Coexpression cluster: Cluster_6288 (Co-expression clusters of Correr et al 2020 (PRJEB38368))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0001510 RNA methylation 66.67% (2/3) 8.76 7e-06 0.000427
GO:0043414 macromolecule methylation 66.67% (2/3) 7.8 2.7e-05 0.000799
GO:0032259 methylation 66.67% (2/3) 7.42 4.6e-05 0.000912
GO:0009451 RNA modification 66.67% (2/3) 6.76 0.000113 0.001702
GO:0034470 ncRNA processing 66.67% (2/3) 6.53 0.000155 0.001855
GO:0016435 rRNA (guanine) methyltransferase activity 33.33% (1/3) 11.66 0.000309 0.002653
GO:0034660 ncRNA metabolic process 66.67% (2/3) 6.05 0.0003 0.003005
GO:0006396 RNA processing 66.67% (2/3) 5.79 0.000432 0.003238
GO:0002098 tRNA wobble uridine modification 33.33% (1/3) 10.0 0.000978 0.006521
GO:0002097 tRNA wobble base modification 33.33% (1/3) 9.82 0.001103 0.006617
GO:0008649 rRNA methyltransferase activity 33.33% (1/3) 9.62 0.001267 0.006914
GO:0031167 rRNA methylation 33.33% (1/3) 9.36 0.001517 0.007584
GO:0016070 RNA metabolic process 66.67% (2/3) 4.78 0.001738 0.008022
GO:0030488 tRNA methylation 33.33% (1/3) 8.8 0.002235 0.008939
GO:0000154 rRNA modification 33.33% (1/3) 8.87 0.00214 0.009172
GO:0140102 catalytic activity, acting on a rRNA 33.33% (1/3) 8.58 0.002619 0.00982
GO:0008173 RNA methyltransferase activity 33.33% (1/3) 7.98 0.003954 0.013954
GO:0090304 nucleic acid metabolic process 66.67% (2/3) 4.06 0.004664 0.015548
GO:0006400 tRNA modification 33.33% (1/3) 7.52 0.005427 0.017137
GO:0006139 nucleobase-containing compound metabolic process 66.67% (2/3) 3.83 0.006416 0.019247
GO:0034641 cellular nitrogen compound metabolic process 66.67% (2/3) 3.64 0.008265 0.019835
GO:0008033 tRNA processing 33.33% (1/3) 7.16 0.006983 0.019951
GO:0046483 heterocycle metabolic process 66.67% (2/3) 3.73 0.007347 0.020036
GO:0006725 cellular aromatic compound metabolic process 66.67% (2/3) 3.69 0.007686 0.02005
GO:1901360 organic cyclic compound metabolic process 66.67% (2/3) 3.65 0.008135 0.020337
GO:0043412 macromolecule modification 66.67% (2/3) 3.56 0.009172 0.021166
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity 33.33% (1/3) 6.59 0.010358 0.023018
GO:0006364 rRNA processing 33.33% (1/3) 6.41 0.011676 0.02502
GO:0016072 rRNA metabolic process 33.33% (1/3) 6.3 0.012627 0.026124
GO:0006399 tRNA metabolic process 33.33% (1/3) 6.05 0.015006 0.030012
GO:0009536 plastid 33.33% (1/3) 5.74 0.01855 0.032736
GO:0016741 transferase activity, transferring one-carbon groups 33.33% (1/3) 5.78 0.018121 0.032948
GO:0008168 methyltransferase activity 33.33% (1/3) 5.84 0.017406 0.033689
GO:0009507 chloroplast 33.33% (1/3) 5.78 0.018057 0.033857
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (3) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms