Coexpression cluster: Cluster_4325 (Co-expression clusters of Correr et al 2020 (PRJEB38368))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0080090 regulation of primary metabolic process 9.55% (21/220) 1.71 3e-06 0.000264
GO:0060255 regulation of macromolecule metabolic process 10.45% (23/220) 1.62 2e-06 0.000272
GO:0043632 modification-dependent macromolecule catabolic process 4.09% (9/220) 2.97 3e-06 0.000274
GO:0051171 regulation of nitrogen compound metabolic process 9.55% (21/220) 1.72 2e-06 0.000305
GO:0019222 regulation of metabolic process 10.45% (23/220) 1.57 4e-06 0.000321
GO:0006508 proteolysis 6.36% (14/220) 2.17 4e-06 0.000335
GO:0010498 proteasomal protein catabolic process 3.64% (8/220) 3.48 1e-06 0.000342
GO:0019941 modification-dependent protein catabolic process 4.09% (9/220) 3.03 2e-06 0.000354
GO:0003674 molecular_function 51.82% (114/220) 0.55 0.0 0.000359
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process 3.18% (7/220) 3.43 5e-06 0.00036
GO:0008150 biological_process 41.82% (92/220) 0.59 6e-06 0.000365
GO:0019538 protein metabolic process 15.0% (33/220) 1.21 7e-06 0.000371
GO:0051603 proteolysis involved in protein catabolic process 4.55% (10/220) 2.84 2e-06 0.000387
GO:0009057 macromolecule catabolic process 5.0% (11/220) 2.47 7e-06 0.000396
GO:0030163 protein catabolic process 3.64% (8/220) 3.36 2e-06 0.000429
GO:0006511 ubiquitin-dependent protein catabolic process 3.64% (8/220) 3.0 9e-06 0.000483
GO:0005575 cellular_component 32.27% (71/220) 0.69 1.2e-05 0.000596
GO:0140110 transcription regulator activity 6.36% (14/220) 1.99 1.6e-05 0.000724
GO:0050789 regulation of biological process 12.73% (28/220) 1.27 1.8e-05 0.000748
GO:0019219 regulation of nucleobase-containing compound metabolic process 8.18% (18/220) 1.68 1.8e-05 0.000776
GO:0050794 regulation of cellular process 12.27% (27/220) 1.28 2e-05 0.000815
GO:0065007 biological regulation 13.18% (29/220) 1.21 2.4e-05 0.000916
GO:0031323 regulation of cellular metabolic process 9.55% (21/220) 1.48 2.7e-05 0.000976
GO:0051252 regulation of RNA metabolic process 7.73% (17/220) 1.65 3.8e-05 0.001314
GO:0043170 macromolecule metabolic process 20.0% (44/220) 0.88 5.3e-05 0.001779
GO:1901564 organonitrogen compound metabolic process 16.36% (36/220) 0.98 7e-05 0.00218
GO:0006807 nitrogen compound metabolic process 21.36% (47/220) 0.82 6.9e-05 0.002224
GO:0140535 intracellular protein-containing complex 4.09% (9/220) 2.19 0.000192 0.005554
GO:0010468 regulation of gene expression 8.18% (18/220) 1.41 0.000189 0.00567
GO:0010556 regulation of macromolecule biosynthetic process 8.18% (18/220) 1.4 0.000205 0.005742
GO:0008152 metabolic process 25.45% (56/220) 0.67 0.000231 0.006064
GO:0032991 protein-containing complex 10.45% (23/220) 1.18 0.000257 0.006173
GO:0003712 transcription coregulator activity 2.27% (5/220) 3.22 0.00023 0.006224
GO:0007033 vacuole organization 1.36% (3/220) 4.62 0.00027 0.0063
GO:0009889 regulation of biosynthetic process 8.18% (18/220) 1.37 0.000256 0.00632
GO:0031326 regulation of cellular biosynthetic process 8.18% (18/220) 1.37 0.000254 0.006455
GO:0005488 binding 32.73% (72/220) 0.54 0.000351 0.00757
GO:1901565 organonitrogen compound catabolic process 3.64% (8/220) 2.24 0.000343 0.007592
GO:0044238 primary metabolic process 23.18% (51/220) 0.69 0.000335 0.007609
GO:0042543 protein N-linked glycosylation via arginine 0.45% (1/220) 11.42 0.000366 0.007688
GO:2001141 regulation of RNA biosynthetic process 6.36% (14/220) 1.45 0.000757 0.015133
GO:0006355 regulation of DNA-templated transcription 6.36% (14/220) 1.45 0.000757 0.015133
GO:0009056 catabolic process 5.45% (12/220) 1.59 0.000776 0.015162
GO:0009987 cellular process 27.27% (60/220) 0.57 0.000811 0.015485
GO:0110165 cellular anatomical entity 26.36% (58/220) 0.58 0.000847 0.015815
GO:0003682 chromatin binding 2.27% (5/220) 2.76 0.000959 0.017508
GO:0031490 chromatin DNA binding 1.36% (3/220) 3.95 0.001036 0.018515
GO:0016570 histone modification 1.82% (4/220) 3.18 0.001081 0.018913
GO:0071704 organic substance metabolic process 23.18% (51/220) 0.6 0.001341 0.02299
GO:0043231 intracellular membrane-bounded organelle 12.73% (28/220) 0.86 0.00171 0.028168
GO:1901575 organic substance catabolic process 5.0% (11/220) 1.54 0.001704 0.028635
GO:0004721 phosphoprotein phosphatase activity 1.82% (4/220) 2.97 0.001851 0.029901
GO:0043227 membrane-bounded organelle 12.73% (28/220) 0.85 0.001906 0.030209
GO:0043401 steroid hormone mediated signaling pathway 0.91% (2/220) 4.84 0.002313 0.034086
GO:0009742 brassinosteroid mediated signaling pathway 0.91% (2/220) 4.84 0.002313 0.034086
GO:0008289 lipid binding 2.27% (5/220) 2.48 0.002247 0.034315
GO:0005515 protein binding 13.18% (29/220) 0.82 0.002218 0.034508
GO:0006476 protein deacetylation 0.91% (2/220) 4.72 0.002707 0.038546
GO:0016575 histone deacetylation 0.91% (2/220) 4.72 0.002707 0.038546
GO:0015020 glucuronosyltransferase activity 0.91% (2/220) 4.65 0.002969 0.041564
GO:0003700 DNA-binding transcription factor activity 4.09% (9/220) 1.61 0.003188 0.043904
GO:1990070 TRAPPI protein complex 0.45% (1/220) 7.96 0.00402 0.048237
GO:0033290 eukaryotic 48S preinitiation complex 0.45% (1/220) 7.96 0.00402 0.048237
GO:0035601 protein deacylation 0.91% (2/220) 4.47 0.003791 0.048249
GO:0098732 macromolecule deacylation 0.91% (2/220) 4.47 0.003791 0.048249
GO:0043226 organelle 13.64% (30/220) 0.74 0.003937 0.048638
GO:0019774 proteasome core complex, beta-subunit complex 0.45% (1/220) 8.09 0.003655 0.048733
GO:1902494 catalytic complex 4.55% (10/220) 1.47 0.003742 0.049112
GO:0043229 intracellular organelle 13.64% (30/220) 0.74 0.003932 0.049292
GO:0005634 nucleus 7.73% (17/220) 1.06 0.003642 0.049341
GO:1905037 autophagosome organization 0.91% (2/220) 4.38 0.004317 0.049669
GO:0000045 autophagosome assembly 0.91% (2/220) 4.38 0.004317 0.049669
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (220) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms