Coexpression cluster: Cluster_8139 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0071489 cellular response to red or far red light 50.0% (1/2) 13.5 8.7e-05 0.003115
GO:0010218 response to far red light 50.0% (1/2) 13.5 8.7e-05 0.003115
GO:0010017 red or far-red light signaling pathway 50.0% (1/2) 13.5 8.7e-05 0.003115
GO:0010114 response to red light 50.0% (1/2) 13.07 0.000116 0.003145
GO:0010099 regulation of photomorphogenesis 50.0% (1/2) 12.58 0.000163 0.003522
GO:0071214 cellular response to abiotic stimulus 50.0% (1/2) 11.38 0.000376 0.004061
GO:0104004 cellular response to environmental stimulus 50.0% (1/2) 11.38 0.000376 0.004061
GO:0071482 cellular response to light stimulus 50.0% (1/2) 11.86 0.00027 0.004159
GO:0071478 cellular response to radiation 50.0% (1/2) 11.6 0.000323 0.004358
GO:2000030 regulation of response to red or far red light 50.0% (1/2) 12.01 0.000243 0.004373
GO:0009639 response to red or far red light 50.0% (1/2) 10.57 0.000659 0.006469
GO:2000026 regulation of multicellular organismal development 50.0% (1/2) 10.31 0.000789 0.006552
GO:0048580 regulation of post-embryonic development 50.0% (1/2) 10.31 0.000785 0.007068
GO:0051239 regulation of multicellular organismal process 50.0% (1/2) 9.88 0.001058 0.008162
GO:0050793 regulation of developmental process 50.0% (1/2) 8.97 0.001999 0.014394
GO:0016759 cellulose synthase activity 50.0% (1/2) 8.7 0.002401 0.014409
GO:0016760 cellulose synthase (UDP-forming) activity 50.0% (1/2) 8.75 0.002322 0.01475
GO:0030243 cellulose metabolic process 50.0% (1/2) 8.51 0.002734 0.014763
GO:0051273 beta-glucan metabolic process 50.0% (1/2) 8.18 0.003442 0.014868
GO:0045944 positive regulation of transcription by RNA polymerase II 50.0% (1/2) 8.1 0.003641 0.015124
GO:0009416 response to light stimulus 50.0% (1/2) 8.41 0.002947 0.015154
GO:0042546 cell wall biogenesis 50.0% (1/2) 7.97 0.003993 0.015402
GO:0051274 beta-glucan biosynthetic process 50.0% (1/2) 8.18 0.003438 0.015473
GO:0030244 cellulose biosynthetic process 50.0% (1/2) 8.52 0.002731 0.015521
GO:0009833 plant-type primary cell wall biogenesis 50.0% (1/2) 8.76 0.002312 0.015604
GO:0009314 response to radiation 50.0% (1/2) 8.29 0.003186 0.01564
GO:0071669 plant-type cell wall organization or biogenesis 50.0% (1/2) 8.0 0.00391 0.01564
GO:0009832 plant-type cell wall biogenesis 50.0% (1/2) 8.21 0.003382 0.01588
GO:0009250 glucan biosynthetic process 50.0% (1/2) 7.82 0.004422 0.016466
GO:1902680 positive regulation of RNA biosynthetic process 50.0% (1/2) 7.32 0.00626 0.016491
GO:0045893 positive regulation of DNA-templated transcription 50.0% (1/2) 7.32 0.00626 0.016491
GO:0031984 organelle subcompartment 50.0% (1/2) 7.49 0.00555 0.017127
GO:0044085 cellular component biogenesis 50.0% (1/2) 7.33 0.006201 0.017171
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific 50.0% (1/2) 7.61 0.005119 0.017276
GO:0005802 trans-Golgi network 50.0% (1/2) 7.65 0.004959 0.017278
GO:0048583 regulation of response to stimulus 50.0% (1/2) 7.69 0.004823 0.017364
GO:0009628 response to abiotic stimulus 50.0% (1/2) 7.35 0.006138 0.017444
GO:0000271 polysaccharide biosynthetic process 50.0% (1/2) 7.51 0.005494 0.017451
GO:0016051 carbohydrate biosynthetic process 50.0% (1/2) 7.02 0.007677 0.01764
GO:0044042 glucan metabolic process 50.0% (1/2) 7.4 0.005892 0.017676
GO:0098791 Golgi apparatus subcompartment 50.0% (1/2) 7.53 0.005418 0.01773
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 50.0% (1/2) 6.98 0.007882 0.017735
GO:0005976 polysaccharide metabolic process 50.0% (1/2) 6.92 0.008243 0.017806
GO:0071554 cell wall organization or biogenesis 50.0% (1/2) 7.35 0.006108 0.017828
GO:0010557 positive regulation of macromolecule biosynthetic process 50.0% (1/2) 7.02 0.007667 0.018
GO:0031328 positive regulation of cellular biosynthetic process 50.0% (1/2) 7.02 0.007667 0.018
GO:0009891 positive regulation of biosynthetic process 50.0% (1/2) 7.02 0.007667 0.018
GO:1903047 mitotic cell cycle process 50.0% (1/2) 6.92 0.008227 0.018133
GO:0051254 positive regulation of RNA metabolic process 50.0% (1/2) 7.06 0.007461 0.018739
GO:0035251 UDP-glucosyltransferase activity 50.0% (1/2) 7.07 0.007445 0.019143
GO:0046527 glucosyltransferase activity 50.0% (1/2) 6.79 0.009045 0.019155
GO:0031325 positive regulation of cellular metabolic process 50.0% (1/2) 6.71 0.009509 0.01975
GO:0009893 positive regulation of metabolic process 50.0% (1/2) 6.49 0.011065 0.02134
GO:0010604 positive regulation of macromolecule metabolic process 50.0% (1/2) 6.49 0.011059 0.021715
GO:0051173 positive regulation of nitrogen compound metabolic process 50.0% (1/2) 6.51 0.010913 0.021826
GO:0048522 positive regulation of cellular process 50.0% (1/2) 6.54 0.010741 0.021887
GO:0048518 positive regulation of biological process 50.0% (1/2) 6.28 0.012865 0.024376
GO:0008194 UDP-glycosyltransferase activity 50.0% (1/2) 6.22 0.013374 0.024481
GO:0006357 regulation of transcription by RNA polymerase II 50.0% (1/2) 6.24 0.013215 0.024608
GO:0022402 cell cycle process 50.0% (1/2) 6.08 0.014752 0.026554
GO:0016758 hexosyltransferase activity 50.0% (1/2) 6.0 0.015518 0.027475
GO:0016757 glycosyltransferase activity 50.0% (1/2) 5.39 0.023685 0.041257
GO:0009059 macromolecule biosynthetic process 50.0% (1/2) 5.31 0.025098 0.042353
GO:0051716 cellular response to stimulus 50.0% (1/2) 5.33 0.02476 0.042445
GO:0003700 DNA-binding transcription factor activity 50.0% (1/2) 5.22 0.026675 0.044321
GO:0007165 signal transduction 50.0% (1/2) 5.13 0.028385 0.046448
GO:0005975 carbohydrate metabolic process 50.0% (1/2) 5.06 0.029677 0.047837
GO:0110165 cellular anatomical entity 100.0% (2/2) 2.5 0.031232 0.049603
GO:0140110 transcription regulator activity 50.0% (1/2) 4.97 0.031751 0.049697
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms