Coexpression cluster: Cluster_3752 (Co-expression clusters of Correr et al 2020 (PRJEB38368))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005575 cellular_component 43.17% (60/139) 1.11 0.0 0.0
GO:0006082 organic acid metabolic process 10.79% (15/139) 2.88 0.0 0.0
GO:0044281 small molecule metabolic process 13.67% (19/139) 2.52 0.0 0.0
GO:0016053 organic acid biosynthetic process 7.19% (10/139) 3.79 0.0 0.0
GO:0046394 carboxylic acid biosynthetic process 7.19% (10/139) 3.79 0.0 0.0
GO:0043436 oxoacid metabolic process 10.79% (15/139) 2.89 0.0 0.0
GO:0019752 carboxylic acid metabolic process 10.79% (15/139) 2.89 0.0 1e-06
GO:0110165 cellular anatomical entity 38.13% (53/139) 1.11 0.0 1e-06
GO:0044283 small molecule biosynthetic process 7.91% (11/139) 3.36 0.0 1e-06
GO:0008150 biological_process 49.64% (69/139) 0.84 0.0 3e-06
GO:0008152 metabolic process 34.53% (48/139) 1.11 0.0 5e-06
GO:0009438 methylglyoxal metabolic process 2.16% (3/139) 7.96 0.0 1.1e-05
GO:0042182 ketone catabolic process 2.16% (3/139) 7.96 0.0 1.1e-05
GO:0051596 methylglyoxal catabolic process 2.16% (3/139) 7.96 0.0 1.1e-05
GO:0061727 methylglyoxal catabolic process to lactate 2.16% (3/139) 7.96 0.0 1.1e-05
GO:0004462 lactoylglutathione lyase activity 2.16% (3/139) 7.96 0.0 1.1e-05
GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione 2.16% (3/139) 7.96 0.0 1.1e-05
GO:1901566 organonitrogen compound biosynthetic process 8.63% (12/139) 2.8 0.0 1.3e-05
GO:0071704 organic substance metabolic process 31.65% (44/139) 1.05 1e-06 4e-05
GO:0006089 lactate metabolic process 2.16% (3/139) 7.08 2e-06 6.2e-05
GO:1901607 alpha-amino acid biosynthetic process 4.32% (6/139) 4.07 2e-06 6.7e-05
GO:0032787 monocarboxylic acid metabolic process 5.76% (8/139) 3.27 2e-06 7.3e-05
GO:0005737 cytoplasm 12.23% (17/139) 1.92 3e-06 8.9e-05
GO:0008652 amino acid biosynthetic process 4.32% (6/139) 3.96 3e-06 9.1e-05
GO:0044238 primary metabolic process 29.5% (41/139) 1.04 4e-06 0.000107
GO:0044272 sulfur compound biosynthetic process 3.6% (5/139) 4.45 4e-06 0.000112
GO:0019202 amino acid kinase activity 2.16% (3/139) 6.64 4e-06 0.000115
GO:1901575 organic substance catabolic process 8.63% (12/139) 2.32 6e-06 0.000159
GO:0006807 nitrogen compound metabolic process 25.9% (36/139) 1.1 6e-06 0.000161
GO:0016846 carbon-sulfur lyase activity 2.16% (3/139) 6.35 8e-06 0.000189
GO:1901564 organonitrogen compound metabolic process 20.14% (28/139) 1.28 1e-05 0.000226
GO:0009056 catabolic process 8.63% (12/139) 2.25 1e-05 0.000228
GO:0004349 glutamate 5-kinase activity 1.44% (2/139) 8.49 1.5e-05 0.000314
GO:0006520 amino acid metabolic process 5.76% (8/139) 2.9 1.4e-05 0.000317
GO:0046185 aldehyde catabolic process 2.16% (3/139) 5.91 1.9e-05 0.000404
GO:1901605 alpha-amino acid metabolic process 4.32% (6/139) 3.4 2.7e-05 0.000539
GO:0006007 glucose catabolic process 1.44% (2/139) 8.03 2.8e-05 0.000552
GO:0004619 phosphoglycerate mutase activity 1.44% (2/139) 7.83 3.7e-05 0.000662
GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity 1.44% (2/139) 7.83 3.7e-05 0.000662
GO:0006561 proline biosynthetic process 1.44% (2/139) 7.87 3.5e-05 0.000677
GO:0003878 ATP citrate synthase activity 1.44% (2/139) 7.79 3.9e-05 0.000681
GO:0003824 catalytic activity 32.37% (45/139) 0.84 3.7e-05 0.000687
GO:0016774 phosphotransferase activity, carboxyl group as acceptor 2.16% (3/139) 5.54 4.1e-05 0.000696
GO:0003674 molecular_function 51.8% (72/139) 0.55 5.3e-05 0.000853
GO:0044262 obsolete cellular carbohydrate metabolic process 1.44% (2/139) 7.59 5.2e-05 0.000868
GO:0009987 cellular process 32.37% (45/139) 0.81 5.7e-05 0.000887
GO:0044237 cellular metabolic process 23.74% (33/139) 1.02 5.6e-05 0.000892
GO:0004350 glutamate-5-semialdehyde dehydrogenase activity 1.44% (2/139) 7.46 6.2e-05 0.000925
GO:0009084 glutamine family amino acid biosynthetic process 2.16% (3/139) 5.35 6.2e-05 0.000937
GO:0003867 4-aminobutyrate transaminase activity 1.44% (2/139) 7.3 7.8e-05 0.001144
GO:0009058 biosynthetic process 10.79% (15/139) 1.64 0.000101 0.001442
GO:0072330 monocarboxylic acid biosynthetic process 2.88% (4/139) 4.07 0.000106 0.001489
GO:0006560 proline metabolic process 1.44% (2/139) 6.93 0.000131 0.001802
GO:0006790 sulfur compound metabolic process 3.6% (5/139) 3.37 0.000137 0.001858
GO:0009448 gamma-aminobutyric acid metabolic process 1.44% (2/139) 6.81 0.000154 0.002042
GO:0004015 adenosylmethionine-8-amino-7-oxononanoate transaminase activity 1.44% (2/139) 6.72 0.000174 0.002275
GO:0044282 small molecule catabolic process 3.6% (5/139) 3.28 0.000184 0.002323
GO:0005829 cytosol 6.47% (9/139) 2.19 0.000182 0.002333
GO:0042180 cellular ketone metabolic process 2.16% (3/139) 4.71 0.000225 0.00279
GO:0009064 glutamine family amino acid metabolic process 2.16% (3/139) 4.64 0.000259 0.00315
GO:0006081 cellular aldehyde metabolic process 2.16% (3/139) 4.61 0.000275 0.003293
GO:0044249 cellular biosynthetic process 9.35% (13/139) 1.63 0.000319 0.003698
GO:0006767 water-soluble vitamin metabolic process 2.16% (3/139) 4.54 0.000314 0.003705
GO:0006768 biotin metabolic process 1.44% (2/139) 6.26 0.000331 0.003717
GO:0009102 biotin biosynthetic process 1.44% (2/139) 6.26 0.000331 0.003717
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor 2.16% (3/139) 4.38 0.000435 0.004821
GO:0006766 vitamin metabolic process 2.16% (3/139) 4.33 0.000484 0.005276
GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer 1.44% (2/139) 5.9 0.000543 0.005833
GO:1901576 organic substance biosynthetic process 9.35% (13/139) 1.51 0.000697 0.00738
GO:0016311 dephosphorylation 2.88% (4/139) 3.34 0.000708 0.007393
GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors 2.16% (3/139) 4.13 0.000725 0.007462
GO:0016868 intramolecular phosphotransferase activity 1.44% (2/139) 5.64 0.00077 0.007818
GO:0043226 organelle 16.55% (23/139) 1.02 0.000892 0.008691
GO:0005488 binding 34.53% (48/139) 0.61 0.000868 0.008696
GO:0043229 intracellular organelle 16.55% (23/139) 1.02 0.00089 0.008796
GO:0018130 heterocycle biosynthetic process 5.04% (7/139) 2.2 0.000936 0.008887
GO:0000444 MIS12/MIND type complex 0.72% (1/139) 10.08 0.000925 0.008896
GO:0070279 vitamin B6 binding 2.16% (3/139) 3.95 0.001031 0.009542
GO:0030170 pyridoxal phosphate binding 2.16% (3/139) 3.95 0.001031 0.009542
GO:0005838 proteasome regulatory particle 0.72% (1/139) 9.76 0.001156 0.010433
GO:0048608 reproductive structure development 1.44% (2/139) 5.35 0.001151 0.010515
GO:0031593 polyubiquitin modification-dependent protein binding 1.44% (2/139) 5.33 0.001183 0.010547
GO:0009152 purine ribonucleotide biosynthetic process 2.16% (3/139) 3.86 0.001244 0.010959
GO:0019320 hexose catabolic process 1.44% (2/139) 5.27 0.001283 0.011032
GO:0046365 monosaccharide catabolic process 1.44% (2/139) 5.27 0.001283 0.011032
GO:1903292 protein localization to Golgi membrane 0.72% (1/139) 9.49 0.001387 0.011654
GO:0044271 cellular nitrogen compound biosynthetic process 5.76% (8/139) 1.92 0.001381 0.011741
GO:0043169 cation binding 8.63% (12/139) 1.46 0.001524 0.012661
GO:0006085 acetyl-CoA biosynthetic process 1.44% (2/139) 5.12 0.001567 0.012873
GO:0030145 manganese ion binding 1.44% (2/139) 5.1 0.001617 0.013137
GO:0071616 acyl-CoA biosynthetic process 1.44% (2/139) 5.07 0.001681 0.013357
GO:0035384 thioester biosynthetic process 1.44% (2/139) 5.07 0.001681 0.013357
GO:0140030 modification-dependent protein binding 1.44% (2/139) 5.05 0.001733 0.013621
GO:0046483 heterocycle metabolic process 11.51% (16/139) 1.19 0.001777 0.013822
GO:0019842 vitamin binding 2.16% (3/139) 3.63 0.001937 0.014746
GO:1901615 organic hydroxy compound metabolic process 2.88% (4/139) 2.95 0.001921 0.01478
GO:0043167 ion binding 18.71% (26/139) 0.86 0.001975 0.014886
GO:0051603 proteolysis involved in protein catabolic process 3.6% (5/139) 2.51 0.002033 0.015008
GO:0009150 purine ribonucleotide metabolic process 2.88% (4/139) 2.93 0.002015 0.015031
GO:1901362 organic cyclic compound biosynthetic process 5.04% (7/139) 1.97 0.00223 0.016299
GO:0006164 purine nucleotide biosynthetic process 2.16% (3/139) 3.49 0.002548 0.018257
GO:0005951 carbamoyl-phosphate synthase complex 0.72% (1/139) 8.62 0.002541 0.018394
GO:0006084 acetyl-CoA metabolic process 1.44% (2/139) 4.72 0.002727 0.019357
GO:0055086 nucleobase-containing small molecule metabolic process 3.6% (5/139) 2.4 0.002794 0.019455
GO:0046570 methylthioribulose 1-phosphate dehydratase activity 0.72% (1/139) 8.49 0.002772 0.019485
GO:1901360 organic cyclic compound metabolic process 11.51% (16/139) 1.12 0.002973 0.020505
GO:0009260 ribonucleotide biosynthetic process 2.16% (3/139) 3.39 0.003102 0.021191
GO:0072522 purine-containing compound biosynthetic process 2.16% (3/139) 3.38 0.003158 0.021376
GO:0034641 cellular nitrogen compound metabolic process 11.51% (16/139) 1.11 0.003216 0.021569
GO:0009259 ribonucleotide metabolic process 2.88% (4/139) 2.73 0.003332 0.022141
GO:1905368 peptidase complex 1.44% (2/139) 4.55 0.003429 0.022384
GO:0046390 ribose phosphate biosynthetic process 2.16% (3/139) 3.34 0.003419 0.022519
GO:0034033 purine nucleoside bisphosphate biosynthetic process 1.44% (2/139) 4.51 0.003594 0.022647
GO:0034030 ribonucleoside bisphosphate biosynthetic process 1.44% (2/139) 4.51 0.003594 0.022647
GO:0033866 nucleoside bisphosphate biosynthetic process 1.44% (2/139) 4.51 0.003594 0.022647
GO:0009791 post-embryonic development 1.44% (2/139) 4.53 0.003502 0.022655
GO:0042788 polysomal ribosome 0.72% (1/139) 8.08 0.003695 0.022888
GO:0005996 monosaccharide metabolic process 2.16% (3/139) 3.3 0.00367 0.022932
GO:0046872 metal ion binding 7.91% (11/139) 1.37 0.003768 0.023149
GO:0019693 ribose phosphate metabolic process 2.88% (4/139) 2.67 0.003849 0.023448
GO:0004438 phosphatidylinositol-3-phosphate phosphatase activity 0.72% (1/139) 7.99 0.003925 0.023712
GO:0043231 intracellular membrane-bounded organelle 13.67% (19/139) 0.96 0.004013 0.024043
GO:0070037 rRNA (pseudouridine) methyltransferase activity 0.72% (1/139) 7.83 0.004386 0.025444
GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity 0.72% (1/139) 7.83 0.004386 0.025444
GO:0043604 amide biosynthetic process 2.88% (4/139) 2.62 0.004375 0.025791
GO:0043227 membrane-bounded organelle 13.67% (19/139) 0.95 0.004349 0.025845
GO:0006099 tricarboxylic acid cycle 1.44% (2/139) 4.31 0.004717 0.02715
GO:0006163 purine nucleotide metabolic process 2.88% (4/139) 2.55 0.00509 0.02907
GO:0032991 protein-containing complex 10.07% (14/139) 1.12 0.005316 0.029664
GO:0009070 serine family amino acid biosynthetic process 1.44% (2/139) 4.21 0.005365 0.029709
GO:0009067 aspartate family amino acid biosynthetic process 1.44% (2/139) 4.2 0.005454 0.029753
GO:0042364 water-soluble vitamin biosynthetic process 1.44% (2/139) 4.23 0.005254 0.029773
GO:0000940 outer kinetochore 0.72% (1/139) 7.55 0.005307 0.02984
GO:0019941 modification-dependent protein catabolic process 2.88% (4/139) 2.53 0.005435 0.02987
GO:0034067 protein localization to Golgi apparatus 0.72% (1/139) 7.49 0.005537 0.029981
GO:0005634 nucleus 8.63% (12/139) 1.22 0.005678 0.030519
GO:0005854 nascent polypeptide-associated complex 0.72% (1/139) 7.43 0.005767 0.03077
GO:0003006 developmental process involved in reproduction 1.44% (2/139) 4.12 0.006098 0.032303
GO:0072521 purine-containing compound metabolic process 2.88% (4/139) 2.46 0.006314 0.032969
GO:0043632 modification-dependent macromolecule catabolic process 2.88% (4/139) 2.47 0.006273 0.032987
GO:0016829 lyase activity 2.88% (4/139) 2.45 0.006504 0.033717
GO:0140102 catalytic activity, acting on a rRNA 1.44% (2/139) 4.04 0.006751 0.034269
GO:0006637 acyl-CoA metabolic process 1.44% (2/139) 4.04 0.006726 0.034382
GO:0035383 thioester metabolic process 1.44% (2/139) 4.04 0.006726 0.034382
GO:0009069 serine family amino acid metabolic process 1.44% (2/139) 3.97 0.007433 0.036714
GO:0009165 nucleotide biosynthetic process 2.16% (3/139) 2.93 0.007404 0.036819
GO:1901293 nucleoside phosphate biosynthetic process 2.16% (3/139) 2.93 0.007404 0.036819
GO:0009110 vitamin biosynthetic process 1.44% (2/139) 3.97 0.007382 0.037214
GO:0005460 UDP-glucose transmembrane transporter activity 0.72% (1/139) 7.03 0.007605 0.037311
GO:0031053 primary miRNA processing 0.72% (1/139) 6.99 0.007835 0.038181
GO:0072528 pyrimidine-containing compound biosynthetic process 1.44% (2/139) 3.91 0.008065 0.039044
GO:0045174 glutathione dehydrogenase (ascorbate) activity 0.72% (1/139) 6.83 0.008752 0.040494
GO:0033355 ascorbate glutathione cycle 0.72% (1/139) 6.83 0.008752 0.040494
GO:0006564 L-serine biosynthetic process 0.72% (1/139) 6.83 0.008752 0.040494
GO:0016672 oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor 0.72% (1/139) 6.83 0.008752 0.040494
GO:0009057 macromolecule catabolic process 3.6% (5/139) 1.99 0.00894 0.0411
GO:0016769 transferase activity, transferring nitrogenous groups 1.44% (2/139) 3.86 0.008609 0.041134
GO:0008483 transaminase activity 1.44% (2/139) 3.86 0.008609 0.041134
GO:0009066 aspartate family amino acid metabolic process 1.44% (2/139) 3.85 0.008748 0.041525
GO:0009117 nucleotide metabolic process 2.88% (4/139) 2.3 0.009245 0.041975
GO:0042803 protein homodimerization activity 0.72% (1/139) 6.76 0.009211 0.042083
GO:0072527 pyrimidine-containing compound metabolic process 1.44% (2/139) 3.79 0.009485 0.042799
GO:0006753 nucleoside phosphate metabolic process 2.88% (4/139) 2.29 0.00957 0.042918
GO:0000814 ESCRT II complex 0.72% (1/139) 6.65 0.009898 0.04412
GO:0006228 UTP biosynthetic process 0.72% (1/139) 6.62 0.010127 0.044597
GO:0046051 UTP metabolic process 0.72% (1/139) 6.62 0.010127 0.044597
GO:0019852 L-ascorbic acid metabolic process 0.72% (1/139) 6.59 0.010356 0.045333
GO:0000502 proteasome complex 0.72% (1/139) 6.55 0.010585 0.046059
GO:0008452 RNA ligase activity 0.72% (1/139) 6.49 0.011043 0.046129
GO:0003972 RNA ligase (ATP) activity 0.72% (1/139) 6.49 0.011043 0.046129
GO:0098869 cellular oxidant detoxification 0.72% (1/139) 6.49 0.011043 0.046129
GO:0046695 SLIK (SAGA-like) complex 0.72% (1/139) 6.49 0.011043 0.046129
GO:0006006 glucose metabolic process 1.44% (2/139) 3.69 0.010792 0.046682
GO:0080134 regulation of response to stress 1.44% (2/139) 3.68 0.010884 0.046802
GO:0016052 carbohydrate catabolic process 2.16% (3/139) 2.72 0.011041 0.047199
GO:0003682 chromatin binding 2.16% (3/139) 2.68 0.01179 0.04897
GO:0004482 mRNA 5'-cap (guanine-N7-)-methyltransferase activity 0.72% (1/139) 6.38 0.011958 0.049108
GO:0043603 amide metabolic process 2.88% (4/139) 2.19 0.011907 0.049176
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (139) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms