Coexpression cluster: Cluster_6198 (Co-expression clusters of Correr et al 2020 (PRJEB38368))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0010017 red or far-red light signaling pathway 25.0% (1/4) 12.5 0.000173 0.005711
GO:0010218 response to far red light 25.0% (1/4) 12.5 0.000173 0.005711
GO:0071489 cellular response to red or far red light 25.0% (1/4) 12.5 0.000173 0.005711
GO:0010114 response to red light 25.0% (1/4) 12.07 0.000233 0.005766
GO:0010099 regulation of photomorphogenesis 25.0% (1/4) 11.58 0.000326 0.006457
GO:0071214 cellular response to abiotic stimulus 25.0% (1/4) 10.38 0.000752 0.007444
GO:0104004 cellular response to environmental stimulus 25.0% (1/4) 10.38 0.000752 0.007444
GO:0071482 cellular response to light stimulus 25.0% (1/4) 10.86 0.000539 0.007624
GO:0071478 cellular response to radiation 25.0% (1/4) 10.6 0.000646 0.007988
GO:2000030 regulation of response to red or far red light 25.0% (1/4) 11.01 0.000486 0.008016
GO:0009639 response to red or far red light 25.0% (1/4) 9.57 0.001317 0.011856
GO:2000026 regulation of multicellular organismal development 25.0% (1/4) 9.31 0.001577 0.012007
GO:0048580 regulation of post-embryonic development 25.0% (1/4) 9.31 0.00157 0.012952
GO:0051239 regulation of multicellular organismal process 25.0% (1/4) 8.88 0.002115 0.014956
GO:0050793 regulation of developmental process 25.0% (1/4) 7.97 0.003994 0.026364
GO:0009416 response to light stimulus 25.0% (1/4) 7.41 0.005884 0.032365
GO:0045944 positive regulation of transcription by RNA polymerase II 25.0% (1/4) 7.1 0.007269 0.03271
GO:0009526 plastid envelope 25.0% (1/4) 7.47 0.005639 0.032841
GO:0009941 chloroplast envelope 25.0% (1/4) 7.47 0.005639 0.032841
GO:0009314 response to radiation 25.0% (1/4) 7.29 0.006362 0.033147
GO:0031975 envelope 25.0% (1/4) 7.11 0.007209 0.033986
GO:0031967 organelle envelope 25.0% (1/4) 7.11 0.007209 0.033986
GO:0048583 regulation of response to stimulus 25.0% (1/4) 6.69 0.009623 0.041423
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific 25.0% (1/4) 6.61 0.010211 0.042122
GO:0045893 positive regulation of DNA-templated transcription 25.0% (1/4) 6.32 0.012482 0.045766
GO:1902680 positive regulation of RNA biosynthetic process 25.0% (1/4) 6.32 0.012482 0.045766
GO:0009628 response to abiotic stimulus 25.0% (1/4) 6.35 0.012238 0.048461
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 25.0% (1/4) 5.98 0.015702 0.048579
GO:0010557 positive regulation of macromolecule biosynthetic process 25.0% (1/4) 6.02 0.015275 0.04878
GO:0009891 positive regulation of biosynthetic process 25.0% (1/4) 6.02 0.015275 0.04878
GO:0031328 positive regulation of cellular biosynthetic process 25.0% (1/4) 6.02 0.015275 0.04878
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (4) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms