Coexpression cluster: Cluster_3001 (Co-expression clusters of Correr et al 2020 (PRJEB38368))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0010165 response to X-ray 1.69% (2/118) 8.85 9e-06 0.001031
GO:0005958 DNA-dependent protein kinase-DNA ligase 4 complex 1.69% (2/118) 8.85 9e-06 0.001031
GO:0051351 positive regulation of ligase activity 1.69% (2/118) 8.85 9e-06 0.001031
GO:0051340 regulation of ligase activity 1.69% (2/118) 8.85 9e-06 0.001031
GO:0032807 DNA ligase IV complex 1.69% (2/118) 7.36 7.2e-05 0.003357
GO:1990391 DNA repair complex 1.69% (2/118) 7.36 7.2e-05 0.003357
GO:0051103 DNA ligation involved in DNA repair 1.69% (2/118) 7.36 7.2e-05 0.003357
GO:0070419 nonhomologous end joining complex 1.69% (2/118) 7.36 7.2e-05 0.003357
GO:0010212 response to ionizing radiation 1.69% (2/118) 7.67 4.7e-05 0.004357
GO:0006470 protein dephosphorylation 3.39% (4/118) 4.24 6.7e-05 0.005202
GO:0004721 phosphoprotein phosphatase activity 3.39% (4/118) 3.87 0.00018 0.00767
GO:0035970 peptidyl-threonine dephosphorylation 2.54% (3/118) 4.69 0.000233 0.009101
GO:0006266 DNA ligation 1.69% (2/118) 6.44 0.000256 0.009203
GO:0016311 dephosphorylation 3.39% (4/118) 3.58 0.000382 0.012782
GO:0051604 protein maturation 2.54% (3/118) 4.19 0.000636 0.019832
GO:0043231 intracellular membrane-bounded organelle 15.25% (18/118) 1.12 0.001489 0.036675
GO:0004722 protein serine/threonine phosphatase activity 2.54% (3/118) 3.81 0.001353 0.037244
GO:1901564 organonitrogen compound metabolic process 16.95% (20/118) 1.03 0.001685 0.037558
GO:0006742 NADP catabolic process 0.85% (1/118) 9.14 0.001766 0.037565
GO:0006303 double-strand break repair via nonhomologous end joining 1.69% (2/118) 5.26 0.001293 0.037818
GO:0043227 membrane-bounded organelle 15.25% (18/118) 1.11 0.001618 0.037865
GO:0005634 nucleus 10.17% (12/118) 1.46 0.001472 0.03827
GO:0019677 NAD catabolic process 0.85% (1/118) 8.99 0.001962 0.03992
GO:0019674 NAD metabolic process 1.69% (2/118) 4.87 0.002208 0.041335
GO:0005575 cellular_component 31.36% (37/118) 0.65 0.002327 0.041892
GO:0005951 carbamoyl-phosphate synthase complex 0.85% (1/118) 8.85 0.002158 0.042079
GO:0034356 NAD biosynthesis via nicotinamide riboside salvage pathway 0.85% (1/118) 8.61 0.00255 0.044195
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (118) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms