Coexpression cluster: Cluster_841 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006801 superoxide metabolic process 8.54% (7/82) 9.06 0.0 0.0
GO:0016413 O-acetyltransferase activity 9.76% (8/82) 6.5 0.0 0.0
GO:0005794 Golgi apparatus 12.2% (10/82) 4.86 0.0 0.0
GO:0072593 reactive oxygen species metabolic process 8.54% (7/82) 6.49 0.0 0.0
GO:0016407 acetyltransferase activity 9.76% (8/82) 5.51 0.0 0.0
GO:0008374 O-acyltransferase activity 9.76% (8/82) 5.32 0.0 0.0
GO:0005507 copper ion binding 7.32% (6/82) 5.93 0.0 0.0
GO:0009834 plant-type secondary cell wall biogenesis 4.88% (4/82) 6.63 0.0 2e-06
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups 9.76% (8/82) 3.87 0.0 2e-06
GO:0045492 xylan biosynthetic process 4.88% (4/82) 6.69 0.0 2e-06
GO:0046922 peptide-O-fucosyltransferase activity 2.44% (2/82) 10.84 1e-06 8e-06
GO:0036066 protein O-linked fucosylation 2.44% (2/82) 10.84 1e-06 8e-06
GO:0045491 xylan metabolic process 4.88% (4/82) 6.03 1e-06 9e-06
GO:0055028 cortical microtubule 3.66% (3/82) 7.53 1e-06 9e-06
GO:0043413 macromolecule glycosylation 6.1% (5/82) 4.76 1e-06 1.3e-05
GO:0006486 protein glycosylation 6.1% (5/82) 4.76 1e-06 1.3e-05
GO:0070592 cell wall polysaccharide biosynthetic process 4.88% (4/82) 5.7 1e-06 1.4e-05
GO:0010413 glucuronoxylan metabolic process 3.66% (3/82) 7.24 1e-06 1.4e-05
GO:0010417 glucuronoxylan biosynthetic process 3.66% (3/82) 7.24 1e-06 1.4e-05
GO:0070085 glycosylation 6.1% (5/82) 4.67 2e-06 1.7e-05
GO:0010410 hemicellulose metabolic process 4.88% (4/82) 5.44 3e-06 2.3e-05
GO:0050879 multicellular organismal movement 2.44% (2/82) 9.52 3e-06 2.9e-05
GO:0010031 circumnutation 2.44% (2/82) 9.52 3e-06 2.9e-05
GO:0010383 cell wall polysaccharide metabolic process 4.88% (4/82) 5.24 4e-06 3.5e-05
GO:0005881 cytoplasmic microtubule 3.66% (3/82) 6.51 6e-06 4.2e-05
GO:0036065 fucosylation 2.44% (2/82) 9.14 6e-06 4.4e-05
GO:0016746 acyltransferase activity 9.76% (8/82) 3.01 7e-06 5.2e-05
GO:0044036 cell wall macromolecule metabolic process 4.88% (4/82) 5.0 8e-06 5.7e-05
GO:0010005 cortical microtubule, transverse to long axis 2.44% (2/82) 8.67 1.2e-05 7.6e-05
GO:0009832 plant-type cell wall biogenesis 4.88% (4/82) 4.85 1.3e-05 8.1e-05
GO:0071669 plant-type cell wall organization or biogenesis 4.88% (4/82) 4.64 2.3e-05 0.000139
GO:0042546 cell wall biogenesis 4.88% (4/82) 4.61 2.5e-05 0.000146
GO:0016297 acyl-[acyl-carrier-protein] hydrolase activity 2.44% (2/82) 7.71 4.4e-05 0.000254
GO:0000036 acyl carrier activity 2.44% (2/82) 7.36 7.1e-05 0.000367
GO:0044620 ACP phosphopantetheine attachment site binding 2.44% (2/82) 7.36 7.1e-05 0.000367
GO:0140414 phosphopantetheine-dependent carrier activity 2.44% (2/82) 7.36 7.1e-05 0.000367
GO:0051192 prosthetic group binding 2.44% (2/82) 7.36 7.1e-05 0.000367
GO:0006493 protein O-linked glycosylation 2.44% (2/82) 7.24 8.5e-05 0.000414
GO:0000271 polysaccharide biosynthetic process 4.88% (4/82) 4.15 8.4e-05 0.000421
GO:0060560 developmental growth involved in morphogenesis 2.44% (2/82) 7.01 0.000117 0.000544
GO:0009826 unidimensional cell growth 2.44% (2/82) 7.01 0.000117 0.000544
GO:0071554 cell wall organization or biogenesis 4.88% (4/82) 4.0 0.000126 0.000571
GO:0044085 cellular component biogenesis 4.88% (4/82) 3.97 0.000134 0.000591
GO:0048589 developmental growth 2.44% (2/82) 6.77 0.000162 0.0007
GO:0016831 carboxy-lyase activity 3.66% (3/82) 4.82 0.000177 0.000749
GO:0019748 secondary metabolic process 3.66% (3/82) 4.73 0.000215 0.00087
GO:0016049 cell growth 2.44% (2/82) 6.58 0.000211 0.000872
GO:0008417 fucosyltransferase activity 2.44% (2/82) 6.49 0.000239 0.000948
GO:0040007 growth 2.44% (2/82) 6.4 0.00027 0.001045
GO:0016051 carbohydrate biosynthetic process 4.88% (4/82) 3.66 0.000301 0.001142
GO:0005976 polysaccharide metabolic process 4.88% (4/82) 3.56 0.000393 0.001464
GO:0005874 microtubule 3.66% (3/82) 4.3 0.000511 0.001867
GO:0003674 molecular_function 53.66% (44/82) 0.6 0.000528 0.001893
GO:0000902 cell morphogenesis 2.44% (2/82) 5.85 0.000578 0.002033
GO:0099512 supramolecular fiber 3.66% (3/82) 4.17 0.000661 0.002202
GO:0099081 supramolecular polymer 3.66% (3/82) 4.17 0.000661 0.002202
GO:0099513 polymeric cytoskeletal fiber 3.66% (3/82) 4.17 0.000656 0.002266
GO:0016830 carbon-carbon lyase activity 3.66% (3/82) 4.14 0.000692 0.002267
GO:0046872 metal ion binding 10.98% (9/82) 1.84 0.000909 0.002927
GO:0009653 anatomical structure morphogenesis 2.44% (2/82) 5.47 0.000976 0.00309
GO:0043169 cation binding 10.98% (9/82) 1.81 0.001093 0.003405
GO:0016790 thiolester hydrolase activity 2.44% (2/82) 5.36 0.001139 0.00349
GO:0007275 multicellular organism development 2.44% (2/82) 5.23 0.001348 0.004066
GO:0005975 carbohydrate metabolic process 7.32% (6/82) 2.29 0.001481 0.004397
GO:0099080 supramolecular complex 3.66% (3/82) 3.43 0.00281 0.008213
GO:0016757 glycosyltransferase activity 6.1% (5/82) 2.36 0.003061 0.008812
GO:0016460 myosin II complex 1.22% (1/82) 8.32 0.003134 0.008887
GO:0140104 molecular carrier activity 2.44% (2/82) 4.54 0.003437 0.009602
GO:0006633 fatty acid biosynthetic process 2.44% (2/82) 4.12 0.006046 0.016649
GO:0046658 obsolete anchored component of plasma membrane 2.44% (2/82) 4.04 0.006742 0.018299
GO:0046914 transition metal ion binding 7.32% (6/82) 1.8 0.00782 0.020927
GO:0031209 SCAR complex 1.22% (1/82) 6.96 0.008019 0.021162
GO:0072330 monocarboxylic acid biosynthetic process 2.44% (2/82) 3.83 0.008885 0.023125
GO:0016829 lyase activity 3.66% (3/82) 2.8 0.009473 0.024323
GO:0016740 transferase activity 15.85% (13/82) 1.03 0.010244 0.025952
GO:0030832 regulation of actin filament length 1.22% (1/82) 6.54 0.010724 0.026461
GO:0008064 regulation of actin polymerization or depolymerization 1.22% (1/82) 6.54 0.010724 0.026461
GO:0043231 intracellular membrane-bounded organelle 14.63% (12/82) 1.06 0.011785 0.028708
GO:0048870 cell motility 1.22% (1/82) 6.38 0.011938 0.028711
GO:0043227 membrane-bounded organelle 14.63% (12/82) 1.05 0.012454 0.029578
GO:0043622 cortical microtubule organization 1.22% (1/82) 6.24 0.013151 0.030848
GO:0032501 multicellular organismal process 2.44% (2/82) 3.5 0.01379 0.031953
GO:0097435 supramolecular fiber organization 2.44% (2/82) 3.36 0.016549 0.036991
GO:0032535 regulation of cellular component size 1.22% (1/82) 5.92 0.016378 0.037046
GO:0090066 regulation of anatomical structure size 1.22% (1/82) 5.92 0.016378 0.037046
GO:0003824 catalytic activity 28.05% (23/82) 0.63 0.017663 0.038137
GO:0048856 anatomical structure development 2.44% (2/82) 3.32 0.017317 0.038258
GO:0008152 metabolic process 25.61% (21/82) 0.67 0.017567 0.038365
GO:0030865 cortical cytoskeleton organization 1.22% (1/82) 5.59 0.020532 0.043344
GO:0005747 mitochondrial respiratory chain complex I 1.22% (1/82) 5.57 0.020799 0.043426
GO:0009059 macromolecule biosynthetic process 4.88% (4/82) 1.95 0.02042 0.043594
GO:0006631 fatty acid metabolic process 2.44% (2/82) 3.06 0.024187 0.049951
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (82) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms