-templated transcription 20.0% (1/5) 6.0 0.015578 0.029598
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 20.0% (1/5) 5.66 0.019589 0.031902
GO:0031328 positive regulation of cellular biosynthetic process 20.0% (1/5) 5.7 0.019057 0.031948
GO:0010557 positive regulation of macromolecule biosynthetic process 20.0% (1/5) 5.7 0.019057 0.031948
GO:0009891 positive regulation of biosynthetic process 20.0% (1/5) 5.7 0.019057 0.031948
GO:0051254 positive regulation of RNA metabolic process 20.0% (1/5) 5.74 0.018549 0.034105
GO:1990837 sequence-specific double-stranded DNA binding 20.0% (1/5) 5.34 0.024371 0.034728
GO:0001067 transcription regulatory region nucleic acid binding 20.0% (1/5) 5.45 0.022624 0.034853
GO:0000976 transcription cis-regulatory region binding 20.0% (1/5) 5.45 0.022624 0.034853
GO:0031325 positive regulation of cellular metabolic process 20.0% (1/5) 5.39 0.023604 0.035406
GO:0009893 positive regulation of metabolic process 20.0% (1/5) 5.17 0.027434 0.03554
GO:0046983 protein dimerization activity 20.0% (1/5) 5.35 0.024346 0.035583
GO:0010604 positive regulation of macromolecule metabolic process 20.0% (1/5) 5.17 0.027418 0.036345
GO:0051173 positive regulation of nitrogen compound metabolic process 20.0% (1/5) 5.19 0.02706 0.036724
GO:0048522 positive regulation of cellular process 20.0% (1/5) 5.21 0.026637 0.037031
GO:0048518 positive regulation of biological process 20.0% (1/5) 4.95 0.031853 0.040347
GO:0006357 regulation of transcription by RNA polymerase II 20.0% (1/5) 4.91 0.032712 0.040535
GO:0003690 double-stranded DNA binding 20.0% (1/5) 4.77 0.036199 0.043901
GO:0110165 cellular anatomical entity 60.0% (3/5) 1.76 0.041597 0.049397
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (5) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms