Coexpression cluster: Cluster_3138 (Co-expression clusters of Correr et al 2020 (PRJEB38368))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044391 ribosomal subunit 9.84% (6/61) 5.49 0.0 2e-06
GO:0003735 structural constituent of ribosome 9.84% (6/61) 5.08 0.0 6e-06
GO:1990904 ribonucleoprotein complex 13.11% (8/61) 3.93 0.0 8e-06
GO:0032991 protein-containing complex 24.59% (15/61) 2.41 0.0 9e-06
GO:0005198 structural molecule activity 9.84% (6/61) 4.36 1e-06 3.6e-05
GO:0022625 cytosolic large ribosomal subunit 6.56% (4/61) 5.92 1e-06 3.9e-05
GO:0005840 ribosome 8.2% (5/61) 5.05 0.0 4e-05
GO:0015934 large ribosomal subunit 6.56% (4/61) 5.64 1e-06 7.5e-05
GO:0006412 translation 8.2% (5/61) 4.64 2e-06 8.7e-05
GO:0043043 peptide biosynthetic process 8.2% (5/61) 4.52 3e-06 0.00012
GO:0006518 peptide metabolic process 8.2% (5/61) 4.26 7e-06 0.000256
GO:0043228 non-membrane-bounded organelle 11.48% (7/61) 3.2 1.1e-05 0.000311
GO:0043232 intracellular non-membrane-bounded organelle 11.48% (7/61) 3.2 1.1e-05 0.000333
GO:0043604 amide biosynthetic process 8.2% (5/61) 4.13 1.1e-05 0.000341
GO:0008152 metabolic process 39.34% (24/61) 1.29 1.1e-05 0.000364
GO:0043603 amide metabolic process 8.2% (5/61) 3.7 4.4e-05 0.001109
GO:0005575 cellular_component 42.62% (26/61) 1.09 4.8e-05 0.00115
GO:0006807 nitrogen compound metabolic process 31.15% (19/61) 1.37 6.6e-05 0.001495
GO:1901564 organonitrogen compound metabolic process 24.59% (15/61) 1.57 0.000106 0.002275
GO:0009059 macromolecule biosynthetic process 9.84% (6/61) 2.96 0.000124 0.002295
GO:1901566 organonitrogen compound biosynthetic process 9.84% (6/61) 2.99 0.000113 0.00231
GO:0019538 protein metabolic process 21.31% (13/61) 1.72 0.000124 0.0024
GO:0044237 cellular metabolic process 29.51% (18/61) 1.33 0.000153 0.0027
GO:0071704 organic substance metabolic process 34.43% (21/61) 1.17 0.000174 0.002954
GO:0043170 macromolecule metabolic process 27.87% (17/61) 1.36 0.000201 0.003275
GO:0009523 photosystem II 3.28% (2/61) 6.57 0.000213 0.003338
GO:0044238 primary metabolic process 32.79% (20/61) 1.19 0.000227 0.003424
GO:0044271 cellular nitrogen compound biosynthetic process 9.84% (6/61) 2.69 0.000335 0.004546
GO:0043226 organelle 22.95% (14/61) 1.49 0.000326 0.00457
GO:0034641 cellular nitrogen compound metabolic process 18.03% (11/61) 1.75 0.000353 0.004641
GO:0043229 intracellular organelle 22.95% (14/61) 1.49 0.000325 0.004729
GO:0019005 SCF ubiquitin ligase complex 3.28% (2/61) 5.88 0.000552 0.007015
GO:0009521 photosystem 3.28% (2/61) 5.82 0.000598 0.007378
GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process 3.28% (2/61) 5.73 0.000675 0.008085
GO:0022627 cytosolic small ribosomal subunit 3.28% (2/61) 5.66 0.00075 0.008716
GO:0008150 biological_process 47.54% (29/61) 0.77 0.000817 0.009237
GO:0009987 cellular process 36.07% (22/61) 0.97 0.000859 0.009451
GO:0098796 membrane protein complex 6.56% (4/61) 3.23 0.000906 0.009698
GO:0015979 photosynthesis 3.28% (2/61) 5.43 0.00103 0.010744
GO:0015935 small ribosomal subunit 3.28% (2/61) 5.23 0.001342 0.012415
GO:0018117 protein adenylylation 1.64% (1/61) 9.57 0.001319 0.012483
GO:0070733 AMPylase activity 1.64% (1/61) 9.57 0.001319 0.012483
GO:0018175 protein nucleotidylation 1.64% (1/61) 9.57 0.001319 0.012483
GO:0005740 mitochondrial envelope 1.64% (1/61) 9.46 0.00142 0.012845
GO:0110165 cellular anatomical entity 34.43% (21/61) 0.96 0.001274 0.01296
GO:0044249 cellular biosynthetic process 11.48% (7/61) 1.93 0.002364 0.020469
GO:0098800 inner mitochondrial membrane protein complex 3.28% (2/61) 4.83 0.002323 0.020553
GO:0004663 Rab geranylgeranyltransferase activity 1.64% (1/61) 8.36 0.003041 0.024753
GO:0005688 U6 snRNP 1.64% (1/61) 8.36 0.003041 0.024753
GO:0042721 TIM22 mitochondrial import inner membrane insertion complex 1.64% (1/61) 8.36 0.003041 0.024753
GO:0004639 phosphoribosylaminoimidazolesuccinocarboxamide synthase activity 1.64% (1/61) 8.22 0.003344 0.025683
GO:0042549 photosystem II stabilization 1.64% (1/61) 8.22 0.003344 0.025683
GO:1902494 catalytic complex 8.2% (5/61) 2.32 0.003292 0.026275
GO:0036080 purine nucleotide-sugar transmembrane transporter activity 1.64% (1/61) 8.02 0.00385 0.027983
GO:0005457 GDP-fucose transmembrane transporter activity 1.64% (1/61) 8.02 0.00385 0.027983
GO:0048564 photosystem I assembly 1.64% (1/61) 7.98 0.003951 0.028214
GO:1901576 organic substance biosynthetic process 11.48% (7/61) 1.81 0.003756 0.028313
GO:0005751 mitochondrial respiratory chain complex IV 1.64% (1/61) 7.87 0.004255 0.029856
GO:0070180 large ribosomal subunit rRNA binding 1.64% (1/61) 7.81 0.004457 0.030745
GO:0045039 protein insertion into mitochondrial inner membrane 1.64% (1/61) 7.74 0.004659 0.031603
GO:0006605 protein targeting 3.28% (2/61) 4.23 0.005213 0.032641
GO:0009058 biosynthetic process 11.48% (7/61) 1.73 0.004974 0.03265
GO:0004661 protein geranylgeranyltransferase activity 1.64% (1/61) 7.59 0.005164 0.03284
GO:0005968 Rab-protein geranylgeranyltransferase complex 1.64% (1/61) 7.59 0.005164 0.03284
GO:0031461 cullin-RING ubiquitin ligase complex 3.28% (2/61) 4.27 0.004938 0.032948
GO:0098798 mitochondrial protein-containing complex 3.28% (2/61) 4.18 0.005593 0.033478
GO:0031975 envelope 3.28% (2/61) 4.18 0.005564 0.033797
GO:0031967 organelle envelope 3.28% (2/61) 4.18 0.005564 0.033797
GO:0045277 respiratory chain complex IV 1.64% (1/61) 7.41 0.005871 0.034629
GO:0006123 mitochondrial electron transport, cytochrome c to oxygen 1.64% (1/61) 7.36 0.006073 0.035308
GO:0004017 adenylate kinase activity 1.64% (1/61) 7.34 0.006174 0.035389
GO:0043467 regulation of generation of precursor metabolites and energy 1.64% (1/61) 7.22 0.006678 0.036728
GO:0042548 regulation of photosynthesis, light reaction 1.64% (1/61) 7.22 0.006678 0.036728
GO:0000398 mRNA splicing, via spliceosome 3.28% (2/61) 4.05 0.006593 0.037269
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 3.28% (2/61) 3.98 0.007316 0.038671
GO:0018344 protein geranylgeranylation 1.64% (1/61) 7.1 0.007283 0.039001
GO:0016925 protein sumoylation 1.64% (1/61) 7.1 0.007283 0.039001
GO:0008318 protein prenyltransferase activity 1.64% (1/61) 6.94 0.008089 0.041673
GO:0010109 regulation of photosynthesis 1.64% (1/61) 6.94 0.008089 0.041673
GO:0000375 RNA splicing, via transesterification reactions 3.28% (2/61) 3.86 0.008513 0.04331
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (61) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms