Coexpression cluster: Cluster_98 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA 4.41% (3/68) 7.67 0.0 6.5e-05
GO:0033962 P-body assembly 4.41% (3/68) 7.87 0.0 8.5e-05
GO:0110154 RNA decapping 4.41% (3/68) 6.73 3e-06 0.000227
GO:0110156 methylguanosine-cap decapping 4.41% (3/68) 6.81 3e-06 0.000261
GO:0000932 P-body 4.41% (3/68) 5.63 3.4e-05 0.001493
GO:0035770 ribonucleoprotein granule 4.41% (3/68) 5.44 5e-05 0.00164
GO:0009330 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex 2.94% (2/68) 7.94 3.2e-05 0.001688
GO:0036464 cytoplasmic ribonucleoprotein granule 4.41% (3/68) 5.46 4.8e-05 0.001794
GO:0140694 non-membrane-bounded organelle assembly 4.41% (3/68) 5.19 8.4e-05 0.002445
GO:0000956 nuclear-transcribed mRNA catabolic process 4.41% (3/68) 4.91 0.000148 0.003881
GO:0070925 organelle assembly 4.41% (3/68) 4.67 0.00024 0.005249
GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity 2.94% (2/68) 6.53 0.000226 0.005398
GO:0006402 mRNA catabolic process 4.41% (3/68) 4.59 0.000278 0.00563
GO:0006265 DNA topological change 2.94% (2/68) 6.01 0.000466 0.008169
GO:0006401 RNA catabolic process 4.41% (3/68) 4.35 0.000455 0.008543
GO:0003916 DNA topoisomerase activity 2.94% (2/68) 5.7 0.000713 0.011728
GO:0010556 regulation of macromolecule biosynthetic process 11.76% (8/68) 1.92 0.001215 0.017756
GO:0009889 regulation of biosynthetic process 11.76% (8/68) 1.89 0.001366 0.017961
GO:0010468 regulation of gene expression 11.76% (8/68) 1.93 0.001164 0.018009
GO:0031326 regulation of cellular biosynthetic process 11.76% (8/68) 1.9 0.00136 0.018818
GO:0090304 nucleic acid metabolic process 13.24% (9/68) 1.73 0.001516 0.018986
GO:0099080 supramolecular complex 4.41% (3/68) 3.7 0.001647 0.019688
GO:0010629 negative regulation of gene expression 4.41% (3/68) 3.42 0.002845 0.022675
GO:0019222 regulation of metabolic process 11.76% (8/68) 1.74 0.002708 0.022973
GO:0006352 DNA-templated transcription initiation 2.94% (2/68) 4.77 0.002538 0.023018
GO:0006996 organelle organization 7.35% (5/68) 2.38 0.002803 0.023041
GO:0051351 positive regulation of ligase activity 1.47% (1/68) 8.65 0.002487 0.023356
GO:0051340 regulation of ligase activity 1.47% (1/68) 8.65 0.002487 0.023356
GO:0010165 response to X-ray 1.47% (1/68) 8.65 0.002487 0.023356
GO:0005958 DNA-dependent protein kinase-DNA ligase 4 complex 1.47% (1/68) 8.65 0.002487 0.023356
GO:0034655 nucleobase-containing compound catabolic process 4.41% (3/68) 3.45 0.002696 0.023633
GO:0031323 regulation of cellular metabolic process 11.76% (8/68) 1.78 0.00223 0.024433
GO:0060255 regulation of macromolecule metabolic process 11.76% (8/68) 1.79 0.002148 0.02456
GO:0044270 cellular nitrogen compound catabolic process 4.41% (3/68) 3.33 0.003435 0.025809
GO:0046700 heterocycle catabolic process 4.41% (3/68) 3.33 0.003435 0.025809
GO:0035672 oligopeptide transmembrane transport 1.47% (1/68) 7.59 0.005192 0.032513
GO:0090374 oligopeptide export from mitochondrion 1.47% (1/68) 7.59 0.005192 0.032513
GO:0006139 nucleobase-containing compound metabolic process 13.24% (9/68) 1.49 0.004464 0.032612
GO:0030121 AP-1 adaptor complex 1.47% (1/68) 7.62 0.00508 0.033399
GO:1901361 organic cyclic compound catabolic process 4.41% (3/68) 3.13 0.005001 0.033725
GO:0071103 DNA conformation change 2.94% (2/68) 4.28 0.004884 0.0338
GO:0019439 aromatic compound catabolic process 4.41% (3/68) 3.16 0.004767 0.033885
GO:0010558 negative regulation of macromolecule biosynthetic process 4.41% (3/68) 3.06 0.005739 0.034302
GO:0010212 response to ionizing radiation 1.47% (1/68) 7.47 0.005642 0.034511
GO:0009890 negative regulation of biosynthetic process 4.41% (3/68) 3.01 0.006279 0.035898
GO:0051103 DNA ligation involved in DNA repair 1.47% (1/68) 7.16 0.006992 0.036057
GO:0032807 DNA ligase IV complex 1.47% (1/68) 7.16 0.006992 0.036057
GO:1990391 DNA repair complex 1.47% (1/68) 7.16 0.006992 0.036057
GO:0070419 nonhomologous end joining complex 1.47% (1/68) 7.16 0.006992 0.036057
GO:0016071 mRNA metabolic process 4.41% (3/68) 2.93 0.007286 0.036157
GO:0031327 negative regulation of cellular biosynthetic process 4.41% (3/68) 3.02 0.006206 0.03627
GO:0035615 clathrin adaptor activity 1.47% (1/68) 7.11 0.007217 0.0365
GO:0009892 negative regulation of metabolic process 4.41% (3/68) 2.86 0.008441 0.038275
GO:0006725 cellular aromatic compound metabolic process 13.24% (9/68) 1.36 0.008009 0.038296
GO:0031324 negative regulation of cellular metabolic process 4.41% (3/68) 2.86 0.008316 0.038373
GO:0140312 cargo adaptor activity 1.47% (1/68) 6.92 0.008227 0.03864
GO:0010605 negative regulation of macromolecule metabolic process 4.41% (3/68) 2.89 0.007962 0.038779
GO:0046483 heterocycle metabolic process 13.24% (9/68) 1.39 0.006934 0.038802
GO:0016043 cellular component organization 8.82% (6/68) 1.74 0.009256 0.041261
GO:1901360 organic cyclic compound metabolic process 13.24% (9/68) 1.32 0.009581 0.041995
GO:0034641 cellular nitrogen compound metabolic process 13.24% (9/68) 1.31 0.010068 0.043406
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (68) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms