Coexpression cluster: Cluster_4165 (Co-expression clusters of Correr et al 2020 (PRJEB38368))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0141047 molecular tag activity 4.19% (7/167) 6.46 0.0 0.0
GO:0031386 protein tag activity 4.19% (7/167) 6.46 0.0 0.0
GO:0008150 biological_process 49.7% (83/167) 0.84 0.0 0.0
GO:0005575 cellular_component 39.52% (66/167) 0.98 0.0 1e-06
GO:0044389 ubiquitin-like protein ligase binding 3.59% (6/167) 5.57 0.0 1e-06
GO:0031625 ubiquitin protein ligase binding 3.59% (6/167) 5.6 0.0 1e-06
GO:0006508 proteolysis 8.38% (14/167) 2.57 0.0 1.7e-05
GO:0110165 cellular anatomical entity 32.34% (54/167) 0.87 3e-06 0.00033
GO:0019538 protein metabolic process 16.77% (28/167) 1.37 4e-06 0.000331
GO:0008237 metallopeptidase activity 2.99% (5/167) 4.15 1.1e-05 0.000864
GO:0051603 proteolysis involved in protein catabolic process 4.79% (8/167) 2.92 1.3e-05 0.00097
GO:1901564 organonitrogen compound metabolic process 18.56% (31/167) 1.16 1.9e-05 0.001233
GO:0019941 modification-dependent protein catabolic process 4.19% (7/167) 3.07 2.4e-05 0.001387
GO:0004222 metalloendopeptidase activity 2.4% (4/167) 4.65 2.3e-05 0.001403
GO:0048194 Golgi vesicle budding 1.2% (2/167) 8.01 2.9e-05 0.001437
GO:0043632 modification-dependent macromolecule catabolic process 4.19% (7/167) 3.01 3.2e-05 0.001483
GO:0019899 enzyme binding 3.59% (6/167) 3.39 2.8e-05 0.001486
GO:0006807 nitrogen compound metabolic process 23.35% (39/167) 0.95 3.6e-05 0.001597
GO:0065007 biological regulation 13.77% (23/167) 1.28 8.1e-05 0.003378
GO:0006900 vesicle budding from membrane 1.8% (3/167) 5.18 8.7e-05 0.003449
GO:0005737 cytoplasm 9.58% (16/167) 1.57 0.000112 0.003721
GO:0003674 molecular_function 49.7% (83/167) 0.49 0.0001 0.003774
GO:0043170 macromolecule metabolic process 20.96% (35/167) 0.94 0.000112 0.003859
GO:0043687 post-translational protein modification 5.39% (9/167) 2.29 0.00011 0.003964
GO:0070647 protein modification by small protein conjugation or removal 4.79% (8/167) 2.42 0.000145 0.004604
GO:0016043 cellular component organization 8.38% (14/167) 1.66 0.00016 0.004892
GO:0005634 nucleus 10.18% (17/167) 1.46 0.00017 0.005014
GO:0072319 vesicle uncoating 1.2% (2/167) 6.55 0.000222 0.005511
GO:0072318 clathrin coat disassembly 1.2% (2/167) 6.55 0.000222 0.005511
GO:0043226 organelle 16.77% (28/167) 1.04 0.000212 0.005627
GO:0032446 protein modification by small protein conjugation 4.19% (7/167) 2.56 0.000212 0.005811
GO:0043229 intracellular organelle 16.77% (28/167) 1.04 0.000212 0.006018
GO:0036211 protein modification process 11.98% (20/167) 1.27 0.000258 0.00623
GO:0071586 CAAX-box protein processing 1.2% (2/167) 6.37 0.000283 0.006431
GO:0043231 intracellular membrane-bounded organelle 14.97% (25/167) 1.09 0.000276 0.00647
GO:0032991 protein-containing complex 11.38% (19/167) 1.3 0.000295 0.006514
GO:0043227 membrane-bounded organelle 14.97% (25/167) 1.08 0.000309 0.006652
GO:0006397 mRNA processing 2.99% (5/167) 3.08 0.000354 0.007425
GO:0080090 regulation of primary metabolic process 8.38% (14/167) 1.52 0.000431 0.008801
GO:0071840 cellular component organization or biogenesis 8.38% (14/167) 1.51 0.000476 0.009463
GO:0050789 regulation of biological process 11.98% (20/167) 1.18 0.000582 0.0113
GO:0031323 regulation of cellular metabolic process 8.98% (15/167) 1.39 0.000676 0.012221
GO:0044238 primary metabolic process 23.95% (40/167) 0.73 0.0007 0.01239
GO:0008233 peptidase activity 4.79% (8/167) 2.09 0.000672 0.012445
GO:0004175 endopeptidase activity 3.59% (6/167) 2.54 0.000664 0.012578
GO:0050794 regulation of cellular process 11.38% (19/167) 1.17 0.000822 0.014224
GO:0009057 macromolecule catabolic process 4.19% (7/167) 2.21 0.000886 0.015003
GO:0019222 regulation of metabolic process 8.98% (15/167) 1.35 0.000928 0.015383
GO:0016567 protein ubiquitination 3.59% (6/167) 2.42 0.001005 0.016328
GO:0009056 catabolic process 5.99% (10/167) 1.72 0.001028 0.016372
GO:0017069 snRNA binding 1.2% (2/167) 5.29 0.00125 0.017771
GO:0006897 endocytosis 1.8% (3/167) 3.9 0.001146 0.017891
GO:0043412 macromolecule modification 11.98% (20/167) 1.09 0.001243 0.017985
GO:0071704 organic substance metabolic process 24.55% (41/167) 0.68 0.001201 0.018038
GO:0031011 Ino80 complex 1.2% (2/167) 5.33 0.001184 0.018125
GO:0051171 regulation of nitrogen compound metabolic process 7.78% (13/167) 1.43 0.001238 0.018246
GO:0019219 regulation of nucleobase-containing compound metabolic process 7.19% (12/167) 1.49 0.001312 0.018316
GO:0032447 protein urmylation 0.6% (1/167) 9.49 0.001389 0.018736
GO:0009987 cellular process 28.14% (47/167) 0.61 0.001388 0.019043
GO:0061024 membrane organization 2.4% (4/167) 3.07 0.001438 0.019078
GO:0031976 plastid thylakoid 1.2% (2/167) 5.07 0.001683 0.020612
GO:0009534 chloroplast thylakoid 1.2% (2/167) 5.07 0.001683 0.020612
GO:0016050 vesicle organization 1.8% (3/167) 3.73 0.001589 0.020738
GO:0005515 protein binding 14.37% (24/167) 0.94 0.001615 0.02074
GO:0008152 metabolic process 25.15% (42/167) 0.65 0.001652 0.020878
GO:0060255 regulation of macromolecule metabolic process 8.38% (14/167) 1.3 0.001831 0.022078
GO:0006355 regulation of DNA-templated transcription 6.59% (11/167) 1.5 0.002034 0.023814
GO:2001141 regulation of RNA biosynthetic process 6.59% (11/167) 1.5 0.002034 0.023814
GO:0097346 INO80-type complex 1.2% (2/167) 4.86 0.002248 0.025933
GO:0098657 import into cell 1.8% (3/167) 3.52 0.002411 0.027415
GO:0072583 clathrin-dependent endocytosis 1.2% (2/167) 4.79 0.002466 0.027645
GO:0009889 regulation of biosynthetic process 7.78% (13/167) 1.3 0.002689 0.028536
GO:0031326 regulation of cellular biosynthetic process 7.78% (13/167) 1.3 0.002672 0.028742
GO:1901575 organic substance catabolic process 5.39% (9/167) 1.64 0.002638 0.028762
GO:0051261 protein depolymerization 1.2% (2/167) 4.75 0.002616 0.028926
GO:0016071 mRNA metabolic process 2.99% (5/167) 2.37 0.003013 0.031145
GO:0051252 regulation of RNA metabolic process 6.59% (11/167) 1.42 0.002977 0.031183
GO:0006605 protein targeting 1.8% (3/167) 3.36 0.003278 0.033447
GO:0140326 ATPase-coupled intramembrane lipid transporter activity 1.2% (2/167) 4.54 0.003454 0.034803
GO:0004176 ATP-dependent peptidase activity 1.2% (2/167) 4.52 0.003564 0.035459
GO:0045332 phospholipid translocation 1.2% (2/167) 4.49 0.00372 0.03611
GO:0140303 intramembrane lipid transporter activity 1.2% (2/167) 4.5 0.003675 0.036114
GO:0034204 lipid translocation 1.2% (2/167) 4.4 0.004207 0.039868
GO:0006898 receptor-mediated endocytosis 1.2% (2/167) 4.4 0.004207 0.039868
GO:0070603 SWI/SNF superfamily-type complex 1.2% (2/167) 4.38 0.004279 0.040073
GO:0030276 clathrin binding 1.2% (2/167) 4.35 0.004474 0.041407
GO:0097035 regulation of membrane lipid distribution 1.2% (2/167) 4.31 0.004697 0.042012
GO:0000398 mRNA splicing, via spliceosome 1.8% (3/167) 3.19 0.004597 0.042058
GO:0031982 vesicle 2.4% (4/167) 2.59 0.004664 0.042191
GO:0009579 thylakoid 1.2% (2/167) 4.26 0.005055 0.044712
GO:0015914 phospholipid transport 1.2% (2/167) 4.24 0.005213 0.045595
GO:0006357 regulation of transcription by RNA polymerase II 2.99% (5/167) 2.18 0.005377 0.046019
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 1.8% (3/167) 3.11 0.005337 0.046176
GO:0061927 TOC-TIC supercomplex I 0.6% (1/167) 7.49 0.005543 0.046943
GO:0071561 nucleus-vacuole junction 0.6% (1/167) 7.42 0.00582 0.048764
GO:0010468 regulation of gene expression 7.19% (12/167) 1.22 0.005947 0.049308
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (167) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms