Coexpression cluster: Cluster_2858 (Co-expression clusters of Correr et al 2020 (PRJEB38368))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0046524 sucrose-phosphate synthase activity 2.67% (2/75) 9.88 2e-06 0.000833
GO:0042549 photosystem II stabilization 2.67% (2/75) 8.92 8e-06 0.001615
GO:0042548 regulation of photosynthesis, light reaction 2.67% (2/75) 7.92 3.3e-05 0.003271
GO:0043467 regulation of generation of precursor metabolites and energy 2.67% (2/75) 7.92 3.3e-05 0.003271
GO:0010109 regulation of photosynthesis 2.67% (2/75) 7.65 4.8e-05 0.003851
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 4.0% (3/75) 5.32 6.4e-05 0.004257
GO:0009536 plastid 6.67% (5/75) 3.42 0.000112 0.004957
GO:0016859 cis-trans isomerase activity 4.0% (3/75) 5.05 0.00011 0.005498
GO:0009507 chloroplast 6.67% (5/75) 3.46 9.9e-05 0.005619
GO:0009535 chloroplast thylakoid membrane 4.0% (3/75) 4.69 0.00023 0.007046
GO:0055035 plastid thylakoid membrane 4.0% (3/75) 4.69 0.00023 0.007046
GO:0009523 photosystem II 2.67% (2/75) 6.27 0.000322 0.007144
GO:0043226 organelle 21.33% (16/75) 1.39 0.000309 0.007244
GO:0043229 intracellular organelle 21.33% (16/75) 1.39 0.000308 0.007687
GO:0043227 membrane-bounded organelle 20.0% (15/75) 1.5 0.000212 0.007703
GO:0042651 thylakoid membrane 4.0% (3/75) 4.57 0.000293 0.007791
GO:0034357 photosynthetic membrane 4.0% (3/75) 4.57 0.000293 0.007791
GO:0043231 intracellular membrane-bounded organelle 20.0% (15/75) 1.51 0.000196 0.007809
GO:0110165 cellular anatomical entity 33.33% (25/75) 0.92 0.000797 0.014446
GO:0036297 interstrand cross-link repair 2.67% (2/75) 5.72 0.000691 0.014506
GO:0008824 cyanate hydratase activity 1.33% (1/75) 10.38 0.000749 0.014935
GO:0042170 plastid membrane 4.0% (3/75) 4.08 0.000786 0.014939
GO:0009521 photosystem 2.67% (2/75) 5.53 0.000902 0.015001
GO:0009439 cyanate metabolic process 1.33% (1/75) 10.16 0.000873 0.01515
GO:0005985 sucrose metabolic process 2.67% (2/75) 5.43 0.001029 0.015796
GO:0031968 organelle outer membrane 4.0% (3/75) 3.96 0.000996 0.015893
GO:0019867 outer membrane 4.0% (3/75) 3.89 0.001145 0.016914
GO:0140056 organelle localization by membrane tethering 2.67% (2/75) 5.2 0.001407 0.019361
GO:0022406 membrane docking 2.67% (2/75) 5.2 0.001407 0.019361
GO:0015979 photosynthesis 2.67% (2/75) 5.13 0.00155 0.020618
GO:0004846 urate oxidase activity 1.33% (1/75) 9.16 0.001746 0.021769
GO:0016663 oxidoreductase activity, acting on other nitrogenous compounds as donors, oxygen as acceptor 1.33% (1/75) 9.16 0.001746 0.021769
GO:0048200 Golgi transport vesicle coating 1.33% (1/75) 8.65 0.002493 0.029258
GO:0048205 COPI coating of Golgi vesicle 1.33% (1/75) 8.65 0.002493 0.029258
GO:0006145 purine nucleobase catabolic process 1.33% (1/75) 8.51 0.002742 0.031261
GO:0005984 disaccharide metabolic process 2.67% (2/75) 4.52 0.003544 0.039281
GO:0046905 15-cis-phytoene synthase activity 1.33% (1/75) 7.97 0.003986 0.042986
GO:0046415 urate metabolic process 1.33% (1/75) 7.8 0.004483 0.044721
GO:0019628 urate catabolic process 1.33% (1/75) 7.8 0.004483 0.044721
GO:0016050 vesicle organization 2.67% (2/75) 4.3 0.00474 0.045033
GO:0043335 protein unfolding 1.33% (1/75) 7.68 0.004856 0.04506
GO:0005575 cellular_component 33.33% (25/75) 0.74 0.004639 0.045145
GO:0009311 oligosaccharide metabolic process 2.67% (2/75) 4.36 0.004374 0.045929
GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors 1.33% (1/75) 7.58 0.005229 0.047414
GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity 1.33% (1/75) 7.51 0.005477 0.048562
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (75) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms