Coexpression cluster: Cluster_1118 (Co-expression clusters of Correr et al 2020 (PRJEB38368))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0046112 nucleobase biosynthetic process 4.26% (4/94) 6.05 0.0 5.4e-05
GO:0009218 pyrimidine ribonucleotide metabolic process 4.26% (4/94) 6.09 0.0 6e-05
GO:0006220 pyrimidine nucleotide metabolic process 4.26% (4/94) 5.84 1e-06 6.8e-05
GO:0006221 pyrimidine nucleotide biosynthetic process 4.26% (4/94) 5.84 1e-06 7.8e-05
GO:0009220 pyrimidine ribonucleotide biosynthetic process 4.26% (4/94) 6.09 0.0 8e-05
GO:0006206 pyrimidine nucleobase metabolic process 4.26% (4/94) 6.24 0.0 8e-05
GO:0009112 nucleobase metabolic process 4.26% (4/94) 5.68 1e-06 9.2e-05
GO:0019856 pyrimidine nucleobase biosynthetic process 4.26% (4/94) 6.43 0.0 9.3e-05
GO:0072528 pyrimidine-containing compound biosynthetic process 4.26% (4/94) 5.47 2e-06 0.000145
GO:1901566 organonitrogen compound biosynthetic process 9.57% (9/94) 2.95 3e-06 0.000158
GO:0072527 pyrimidine-containing compound metabolic process 4.26% (4/94) 5.35 3e-06 0.000166
GO:0009147 pyrimidine nucleoside triphosphate metabolic process 3.19% (3/94) 6.3 9e-06 0.000233
GO:0009148 pyrimidine nucleoside triphosphate biosynthetic process 3.19% (3/94) 6.32 8e-06 0.000237
GO:0003883 CTP synthase activity 3.19% (3/94) 6.53 5e-06 0.000241
GO:0009165 nucleotide biosynthetic process 5.32% (5/94) 4.24 8e-06 0.000242
GO:1901293 nucleoside phosphate biosynthetic process 5.32% (5/94) 4.24 8e-06 0.000242
GO:0042802 identical protein binding 3.19% (3/94) 6.24 1e-05 0.000251
GO:0006241 CTP biosynthetic process 3.19% (3/94) 6.35 8e-06 0.000264
GO:0046036 CTP metabolic process 3.19% (3/94) 6.35 8e-06 0.000264
GO:0009209 pyrimidine ribonucleoside triphosphate biosynthetic process 3.19% (3/94) 6.35 8e-06 0.000264
GO:0009208 pyrimidine ribonucleoside triphosphate metabolic process 3.19% (3/94) 6.35 8e-06 0.000264
GO:0044271 cellular nitrogen compound biosynthetic process 9.57% (9/94) 2.65 1.4e-05 0.000359
GO:0009117 nucleotide metabolic process 6.38% (6/94) 3.45 2.1e-05 0.000491
GO:0006753 nucleoside phosphate metabolic process 6.38% (6/94) 3.44 2.2e-05 0.000499
GO:0009142 nucleoside triphosphate biosynthetic process 3.19% (3/94) 5.49 4.5e-05 0.000953
GO:0009201 ribonucleoside triphosphate biosynthetic process 3.19% (3/94) 5.51 4.4e-05 0.000957
GO:0009260 ribonucleotide biosynthetic process 4.26% (4/94) 4.37 4.7e-05 0.000957
GO:0055086 nucleobase-containing small molecule metabolic process 6.38% (6/94) 3.23 4.9e-05 0.000962
GO:0016879 ligase activity, forming carbon-nitrogen bonds 4.26% (4/94) 4.34 5.1e-05 0.000969
GO:0046390 ribose phosphate biosynthetic process 4.26% (4/94) 4.32 5.4e-05 0.000986
GO:0009259 ribonucleotide metabolic process 5.32% (5/94) 3.61 6.2e-05 0.001054
GO:0003824 catalytic activity 35.11% (33/94) 0.96 6.6e-05 0.001057
GO:1901576 organic substance biosynthetic process 12.77% (12/94) 1.96 6e-05 0.001063
GO:0009199 ribonucleoside triphosphate metabolic process 4.26% (4/94) 4.25 6.5e-05 0.001087
GO:0019693 ribose phosphate metabolic process 5.32% (5/94) 3.55 7.5e-05 0.001134
GO:0009141 nucleoside triphosphate metabolic process 4.26% (4/94) 4.2 7.3e-05 0.00115
GO:1901137 carbohydrate derivative biosynthetic process 5.32% (5/94) 3.54 7.8e-05 0.001156
GO:0009058 biosynthetic process 12.77% (12/94) 1.89 9.8e-05 0.001343
GO:0005840 ribosome 4.26% (4/94) 4.1 9.6e-05 0.001351
GO:0005198 structural molecule activity 5.32% (5/94) 3.48 9.6e-05 0.001378
GO:0044249 cellular biosynthetic process 11.7% (11/94) 1.96 0.000128 0.001709
GO:0003735 structural constituent of ribosome 4.26% (4/94) 3.87 0.000175 0.00228
GO:1901135 carbohydrate derivative metabolic process 6.38% (6/94) 2.87 0.00019 0.002417
GO:0006412 translation 4.26% (4/94) 3.7 0.000279 0.003472
GO:0090407 organophosphate biosynthetic process 5.32% (5/94) 3.13 0.000293 0.003569
GO:0009734 auxin-activated signaling pathway 2.13% (2/94) 6.25 0.000334 0.003978
GO:0043043 peptide biosynthetic process 4.26% (4/94) 3.57 0.000386 0.004497
GO:0044281 small molecule metabolic process 9.57% (9/94) 2.01 0.000416 0.004748
GO:1901564 organonitrogen compound metabolic process 19.15% (18/94) 1.21 0.000662 0.007405
GO:0019637 organophosphate metabolic process 6.38% (6/94) 2.49 0.000747 0.008028
GO:0006518 peptide metabolic process 4.26% (4/94) 3.32 0.000746 0.008179
GO:0005575 cellular_component 34.04% (32/94) 0.77 0.001005 0.010588
GO:0043604 amide biosynthetic process 4.26% (4/94) 3.18 0.001058 0.010937
GO:0004648 O-phospho-L-serine:2-oxoglutarate aminotransferase activity 1.06% (1/94) 9.83 0.001094 0.011107
GO:0043228 non-membrane-bounded organelle 6.38% (6/94) 2.35 0.001212 0.011652
GO:0009987 cellular process 31.91% (30/94) 0.79 0.001174 0.011699
GO:0043232 intracellular non-membrane-bounded organelle 6.38% (6/94) 2.35 0.001211 0.011852
GO:0003674 molecular_function 51.06% (48/94) 0.53 0.001285 0.01214
GO:0034654 nucleobase-containing compound biosynthetic process 5.32% (5/94) 2.63 0.001343 0.01247
GO:0034641 cellular nitrogen compound metabolic process 13.83% (13/94) 1.37 0.001494 0.013641
GO:0044237 cellular metabolic process 22.34% (21/94) 0.93 0.002602 0.023371
GO:0110165 cellular anatomical entity 29.79% (28/94) 0.75 0.002767 0.024458
GO:0008150 biological_process 41.49% (39/94) 0.58 0.002978 0.025903
GO:0043603 amide metabolic process 4.26% (4/94) 2.76 0.003042 0.026045
GO:0070681 glutaminyl-tRNAGln biosynthesis via transamidation 1.06% (1/94) 8.06 0.003747 0.029338
GO:0000408 EKC/KEOPS complex 1.06% (1/94) 8.06 0.003747 0.029338
GO:0070525 tRNA threonylcarbamoyladenosine metabolic process 1.06% (1/94) 8.12 0.003592 0.029376
GO:0004128 cytochrome-b5 reductase activity, acting on NAD(P)H 1.06% (1/94) 8.12 0.003592 0.029376
GO:0006807 nitrogen compound metabolic process 22.34% (21/94) 0.89 0.003665 0.029534
GO:0016874 ligase activity 4.26% (4/94) 2.7 0.003524 0.029706
GO:0018130 heterocycle biosynthetic process 5.32% (5/94) 2.27 0.003923 0.030278
GO:0019786 protein-phosphatidylethanolamide deconjugating activity 1.06% (1/94) 7.94 0.004059 0.030895
GO:1904292 regulation of ERAD pathway 1.06% (1/94) 7.6 0.005149 0.033197
GO:1905898 positive regulation of response to endoplasmic reticulum stress 1.06% (1/94) 7.6 0.005149 0.033197
GO:1904294 positive regulation of ERAD pathway 1.06% (1/94) 7.6 0.005149 0.033197
GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity 1.06% (1/94) 7.64 0.004994 0.033784
GO:2000142 regulation of DNA-templated transcription initiation 1.06% (1/94) 7.64 0.004994 0.033784
GO:2000144 positive regulation of DNA-templated transcription initiation 1.06% (1/94) 7.64 0.004994 0.033784
GO:0060260 regulation of transcription initiation by RNA polymerase II 1.06% (1/94) 7.64 0.004994 0.033784
GO:0060261 positive regulation of transcription initiation by RNA polymerase II 1.06% (1/94) 7.64 0.004994 0.033784
GO:0031053 primary miRNA processing 1.06% (1/94) 7.55 0.005305 0.033803
GO:0006006 glucose metabolic process 2.13% (2/94) 4.25 0.005084 0.033975
GO:0017007 protein-bilin linkage 1.06% (1/94) 7.74 0.004682 0.034674
GO:0017009 protein-phycocyanobilin linkage 1.06% (1/94) 7.74 0.004682 0.034674
GO:0019438 aromatic compound biosynthetic process 5.32% (5/94) 2.2 0.004841 0.035372
GO:0016491 oxidoreductase activity 8.51% (8/94) 1.61 0.004916 0.03545
GO:0006564 L-serine biosynthetic process 1.06% (1/94) 7.39 0.005927 0.037334
GO:0017006 protein-tetrapyrrole linkage 1.06% (1/94) 7.36 0.006083 0.037878
GO:0008152 metabolic process 26.6% (25/94) 0.73 0.006206 0.038213
GO:0046049 UMP metabolic process 1.06% (1/94) 7.18 0.00686 0.038359
GO:0006222 UMP biosynthetic process 1.06% (1/94) 7.18 0.00686 0.038359
GO:0009174 pyrimidine ribonucleoside monophosphate biosynthetic process 1.06% (1/94) 7.18 0.00686 0.038359
GO:0009173 pyrimidine ribonucleoside monophosphate metabolic process 1.06% (1/94) 7.18 0.00686 0.038359
GO:0004590 orotidine-5'-phosphate decarboxylase activity 1.06% (1/94) 7.18 0.00686 0.038359
GO:0006450 regulation of translational fidelity 1.06% (1/94) 7.28 0.006394 0.03893
GO:0032040 small-subunit processome 2.13% (2/94) 4.0 0.007152 0.039586
GO:0044238 primary metabolic process 24.47% (23/94) 0.77 0.006602 0.03976
GO:0004588 orotate phosphoribosyltransferase activity 1.06% (1/94) 7.22 0.006704 0.039935
GO:0071704 organic substance metabolic process 25.53% (24/94) 0.74 0.006803 0.040087
GO:0004347 glucose-6-phosphate isomerase activity 1.06% (1/94) 7.06 0.007481 0.040193
GO:0005777 peroxisome 2.13% (2/94) 3.97 0.007446 0.040399
GO:1901362 organic cyclic compound biosynthetic process 5.32% (5/94) 2.05 0.007405 0.040578
GO:1905897 regulation of response to endoplasmic reticulum stress 1.06% (1/94) 7.03 0.007636 0.040628
GO:0005971 ribonucleoside-diphosphate reductase complex 1.06% (1/94) 6.86 0.008567 0.045144
GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor 1.06% (1/94) 6.81 0.008878 0.045467
GO:0061731 ribonucleoside-diphosphate reductase activity 1.06% (1/94) 6.81 0.008878 0.045467
GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor 1.06% (1/94) 6.81 0.008878 0.045467
GO:1990904 ribonucleoprotein complex 4.26% (4/94) 2.31 0.008995 0.045639
GO:0006796 phosphate-containing compound metabolic process 10.64% (10/94) 1.25 0.009553 0.04759
GO:0008441 3'(2'),5'-bisphosphate nucleotidase activity 1.06% (1/94) 6.71 0.009498 0.04775
GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity 1.06% (1/94) 6.66 0.009808 0.048419
GO:0006793 phosphorus metabolic process 10.64% (10/94) 1.24 0.009922 0.048546
GO:0004096 catalase activity 1.06% (1/94) 6.62 0.010117 0.049065
GO:0009130 pyrimidine nucleoside monophosphate biosynthetic process 1.06% (1/94) 6.58 0.010427 0.049259
GO:0009129 pyrimidine nucleoside monophosphate metabolic process 1.06% (1/94) 6.58 0.010427 0.049259
GO:0035196 miRNA processing 1.06% (1/94) 6.6 0.010272 0.049379
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (94) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms