Coexpression cluster: Cluster_1438 (Co-expression clusters of Hoang et al 2017 (PRJNA356226))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009691 cytokinin biosynthetic process 1.75% (3/171) 6.6 5e-06 0.003152
GO:0042446 hormone biosynthetic process 1.75% (3/171) 6.22 1e-05 0.00341
GO:0044249 cellular biosynthetic process 9.94% (17/171) 1.72 1.9e-05 0.004294
GO:0009690 cytokinin metabolic process 1.75% (3/171) 5.76 2.6e-05 0.004485
GO:0016831 carboxy-lyase activity 2.34% (4/171) 4.18 8.1e-05 0.004978
GO:0046049 UMP metabolic process 1.17% (2/171) 7.32 7.6e-05 0.005123
GO:0009174 pyrimidine ribonucleoside monophosphate biosynthetic process 1.17% (2/171) 7.32 7.6e-05 0.005123
GO:0009173 pyrimidine ribonucleoside monophosphate metabolic process 1.17% (2/171) 7.32 7.6e-05 0.005123
GO:0006222 UMP biosynthetic process 1.17% (2/171) 7.32 7.6e-05 0.005123
GO:0004590 orotidine-5'-phosphate decarboxylase activity 1.17% (2/171) 7.32 7.6e-05 0.005123
GO:0000054 ribosomal subunit export from nucleus 1.75% (3/171) 5.07 0.000108 0.00525
GO:0033750 ribosome localization 1.75% (3/171) 5.07 0.000108 0.00525
GO:0009058 biosynthetic process 9.94% (17/171) 1.53 0.0001 0.005676
GO:0031503 protein-containing complex localization 1.75% (3/171) 4.96 0.000136 0.006138
GO:0009130 pyrimidine nucleoside monophosphate biosynthetic process 1.17% (2/171) 6.71 0.000176 0.007013
GO:0009129 pyrimidine nucleoside monophosphate metabolic process 1.17% (2/171) 6.71 0.000176 0.007013
GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process 1.17% (2/171) 6.44 0.000257 0.00968
GO:0004588 orotate phosphoribosyltransferase activity 1.17% (2/171) 7.35 7.2e-05 0.009782
GO:0044271 cellular nitrogen compound biosynthetic process 5.85% (10/171) 1.94 0.000323 0.010961
GO:1901566 organonitrogen compound biosynthetic process 5.26% (9/171) 2.08 0.000322 0.01149
GO:0072594 establishment of protein localization to organelle 2.92% (5/171) 3.03 0.000409 0.013216
GO:0016830 carbon-carbon lyase activity 2.34% (4/171) 3.5 0.000476 0.014679
GO:0005844 polysome 1.17% (2/171) 5.92 0.000526 0.015494
GO:0072528 pyrimidine-containing compound biosynthetic process 1.75% (3/171) 4.19 0.000636 0.01598
GO:0008964 phosphoenolpyruvate carboxylase activity 1.17% (2/171) 5.8 0.000619 0.016152
GO:0042445 hormone metabolic process 1.75% (3/171) 4.23 0.000596 0.016158
GO:0033365 protein localization to organelle 2.92% (5/171) 2.92 0.000584 0.016506
GO:0005576 extracellular region 2.34% (4/171) 3.34 0.000712 0.016645
GO:0015977 carbon fixation 1.17% (2/171) 5.7 0.00071 0.017197
GO:0005829 cytosol 5.26% (9/171) 1.89 0.000826 0.018066
GO:0072527 pyrimidine-containing compound metabolic process 1.75% (3/171) 4.07 0.000813 0.018363
GO:0006606 protein import into nucleus 1.75% (3/171) 3.98 0.000974 0.020022
GO:0034504 protein localization to nucleus 1.75% (3/171) 3.98 0.000974 0.020022
GO:0051170 import into nucleus 1.75% (3/171) 3.97 0.001004 0.020022
GO:0010817 regulation of hormone levels 1.75% (3/171) 3.94 0.001065 0.020054
GO:0004611 phosphoenolpyruvate carboxykinase activity 1.17% (2/171) 5.41 0.001056 0.020465
GO:0048366 leaf development 1.17% (2/171) 5.33 0.001187 0.020628
GO:0048827 phyllome development 1.17% (2/171) 5.33 0.001187 0.020628
GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds 1.75% (3/171) 3.86 0.001227 0.020794
GO:0033328 peroxisome membrane targeting sequence binding 0.58% (1/171) 9.78 0.001138 0.020848
GO:0044205 'de novo' UMP biosynthetic process 0.58% (1/171) 9.46 0.001422 0.022955
GO:0051656 establishment of organelle localization 1.75% (3/171) 3.8 0.001403 0.023208
GO:1901576 organic substance biosynthetic process 8.19% (14/171) 1.32 0.001623 0.025593
GO:0009308 amine metabolic process 1.75% (3/171) 3.69 0.001718 0.026472
GO:0051173 positive regulation of nitrogen compound metabolic process 2.92% (5/171) 2.42 0.002655 0.037508
GO:0016573 histone acetylation 1.17% (2/171) 4.64 0.003006 0.037741
GO:0018393 internal peptidyl-lysine acetylation 1.17% (2/171) 4.64 0.003006 0.037741
GO:0018394 peptidyl-lysine acetylation 1.17% (2/171) 4.64 0.003006 0.037741
GO:0006475 internal protein amino acid acetylation 1.17% (2/171) 4.64 0.003006 0.037741
GO:0006412 translation 2.34% (4/171) 2.83 0.002576 0.037967
GO:0002181 cytoplasmic translation 1.17% (2/171) 4.74 0.002641 0.038103
GO:0009893 positive regulation of metabolic process 2.92% (5/171) 2.4 0.002817 0.0382
GO:0004417 hydroxyethylthiazole kinase activity 0.58% (1/171) 8.61 0.002558 0.038543
GO:0003924 GTPase activity 2.34% (4/171) 2.75 0.003136 0.038655
GO:0010604 positive regulation of macromolecule metabolic process 2.92% (5/171) 2.4 0.00281 0.038881
GO:0019856 pyrimidine nucleobase biosynthetic process 1.17% (2/171) 4.57 0.003327 0.040277
GO:0043043 peptide biosynthetic process 2.34% (4/171) 2.71 0.003502 0.041652
GO:0005525 GTP binding 2.34% (4/171) 2.69 0.003636 0.041781
GO:0032561 guanyl ribonucleotide binding 2.34% (4/171) 2.69 0.003636 0.041781
GO:1990904 ribonucleoprotein complex 3.51% (6/171) 2.03 0.003829 0.043267
GO:0019001 guanyl nucleotide binding 2.34% (4/171) 2.65 0.00404 0.044901
GO:0009123 nucleoside monophosphate metabolic process 1.17% (2/171) 4.22 0.00532 0.04624
GO:0048518 positive regulation of biological process 2.92% (5/171) 2.18 0.005308 0.04674
GO:0009218 pyrimidine ribonucleotide metabolic process 1.17% (2/171) 4.22 0.005292 0.047214
GO:0009124 nucleoside monophosphate biosynthetic process 1.17% (2/171) 4.22 0.005292 0.047214
GO:0006206 pyrimidine nucleobase metabolic process 1.17% (2/171) 4.37 0.004331 0.047357
GO:1903313 positive regulation of mRNA metabolic process 1.17% (2/171) 4.3 0.004761 0.047474
GO:0009161 ribonucleoside monophosphate metabolic process 1.17% (2/171) 4.31 0.00471 0.047659
GO:0009894 regulation of catabolic process 1.75% (3/171) 3.19 0.004595 0.047932
GO:0046112 nucleobase biosynthetic process 1.17% (2/171) 4.18 0.005596 0.048023
GO:0043968 histone H2A acetylation 0.58% (1/171) 7.61 0.00511 0.048117
GO:0051741 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity 0.58% (1/171) 7.61 0.00511 0.048117
GO:0009156 ribonucleoside monophosphate biosynthetic process 1.17% (2/171) 4.32 0.004684 0.048117
GO:0045046 protein import into peroxisome membrane 0.58% (1/171) 7.78 0.004543 0.04813
GO:0004455 ketol-acid reductoisomerase activity 0.58% (1/171) 7.78 0.004543 0.04813
GO:0009220 pyrimidine ribonucleotide biosynthetic process 1.17% (2/171) 4.23 0.005265 0.048241
GO:0048046 apoplast 1.17% (2/171) 4.28 0.004918 0.048324
GO:0051168 nuclear export 1.75% (3/171) 3.12 0.005211 0.048396
GO:0051640 organelle localization 1.75% (3/171) 3.04 0.006131 0.048905
GO:0045901 positive regulation of translational elongation 0.58% (1/171) 7.32 0.006242 0.049208
GO:0000268 peroxisome targeting sequence binding 0.58% (1/171) 7.39 0.005959 0.04927
GO:0008113 peptide-methionine (S)-S-oxide reductase activity 0.58% (1/171) 7.39 0.005959 0.04927
GO:0006473 protein acetylation 1.17% (2/171) 4.12 0.006108 0.049304
GO:0065008 regulation of biological quality 2.34% (4/171) 2.55 0.005098 0.049379
GO:0099402 plant organ development 1.17% (2/171) 4.12 0.006079 0.049661
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (171) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms