Coexpression cluster: Cluster_1961 (Co-expression clusters of Hoang et al 2017 (PRJNA356226))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009152 purine ribonucleotide biosynthetic process 4.72% (5/106) 4.98 1e-06 0.000321
GO:0046390 ribose phosphate biosynthetic process 4.72% (5/106) 4.47 4e-06 0.000366
GO:0072522 purine-containing compound biosynthetic process 4.72% (5/106) 4.51 3e-06 0.000399
GO:0009260 ribonucleotide biosynthetic process 4.72% (5/106) 4.52 3e-06 0.000516
GO:0006164 purine nucleotide biosynthetic process 4.72% (5/106) 4.62 2e-06 0.000551
GO:0009165 nucleotide biosynthetic process 4.72% (5/106) 4.06 1.4e-05 0.001006
GO:1901293 nucleoside phosphate biosynthetic process 4.72% (5/106) 4.06 1.4e-05 0.001006
GO:0034033 purine nucleoside bisphosphate biosynthetic process 2.83% (3/106) 5.49 4.6e-05 0.002256
GO:0033866 nucleoside bisphosphate biosynthetic process 2.83% (3/106) 5.49 4.6e-05 0.002256
GO:0034030 ribonucleoside bisphosphate biosynthetic process 2.83% (3/106) 5.49 4.6e-05 0.002256
GO:0009150 purine ribonucleotide metabolic process 4.72% (5/106) 3.64 5.6e-05 0.00253
GO:0004738 pyruvate dehydrogenase activity 1.89% (2/106) 7.38 7e-05 0.002642
GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity 1.89% (2/106) 7.38 7e-05 0.002642
GO:0009259 ribonucleotide metabolic process 4.72% (5/106) 3.44 0.000109 0.003833
GO:1901137 carbohydrate derivative biosynthetic process 4.72% (5/106) 3.37 0.000138 0.004243
GO:0019693 ribose phosphate metabolic process 4.72% (5/106) 3.38 0.000132 0.004324
GO:0006163 purine nucleotide metabolic process 4.72% (5/106) 3.27 0.00019 0.005511
GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor 1.89% (2/106) 6.56 0.000217 0.005946
GO:0072521 purine-containing compound metabolic process 4.72% (5/106) 3.18 0.000253 0.006555
GO:0006753 nucleoside phosphate metabolic process 4.72% (5/106) 3.0 0.000439 0.007731
GO:0015986 proton motive force-driven ATP synthesis 1.89% (2/106) 6.08 0.000424 0.007745
GO:0006754 ATP biosynthetic process 1.89% (2/106) 6.08 0.000424 0.007745
GO:0033875 ribonucleoside bisphosphate metabolic process 2.83% (3/106) 4.46 0.000368 0.007884
GO:0033865 nucleoside bisphosphate metabolic process 2.83% (3/106) 4.46 0.000368 0.007884
GO:0034032 purine nucleoside bisphosphate metabolic process 2.83% (3/106) 4.46 0.000368 0.007884
GO:0006086 acetyl-CoA biosynthetic process from pyruvate 1.89% (2/106) 6.25 0.000334 0.008236
GO:1901564 organonitrogen compound metabolic process 18.87% (20/106) 1.19 0.000419 0.00827
GO:0009117 nucleotide metabolic process 4.72% (5/106) 3.02 0.000419 0.008613
GO:0090407 organophosphate biosynthetic process 4.72% (5/106) 2.95 0.00051 0.008663
GO:0051082 unfolded protein binding 2.83% (3/106) 4.24 0.00057 0.009371
GO:0009535 chloroplast thylakoid membrane 2.83% (3/106) 4.19 0.000633 0.009751
GO:0055035 plastid thylakoid membrane 2.83% (3/106) 4.19 0.000633 0.009751
GO:0055086 nucleobase-containing small molecule metabolic process 4.72% (5/106) 2.79 0.000847 0.010986
GO:0034357 photosynthetic membrane 2.83% (3/106) 4.07 0.000805 0.011024
GO:0042651 thylakoid membrane 2.83% (3/106) 4.07 0.000805 0.011024
GO:0005829 cytosol 6.6% (7/106) 2.22 0.000828 0.011037
GO:0009145 purine nucleoside triphosphate biosynthetic process 1.89% (2/106) 5.62 0.000791 0.011464
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 1.89% (2/106) 5.62 0.000791 0.011464
GO:0006085 acetyl-CoA biosynthetic process 1.89% (2/106) 5.51 0.000918 0.0116
GO:0035384 thioester biosynthetic process 1.89% (2/106) 5.46 0.000985 0.011839
GO:0071616 acyl-CoA biosynthetic process 1.89% (2/106) 5.46 0.000985 0.011839
GO:0006900 vesicle budding from membrane 1.89% (2/106) 5.25 0.001318 0.015473
GO:0006084 acetyl-CoA metabolic process 1.89% (2/106) 5.11 0.001602 0.018362
GO:0019774 proteasome core complex, beta-subunit complex 0.94% (1/106) 9.15 0.001763 0.019748
GO:0042170 plastid membrane 2.83% (3/106) 3.58 0.002128 0.023308
GO:0034654 nucleobase-containing compound biosynthetic process 4.72% (5/106) 2.46 0.002279 0.023903
GO:0005575 cellular_component 32.08% (34/106) 0.68 0.002257 0.024188
GO:1901135 carbohydrate derivative metabolic process 4.72% (5/106) 2.43 0.002507 0.02575
GO:0031968 organelle outer membrane 2.83% (3/106) 3.46 0.002682 0.025926
GO:0009201 ribonucleoside triphosphate biosynthetic process 1.89% (2/106) 4.75 0.002597 0.026125
GO:0009142 nucleoside triphosphate biosynthetic process 1.89% (2/106) 4.73 0.002657 0.0262
GO:0019867 outer membrane 2.83% (3/106) 3.39 0.003074 0.02914
GO:0061024 membrane organization 2.83% (3/106) 3.31 0.003615 0.033624
GO:0030433 ubiquitin-dependent ERAD pathway 1.89% (2/106) 4.42 0.004051 0.034436
GO:0006457 protein folding 2.83% (3/106) 3.25 0.004027 0.034826
GO:0009408 response to heat 1.89% (2/106) 4.4 0.004171 0.034853
GO:0006637 acyl-CoA metabolic process 1.89% (2/106) 4.44 0.003977 0.035014
GO:0035383 thioester metabolic process 1.89% (2/106) 4.44 0.003977 0.035014
GO:0044281 small molecule metabolic process 7.55% (8/106) 1.67 0.003897 0.035574
GO:0031090 organelle membrane 4.72% (5/106) 2.21 0.004752 0.036042
GO:0009628 response to abiotic stimulus 2.83% (3/106) 3.2 0.004419 0.036312
GO:0003674 molecular_function 48.11% (51/106) 0.44 0.004648 0.036376
GO:0019136 deoxynucleoside kinase activity 0.94% (1/106) 7.71 0.004752 0.036604
GO:0110165 cellular anatomical entity 28.3% (30/106) 0.68 0.004634 0.036844
GO:0016020 membrane 13.21% (14/106) 1.13 0.004584 0.037052
GO:0010498 proteasomal protein catabolic process 2.83% (3/106) 3.12 0.005192 0.038781
GO:0036503 ERAD pathway 1.89% (2/106) 4.2 0.00544 0.040031
GO:0009266 response to temperature stimulus 1.89% (2/106) 4.11 0.00616 0.044015
GO:0042910 xenobiotic transmembrane transporter activity 1.89% (2/106) 4.12 0.006088 0.04414
GO:0030163 protein catabolic process 2.83% (3/106) 3.0 0.006566 0.044342
GO:0098552 side of membrane 0.94% (1/106) 7.22 0.006681 0.044512
GO:0098562 cytoplasmic side of membrane 0.94% (1/106) 7.26 0.006506 0.044548
GO:0009898 cytoplasmic side of plasma membrane 0.94% (1/106) 7.26 0.006506 0.044548
GO:0018130 heterocycle biosynthetic process 4.72% (5/106) 2.1 0.006505 0.045815
GO:0070150 mitochondrial glycyl-tRNA aminoacylation 0.94% (1/106) 7.15 0.007032 0.046222
GO:0006807 nitrogen compound metabolic process 20.75% (22/106) 0.78 0.007509 0.046277
GO:0019637 organophosphate metabolic process 4.72% (5/106) 2.05 0.007453 0.046511
GO:0004819 glutamine-tRNA ligase activity 0.94% (1/106) 7.08 0.007382 0.046658
GO:0006425 glutaminyl-tRNA aminoacylation 0.94% (1/106) 7.08 0.007382 0.046658
GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors 1.89% (2/106) 3.93 0.007783 0.04737
GO:0010243 response to organonitrogen compound 1.89% (2/106) 3.98 0.007327 0.047528
GO:0019438 aromatic compound biosynthetic process 4.72% (5/106) 2.03 0.007985 0.048005
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (106) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms