Coexpression cluster: Cluster_469 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0007017 microtubule-based process 12.12% (12/99) 4.95 0.0 0.0
GO:0003777 microtubule motor activity 9.09% (9/99) 5.87 0.0 0.0
GO:0007018 microtubule-based movement 9.09% (9/99) 5.92 0.0 0.0
GO:0080111 DNA demethylation 6.06% (6/99) 8.03 0.0 0.0
GO:0035514 DNA demethylase activity 6.06% (6/99) 7.93 0.0 0.0
GO:0035510 DNA dealkylation 6.06% (6/99) 7.74 0.0 0.0
GO:0003774 cytoskeletal motor activity 9.09% (9/99) 5.42 0.0 0.0
GO:0007010 cytoskeleton organization 10.1% (10/99) 4.89 0.0 0.0
GO:0019104 DNA N-glycosylase activity 6.06% (6/99) 7.05 0.0 0.0
GO:0070988 demethylation 6.06% (6/99) 6.83 0.0 0.0
GO:0006304 DNA modification 6.06% (6/99) 6.8 0.0 0.0
GO:0043412 macromolecule modification 25.25% (25/99) 2.16 0.0 0.0
GO:0005875 microtubule associated complex 6.06% (6/99) 6.35 0.0 0.0
GO:0000226 microtubule cytoskeleton organization 8.08% (8/99) 4.96 0.0 0.0
GO:0051231 spindle elongation 5.05% (5/99) 7.09 0.0 0.0
GO:0032451 demethylase activity 6.06% (6/99) 6.07 0.0 0.0
GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds 6.06% (6/99) 5.65 0.0 0.0
GO:0007051 spindle organization 6.06% (6/99) 5.6 0.0 0.0
GO:0007052 mitotic spindle organization 5.05% (5/99) 6.27 0.0 0.0
GO:0009987 cellular process 43.43% (43/99) 1.24 0.0 0.0
GO:1902850 microtubule cytoskeleton organization involved in mitosis 5.05% (5/99) 6.18 0.0 0.0
GO:0008017 microtubule binding 7.07% (7/99) 4.41 0.0 1e-06
GO:0015631 tubulin binding 7.07% (7/99) 4.31 0.0 1e-06
GO:0008092 cytoskeletal protein binding 8.08% (8/99) 3.76 0.0 2e-06
GO:0008150 biological_process 51.52% (51/99) 0.89 1e-06 7e-06
GO:0140096 catalytic activity, acting on a protein 20.2% (20/99) 1.84 1e-06 8e-06
GO:0000245 spliceosomal complex assembly 3.03% (3/99) 7.49 1e-06 9e-06
GO:0006996 organelle organization 10.1% (10/99) 2.84 2e-06 1.8e-05
GO:0036211 protein modification process 18.18% (18/99) 1.87 2e-06 2e-05
GO:0019706 protein-cysteine S-palmitoyltransferase activity 3.03% (3/99) 6.9 2e-06 2.4e-05
GO:0019707 protein-cysteine S-acyltransferase activity 3.03% (3/99) 6.9 2e-06 2.4e-05
GO:0018231 peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine 3.03% (3/99) 6.9 2e-06 2.4e-05
GO:0018230 peptidyl-L-cysteine S-palmitoylation 3.03% (3/99) 6.9 2e-06 2.4e-05
GO:0016043 cellular component organization 13.13% (13/99) 2.31 2e-06 2.5e-05
GO:0018198 peptidyl-cysteine modification 3.03% (3/99) 6.84 3e-06 2.6e-05
GO:0035639 purine ribonucleoside triphosphate binding 18.18% (18/99) 1.78 4e-06 3.9e-05
GO:0043170 macromolecule metabolic process 27.27% (27/99) 1.32 5e-06 4.4e-05
GO:0003674 molecular_function 57.58% (57/99) 0.7 5e-06 4.7e-05
GO:0016740 transferase activity 22.22% (22/99) 1.52 6e-06 4.9e-05
GO:0005524 ATP binding 17.17% (17/99) 1.8 7e-06 5.6e-05
GO:0071840 cellular component organization or biogenesis 13.13% (13/99) 2.15 7e-06 5.9e-05
GO:0018193 peptidyl-amino acid modification 6.06% (6/99) 3.67 9e-06 6.7e-05
GO:0016417 S-acyltransferase activity 3.03% (3/99) 6.29 9e-06 6.8e-05
GO:0018345 protein palmitoylation 3.03% (3/99) 6.25 1e-05 7.2e-05
GO:0050684 regulation of mRNA processing 3.03% (3/99) 6.09 1.3e-05 9.7e-05
GO:0140097 catalytic activity, acting on DNA 7.07% (7/99) 3.18 1.4e-05 9.9e-05
GO:0019538 protein metabolic process 19.19% (19/99) 1.56 1.9e-05 0.00013
GO:0006605 protein targeting 4.04% (4/99) 4.53 3.1e-05 0.000193
GO:0016409 palmitoyltransferase activity 3.03% (3/99) 5.69 3e-05 0.000195
GO:0006284 base-excision repair 3.03% (3/99) 5.72 2.8e-05 0.000195
GO:0051539 4 iron, 4 sulfur cluster binding 3.03% (3/99) 5.69 3e-05 0.000197
GO:0016746 acyltransferase activity 8.08% (8/99) 2.74 3e-05 0.000199
GO:0006807 nitrogen compound metabolic process 27.27% (27/99) 1.18 3.2e-05 0.000201
GO:0050794 regulation of cellular process 16.16% (16/99) 1.68 3.6e-05 0.000211
GO:0004674 protein serine/threonine kinase activity 8.08% (8/99) 2.71 3.5e-05 0.000212
GO:0006796 phosphate-containing compound metabolic process 15.15% (15/99) 1.76 3.6e-05 0.000213
GO:0006793 phosphorus metabolic process 15.15% (15/99) 1.75 3.8e-05 0.000219
GO:0006468 protein phosphorylation 12.12% (12/99) 1.98 5.4e-05 0.000307
GO:1903047 mitotic cell cycle process 5.05% (5/99) 3.62 6.1e-05 0.000337
GO:0140657 ATP-dependent activity 9.09% (9/99) 2.39 6e-05 0.000337
GO:0050789 regulation of biological process 16.16% (16/99) 1.61 6.4e-05 0.000347
GO:0006612 protein targeting to membrane 3.03% (3/99) 5.26 7.3e-05 0.000376
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding 4.04% (4/99) 4.21 7.2e-05 0.000377
GO:0004672 protein kinase activity 12.12% (12/99) 1.93 7.5e-05 0.000381
GO:0016310 phosphorylation 12.12% (12/99) 1.94 7.2e-05 0.000383
GO:0051018 protein kinase A binding 2.02% (2/99) 7.23 8.6e-05 0.000384
GO:0051495 positive regulation of cytoskeleton organization 2.02% (2/99) 7.23 8.6e-05 0.000384
GO:0034315 regulation of Arp2/3 complex-mediated actin nucleation 2.02% (2/99) 7.23 8.6e-05 0.000384
GO:0071933 Arp2/3 complex binding 2.02% (2/99) 7.23 8.6e-05 0.000384
GO:1902905 positive regulation of supramolecular fiber organization 2.02% (2/99) 7.23 8.6e-05 0.000384
GO:2000601 positive regulation of Arp2/3 complex-mediated actin nucleation 2.02% (2/99) 7.23 8.6e-05 0.000384
GO:0051127 positive regulation of actin nucleation 2.02% (2/99) 7.23 8.6e-05 0.000384
GO:0034237 protein kinase A regulatory subunit binding 2.02% (2/99) 7.23 8.6e-05 0.000384
GO:0000987 cis-regulatory region sequence-specific DNA binding 4.04% (4/99) 4.12 9.2e-05 0.000403
GO:0032555 purine ribonucleotide binding 18.18% (18/99) 1.44 9.4e-05 0.000406
GO:0003824 catalytic activity 34.34% (34/99) 0.92 8.5e-05 0.000423
GO:0022402 cell cycle process 6.06% (6/99) 3.03 0.000102 0.000431
GO:0032553 ribonucleotide binding 18.18% (18/99) 1.43 0.000104 0.000433
GO:0005643 nuclear pore 3.03% (3/99) 5.09 0.000102 0.000436
GO:1903311 regulation of mRNA metabolic process 3.03% (3/99) 5.04 0.000115 0.000467
GO:0097367 carbohydrate derivative binding 18.18% (18/99) 1.42 0.000114 0.00047
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific 4.04% (4/99) 3.98 0.000133 0.000535
GO:0012505 endomembrane system 3.03% (3/99) 4.93 0.000142 0.000562
GO:0065007 biological regulation 16.16% (16/99) 1.51 0.000146 0.000573
GO:0017076 purine nucleotide binding 18.18% (18/99) 1.39 0.000151 0.000586
GO:0032559 adenyl ribonucleotide binding 17.17% (17/99) 1.44 0.000154 0.000589
GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding 4.04% (4/99) 3.89 0.000168 0.000636
GO:0043543 protein acylation 3.03% (3/99) 4.81 0.000184 0.000687
GO:0045184 establishment of protein localization 6.06% (6/99) 2.86 0.000197 0.00073
GO:0016773 phosphotransferase activity, alcohol group as acceptor 12.12% (12/99) 1.78 0.000201 0.000733
GO:0051125 regulation of actin nucleation 2.02% (2/99) 6.53 0.000226 0.000816
GO:0090150 establishment of protein localization to membrane 3.03% (3/99) 4.66 0.000245 0.000865
GO:0030554 adenyl nucleotide binding 17.17% (17/99) 1.38 0.000243 0.00087
GO:0000166 nucleotide binding 18.18% (18/99) 1.32 0.000265 0.000888
GO:1901265 nucleoside phosphate binding 18.18% (18/99) 1.32 0.000265 0.000888
GO:0005575 cellular_component 35.35% (35/99) 0.82 0.000268 0.000889
GO:0006497 protein lipidation 3.03% (3/99) 4.63 0.00026 0.00089
GO:0044238 primary metabolic process 28.28% (28/99) 0.97 0.000259 0.000896
GO:0016772 transferase activity, transferring phosphorus-containing groups 13.13% (13/99) 1.64 0.000274 0.0009
GO:0016798 hydrolase activity, acting on glycosyl bonds 6.06% (6/99) 2.78 0.000258 0.000903
GO:0016301 kinase activity 12.12% (12/99) 1.72 0.000294 0.000958
GO:0043168 anion binding 18.18% (18/99) 1.3 0.000327 0.001055
GO:0051536 iron-sulfur cluster binding 3.03% (3/99) 4.5 0.000339 0.001072
GO:0051540 metal cluster binding 3.03% (3/99) 4.5 0.000339 0.001072
GO:0008104 protein localization 6.06% (6/99) 2.7 0.000351 0.0011
GO:0070727 cellular macromolecule localization 6.06% (6/99) 2.7 0.000355 0.001103
GO:0033036 macromolecule localization 6.06% (6/99) 2.69 0.000359 0.001104
GO:1901363 heterocyclic compound binding 18.18% (18/99) 1.28 0.000367 0.001119
GO:0036094 small molecule binding 18.18% (18/99) 1.27 0.000398 0.001201
GO:1901564 organonitrogen compound metabolic process 19.19% (19/99) 1.21 0.000462 0.001383
GO:0072657 protein localization to membrane 3.03% (3/99) 4.26 0.000557 0.00165
GO:0110053 regulation of actin filament organization 2.02% (2/99) 5.85 0.000577 0.001694
GO:0005488 binding 37.37% (37/99) 0.73 0.000619 0.001757
GO:0018209 peptidyl-serine modification 3.03% (3/99) 4.21 0.000609 0.001757
GO:0018105 peptidyl-serine phosphorylation 3.03% (3/99) 4.21 0.000609 0.001757
GO:0010638 positive regulation of organelle organization 2.02% (2/99) 5.81 0.000615 0.00176
GO:0005635 nuclear envelope 2.02% (2/99) 5.77 0.000649 0.001826
GO:1902903 regulation of supramolecular fiber organization 2.02% (2/99) 5.75 0.000667 0.001859
GO:0071704 organic substance metabolic process 28.28% (28/99) 0.89 0.000699 0.001931
GO:0051252 regulation of RNA metabolic process 9.09% (9/99) 1.89 0.000768 0.002105
GO:0003690 double-stranded DNA binding 5.05% (5/99) 2.78 0.000862 0.002345
GO:0032956 regulation of actin cytoskeleton organization 2.02% (2/99) 5.48 0.000962 0.002573
GO:0044237 cellular metabolic process 23.23% (23/99) 0.99 0.00096 0.002589
GO:0032970 regulation of actin filament-based process 2.02% (2/99) 5.46 0.000983 0.002608
GO:0019219 regulation of nucleobase-containing compound metabolic process 9.09% (9/99) 1.83 0.001011 0.002641
GO:0043167 ion binding 21.21% (21/99) 1.04 0.001022 0.002647
GO:0022618 protein-RNA complex assembly 3.03% (3/99) 3.96 0.001007 0.00265
GO:0051130 positive regulation of cellular component organization 2.02% (2/99) 5.42 0.00104 0.002674
GO:0071826 protein-RNA complex organization 3.03% (3/99) 3.92 0.001098 0.002801
GO:0140110 transcription regulator activity 7.07% (7/99) 2.14 0.001108 0.002804
GO:0001067 transcription regulatory region nucleic acid binding 4.04% (4/99) 3.15 0.001157 0.002862
GO:0000976 transcription cis-regulatory region binding 4.04% (4/99) 3.15 0.001157 0.002862
GO:0006259 DNA metabolic process 7.07% (7/99) 2.14 0.00114 0.002863
GO:0051668 localization within membrane 3.03% (3/99) 3.82 0.001331 0.003267
GO:0030036 actin cytoskeleton organization 2.02% (2/99) 5.23 0.00135 0.003289
GO:0097159 organic cyclic compound binding 26.26% (26/99) 0.87 0.00136 0.00329
GO:0008152 metabolic process 28.28% (28/99) 0.82 0.001488 0.003573
GO:1990837 sequence-specific double-stranded DNA binding 4.04% (4/99) 3.04 0.001521 0.003627
GO:0002949 tRNA threonylcarbamoyladenosine modification 1.01% (1/99) 9.25 0.001646 0.003896
GO:0051493 regulation of cytoskeleton organization 2.02% (2/99) 4.99 0.001887 0.004434
GO:0051641 cellular localization 6.06% (6/99) 2.19 0.00212 0.004946
GO:0003700 DNA-binding transcription factor activity 6.06% (6/99) 2.17 0.002264 0.005246
GO:0051171 regulation of nitrogen compound metabolic process 9.09% (9/99) 1.65 0.002362 0.005435
GO:0080090 regulation of primary metabolic process 9.09% (9/99) 1.64 0.002516 0.005747
GO:0016311 dephosphorylation 3.03% (3/99) 3.42 0.002915 0.006614
GO:0008240 tripeptidyl-peptidase activity 1.01% (1/99) 8.18 0.003454 0.007783
GO:0005634 nucleus 10.1% (10/99) 1.45 0.003712 0.008308
GO:0070525 tRNA threonylcarbamoyladenosine metabolic process 1.01% (1/99) 8.04 0.003782 0.008408
GO:0000408 EKC/KEOPS complex 1.01% (1/99) 7.98 0.003946 0.008714
GO:0140640 catalytic activity, acting on a nucleic acid 7.07% (7/99) 1.81 0.004011 0.008797
GO:1990498 mitotic spindle microtubule 1.01% (1/99) 7.92 0.004111 0.008956
GO:0035970 peptidyl-threonine dephosphorylation 2.02% (2/99) 4.36 0.004412 0.009549
GO:0006606 protein import into nucleus 2.02% (2/99) 4.18 0.005573 0.011829
GO:0034504 protein localization to nucleus 2.02% (2/99) 4.18 0.005573 0.011829
GO:0072594 establishment of protein localization to organelle 3.03% (3/99) 3.08 0.00555 0.011933
GO:0051170 import into nucleus 2.02% (2/99) 4.17 0.005686 0.011992
GO:0060255 regulation of macromolecule metabolic process 9.09% (9/99) 1.42 0.006728 0.014099
GO:0033365 protein localization to organelle 3.03% (3/99) 2.97 0.006892 0.014351
GO:0031323 regulation of cellular metabolic process 9.09% (9/99) 1.41 0.006987 0.014458
GO:0030029 actin filament-based process 2.02% (2/99) 4.01 0.007055 0.014506
GO:0006281 DNA repair 4.04% (4/99) 2.37 0.007751 0.015838
GO:0019222 regulation of metabolic process 9.09% (9/99) 1.36 0.008502 0.017267
GO:0005794 Golgi apparatus 3.03% (3/99) 2.85 0.008641 0.017335
GO:0022607 cellular component assembly 4.04% (4/99) 2.33 0.008605 0.017369
GO:0003677 DNA binding 8.08% (8/99) 1.46 0.009044 0.018033
GO:0006974 DNA damage response 4.04% (4/99) 2.24 0.010598 0.021005
GO:0005783 endoplasmic reticulum 3.03% (3/99) 2.71 0.011179 0.022022
GO:0110165 cellular anatomical entity 27.27% (27/99) 0.63 0.011661 0.022836
GO:0005856 cytoskeleton 2.02% (2/99) 3.55 0.01292 0.025152
GO:0004722 protein serine/threonine phosphatase activity 2.02% (2/99) 3.48 0.014146 0.026747
GO:0043226 organelle 15.15% (15/99) 0.89 0.014313 0.026756
GO:0006470 protein dephosphorylation 2.02% (2/99) 3.5 0.013853 0.026809
GO:0007165 signal transduction 5.05% (5/99) 1.82 0.014103 0.02682
GO:0043229 intracellular organelle 15.15% (15/99) 0.89 0.014301 0.026887
GO:0031975 envelope 2.02% (2/99) 3.48 0.014097 0.026964
GO:0031967 organelle envelope 2.02% (2/99) 3.48 0.014097 0.026964
GO:0005874 microtubule 2.02% (2/99) 3.44 0.014915 0.027722
GO:0033043 regulation of organelle organization 2.02% (2/99) 3.4 0.015624 0.028878
GO:0043622 cortical microtubule organization 1.01% (1/99) 5.97 0.015856 0.029143
GO:0035556 intracellular signal transduction 3.03% (3/99) 2.49 0.016629 0.030227
GO:0032991 protein-containing complex 10.1% (10/99) 1.13 0.016556 0.030262
GO:0065003 protein-containing complex assembly 3.03% (3/99) 2.49 0.016873 0.030502
GO:0099081 supramolecular polymer 2.02% (2/99) 3.31 0.017621 0.031338
GO:0099512 supramolecular fiber 2.02% (2/99) 3.31 0.017621 0.031338
GO:0099513 polymeric cytoskeletal fiber 2.02% (2/99) 3.31 0.017541 0.031535
GO:0043565 sequence-specific DNA binding 4.04% (4/99) 2.0 0.018328 0.032075
GO:0048511 rhythmic process 1.01% (1/99) 5.76 0.018285 0.03217
GO:0007623 circadian rhythm 1.01% (1/99) 5.76 0.018285 0.03217
GO:0070652 HAUS complex 1.01% (1/99) 5.68 0.019255 0.033519
GO:0055028 cortical microtubule 1.01% (1/99) 5.67 0.019417 0.033622
GO:0016787 hydrolase activity 11.11% (11/99) 1.02 0.019915 0.034304
GO:0016791 phosphatase activity 3.03% (3/99) 2.37 0.020865 0.035752
GO:0043231 intracellular membrane-bounded organelle 13.13% (13/99) 0.9 0.021073 0.035922
GO:0045053 protein retention in Golgi apparatus 1.01% (1/99) 5.55 0.021193 0.035941
GO:0043227 membrane-bounded organelle 13.13% (13/99) 0.89 0.022256 0.037551
GO:0004721 phosphoprotein phosphatase activity 2.02% (2/99) 3.12 0.022545 0.037844
GO:0051128 regulation of cellular component organization 2.02% (2/99) 3.09 0.02345 0.039163
GO:0030865 cortical cytoskeleton organization 1.01% (1/99) 5.32 0.024735 0.041101
GO:0006355 regulation of DNA-templated transcription 6.06% (6/99) 1.38 0.028904 0.047548
GO:2001141 regulation of RNA biosynthetic process 6.06% (6/99) 1.38 0.028904 0.047548
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups 3.03% (3/99) 2.18 0.029248 0.047873
GO:0051169 nuclear transport 2.02% (2/99) 2.9 0.030023 0.048658
GO:0006913 nucleocytoplasmic transport 2.02% (2/99) 2.9 0.030023 0.048658
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (99) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms